RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 DEFB115Q30KQ5 88 aa18.71■□□□□ 0.59
DNMT1-217ENST00000589091 G2E3Q7L622 706 aa18.71■□□□□ 0.59
DNMT1-217ENST00000589091 ZC3H15Q8WU90 426 aaKnown RBP18.71■□□□□ 0.59
DNMT1-217ENST00000589091 DPF2Q92785 391 aa18.71■□□□□ 0.59
DNMT1-217ENST00000589091 JARID2Q92833 1246 aaPredicted RBP18.71■□□□□ 0.59
DNMT1-217ENST00000589091 CNOT7Q9UIV1 285 aaKnown RBP18.71■□□□□ 0.59
DNMT1-217ENST00000589091 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
DNMT1-217ENST00000589091 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
DNMT1-217ENST00000589091 ZNF646O15015 1829 aaPredicted RBP18.71■□□□□ 0.59
DNMT1-217ENST00000589091 XDHP47989 1333 aa18.71■□□□□ 0.59
DNMT1-217ENST00000589091 PSMD14O00487 310 aa18.7■□□□□ 0.58
DNMT1-217ENST00000589091 VAMP4O75379 141 aa18.7■□□□□ 0.58
DNMT1-217ENST00000589091 UFL1O94874 794 aa18.7■□□□□ 0.58
DNMT1-217ENST00000589091 RPS12P25398 132 aaKnown RBP18.7■□□□□ 0.58
DNMT1-217ENST00000589091 FKBP5Q13451 457 aaPredicted RBP18.7■□□□□ 0.58
DNMT1-217ENST00000589091 CWF19L2Q2TBE0 894 aaKnown RBP18.7■□□□□ 0.58
DNMT1-217ENST00000589091 MYH16Q9H6N6 1097 aa18.7■□□□□ 0.58
DNMT1-217ENST00000589091 PGAP2Q9UHJ9 254 aa18.7■□□□□ 0.58
DNMT1-217ENST00000589091 ABT1Q9ULW3 272 aaKnown RBP18.7■□□□□ 0.58
DNMT1-217ENST00000589091 G3V3G9 751 aa18.69■□□□□ 0.58
DNMT1-217ENST00000589091 VEGFBP49765 207 aa18.69■□□□□ 0.58
DNMT1-217ENST00000589091 EXOSC9Q06265 439 aaKnown RBP18.69■□□□□ 0.58
DNMT1-217ENST00000589091 DCAF8Q5TAQ9 597 aa18.69■□□□□ 0.58
DNMT1-217ENST00000589091 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
DNMT1-217ENST00000589091 TTLL11Q8NHH1 800 aa18.69■□□□□ 0.58
DNMT1-217ENST00000589091 DNAAF4Q8WXU2 420 aa18.69■□□□□ 0.58
DNMT1-217ENST00000589091 CCDC85AQ96PX6 553 aaPredicted RBP18.69■□□□□ 0.58
DNMT1-217ENST00000589091 H7C1W4 665 aa18.68■□□□□ 0.58
DNMT1-217ENST00000589091 ATP2B4P23634 1241 aa18.68■□□□□ 0.58
DNMT1-217ENST00000589091 UBE3BQ7Z3V4 1068 aa18.68■□□□□ 0.58
DNMT1-217ENST00000589091 MICALL2Q8IY33 904 aa18.68■□□□□ 0.58
DNMT1-217ENST00000589091 LINS1Q8NG48 757 aa18.68■□□□□ 0.58
DNMT1-217ENST00000589091 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
DNMT1-217ENST00000589091 ZNF609O15014 1411 aa18.67■□□□□ 0.58
DNMT1-217ENST00000589091 GCKRQ14397 625 aa18.67■□□□□ 0.58
DNMT1-217ENST00000589091 DOK7Q18PE1 504 aa18.67■□□□□ 0.58
DNMT1-217ENST00000589091 PCNTO95613 3336 aa18.66■□□□□ 0.58
DNMT1-217ENST00000589091 ECE1P42892 770 aa18.66■□□□□ 0.58
DNMT1-217ENST00000589091 COL13A1Q5TAT6 717 aaPredicted RBP18.66■□□□□ 0.58
DNMT1-217ENST00000589091 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
DNMT1-217ENST00000589091 TRPM4Q8TD43 1214 aa18.66■□□□□ 0.58
DNMT1-217ENST00000589091 GPR101Q96P66 508 aaPredicted RBP18.66■□□□□ 0.58
DNMT1-217ENST00000589091 GREM2Q9H772 168 aa18.66■□□□□ 0.58
DNMT1-217ENST00000589091 BSDC1Q9NW68 430 aaPredicted RBP18.66■□□□□ 0.58
DNMT1-217ENST00000589091 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
DNMT1-217ENST00000589091 TRAF5O00463 557 aa18.65■□□□□ 0.58
DNMT1-217ENST00000589091 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
DNMT1-217ENST00000589091 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
DNMT1-217ENST00000589091 AIDAQ96BJ3 306 aa18.65■□□□□ 0.58
DNMT1-217ENST00000589091 WDR33Q9C0J8 1336 aaKnown RBP18.65■□□□□ 0.58
DNMT1-217ENST00000589091 MED23Q9ULK4 1368 aa18.65■□□□□ 0.58
DNMT1-217ENST00000589091 IGHMBP2P38935 993 aaKnown RBP18.64■□□□□ 0.57
DNMT1-217ENST00000589091 GLIS2Q9BZE0 524 aaPredicted RBP18.64■□□□□ 0.57
DNMT1-217ENST00000589091 TLL2Q9Y6L7 1015 aa18.64■□□□□ 0.57
DNMT1-217ENST00000589091 ECM29Q5VYK3 1845 aa18.64■□□□□ 0.57
DNMT1-217ENST00000589091 SHTN1A0MZ66 631 aa18.63■□□□□ 0.57
DNMT1-217ENST00000589091 CASP7P55210 303 aa18.63■□□□□ 0.57
DNMT1-217ENST00000589091 FMR1Q06787 632 aaKnown RBP eCLIP18.63■□□□□ 0.571e-8■■□□□ 12.4
DNMT1-217ENST00000589091 CST9Q5W186 159 aa18.63■□□□□ 0.57
DNMT1-217ENST00000589091 PODNQ7Z5L7 613 aa18.63■□□□□ 0.57
DNMT1-217ENST00000589091 AGBL3Q8NEM8 1001 aa18.63■□□□□ 0.57
DNMT1-217ENST00000589091 MINPP1Q9UNW1 487 aa18.63■□□□□ 0.57
DNMT1-217ENST00000589091 AKAP11Q9UKA4 1901 aa18.62■□□□□ 0.57
DNMT1-217ENST00000589091 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
DNMT1-217ENST00000589091 MAP2K1Q02750 393 aaPredicted RBP18.62■□□□□ 0.57
DNMT1-217ENST00000589091 SAMD7Q7Z3H4 446 aa18.62■□□□□ 0.57
DNMT1-217ENST00000589091 TNS4Q8IZW8 715 aa18.62■□□□□ 0.57
DNMT1-217ENST00000589091 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
DNMT1-217ENST00000589091 KCNQ5Q9NR82 932 aa18.62■□□□□ 0.57
DNMT1-217ENST00000589091 FOXN1O15353 648 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 CSF1RP07333 972 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 ITGA6P23229 1130 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
DNMT1-217ENST00000589091 CCT4P50991 539 aaKnown RBP18.61■□□□□ 0.57
DNMT1-217ENST00000589091 TBC1D10BQ4KMP7 808 aaPredicted RBP18.61■□□□□ 0.57
DNMT1