RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
DNMT1-221ENST00000589538 SPEF2Q9C093 1822 aa20.68■□□□□ 0.9
DNMT1-221ENST00000589538 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-221ENST00000589538 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 CCDC57Q2TAC2 916 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 TBC1D16Q8TBP0 767 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 POLLQ9UGP5 575 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 COL4A5P29400 1685 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 SCN4AP35499 1836 aa20.67■□□□□ 0.9
DNMT1-221ENST00000589538 UFL1O94874 794 aa20.66■□□□□ 0.9
DNMT1-221ENST00000589538 TAF7LQ5H9L4 462 aa20.66■□□□□ 0.9
DNMT1-221ENST00000589538 RBM46Q8TBY0 533 aaKnown RBP20.66■□□□□ 0.9
DNMT1-221ENST00000589538 SUCLG2Q96I99 432 aa20.66■□□□□ 0.9
DNMT1-221ENST00000589538 ZC3H12CQ9C0D7 883 aaKnown RBP20.66■□□□□ 0.9
DNMT1-221ENST00000589538 ANKRD2Q9GZV1 360 aa20.66■□□□□ 0.9
DNMT1-221ENST00000589538 USP44Q9H0E7 712 aa20.66■□□□□ 0.9
DNMT1-221ENST00000589538 MINPP1Q9UNW1 487 aa20.66■□□□□ 0.9
DNMT1-221ENST00000589538 BCAR3O75815 825 aa20.65■□□□□ 0.9
DNMT1-221ENST00000589538 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
DNMT1-221ENST00000589538 RABL6Q3YEC7 729 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-221ENST00000589538 EPHA10Q5JZY3 1008 aa20.64■□□□□ 0.89
DNMT1-221ENST00000589538 POTECB2RU33 542 aa20.63■□□□□ 0.89
DNMT1-221ENST00000589538 G3V3G9 751 aa20.63■□□□□ 0.89
DNMT1-221ENST00000589538 TNIP1Q15025 636 aa20.63■□□□□ 0.89
DNMT1-221ENST00000589538 DCAF8Q5TAQ9 597 aa20.63■□□□□ 0.89
DNMT1-221ENST00000589538 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
DNMT1-221ENST00000589538 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-221ENST00000589538 LEMD3Q9Y2U8 911 aa20.63■□□□□ 0.89
DNMT1-221ENST00000589538 GJA3Q9Y6H8 435 aa20.63■□□□□ 0.89
DNMT1-221ENST00000589538 UBTFL1P0CB47 393 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-221ENST00000589538 FSTL1Q12841 308 aa20.62■□□□□ 0.89
DNMT1-221ENST00000589538 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
DNMT1-221ENST00000589538 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
DNMT1-221ENST00000589538 BICC1Q9H694 974 aaKnown RBP20.62■□□□□ 0.89
DNMT1-221ENST00000589538 RIMBP2O15034 1052 aa20.61■□□□□ 0.89
DNMT1-221ENST00000589538 TRIM27P14373 513 aa20.61■□□□□ 0.89
DNMT1-221ENST00000589538 LMOD1P29536 600 aaPredicted RBP20.61■□□□□ 0.89
DNMT1-221ENST00000589538 CXCL9Q07325 125 aa20.61■□□□□ 0.89
DNMT1-221ENST00000589538 CIAPIN1Q6FI81 312 aa20.61■□□□□ 0.89
DNMT1-221ENST00000589538 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
DNMT1-221ENST00000589538 HACL1Q9UJ83 578 aa20.61■□□□□ 0.89
DNMT1-221ENST00000589538 SMC1BQ8NDV3 1235 aa20.6■□□□□ 0.89
DNMT1-221ENST00000589538 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 ECE2O60344 883 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 GNAI3P08754 354 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 CHRNDQ07001 517 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 ANKRD44Q8N8A2 993 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 TAF1DQ9H5J8 278 aaPredicted RBP20.59■□□□□ 0.89
DNMT1-221ENST00000589538 DBNDD1Q9H9R9 158 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
DNMT1-221ENST00000589538 KCNJ4P48050 445 aa20.58■□□□□ 0.89
DNMT1-221ENST00000589538 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.89
DNMT1-221ENST00000589538 ZNF804BA4D1E1 1349 aa20.57■□□□□ 0.88
DNMT1-221ENST00000589538 YDJCA8MPS7 323 aa20.57■□□□□ 0.88
DNMT1-221ENST00000589538 RAD17O75943 681 aa20.57■□□□□ 0.88
DNMT1-221ENST00000589538 EPHX2P34913 555 aa20.57■□□□□ 0.88
DNMT1-221ENST00000589538 DOK7Q18PE1 504 aa20.57■□□□□ 0.88
DNMT1-221ENST00000589538 PODNQ7Z5L7 613 aa20.56■□□□□ 0.88
DNMT1-221ENST00000589538 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
DNMT1-221ENST00000589538 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-221ENST00000589538 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-221ENST00000589538 A0A1B0GUL6 1792 aa20.55■□□□□ 0.88
DNMT1-221ENST00000589538 RPS12P25398 132 aaKnown RBP20.55■□□□□ 0.88
DNMT1-221ENST00000589538 SCNN1DP51172 638 aa20.55■□□□□ 0.88
DNMT1-221ENST00000589538 LDHDQ86WU2 507 aa20.55■□□□□ 0.88
DNMT1-221ENST00000589538 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
DNMT1-221ENST00000589538 COA1Q9GZY4 146 aa20.55■□□□□ 0.88
DNMT1-221ENST00000589538 MROH5Q6ZUA9 1318 aa20.54■□□□□ 0.88
DNMT1-221ENST00000589538 DPF2Q92785 391 aa20.54■□□□□ 0.88
DNMT1-221ENST00000589538 MEIS3Q99687 375 aa20.54■□□□□ 0.88
DNMT1-221ENST00000589538 GPRC5DQ9NZD1 345 aa20.54■□□□□ 0.88
DNMT1-221ENST00000589538 PSMD14O00487 310 aa20.53■□□□□ 0.88
DNMT1-221ENST00000589538 MS4A1P11836 297 aa20.53■□□□□ 0.88
DNMT1-221ENST00000589538 HSPA6P17066 643 aa20.53■□□□□ 0.88
DNMT1-221ENST00000589538 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
DNMT1-221ENST00000589538 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
DNMT1-221ENST00000589538 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
DNMT1-221ENST00000589538 DZIP1LQ8IYY4 767 aaKnown RBP20.53■□□□□ 0.88
DNMT1-221ENST00000589538 ADARB2Q9NS39 739 aaKnown RBP20.53■□□□□ 0.88
DNMT1-221ENST00000589538 LRRFIP2Q9Y608 721 aaKnown RBP20.53■□□□□ 0.88
DNMT1-221ENST00000589538 PSME4Q14997 1843 aa20.53■□□□□ 0.88
DNMT1-221ENST00000589538 TAF5LO75529 589 aa20.52■□□□□ 0.88
DNMT1-221ENST00000589538 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
DNMT1-221ENST00000589538 EAPPQ56P03 285 aaPredicted RBP20.52■□□□□ 0.88
DNMT1-221ENST00000589538 USP50Q70EL3 339 aaPredicted RBP20.52■□□□□ 0.88
DNMT1-221ENST00000589538 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
DNMT1-221ENST00000589538 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
DNMT1-221ENST00000589538 H7C1D1 291 aa20.51■□□□□ 0.87
DNMT1-221ENST00000589538 EPS15P42566 896 aa20.51■□□□□ 0.87
DNMT1-221ENST00000589538 UBE4AQ14139 1066 aa20.51■□□□□ 0.87
DNMT1-221ENST00000589538 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
DNMT1-221ENST00000589538 HELBQ8NG08 1087 aaPredicted RBP20.51■□□□□ 0.87
DNMT1-221ENST00000589538 SCN9AQ15858 1988 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 USP17L3A6NCW0 530 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 USP17L4A6NCW7 530 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
DNMT1-221ENST00000589538 PLIN1O60240 522 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 GNAI2P04899 355 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 USP17L1Q7RTZ2 530 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms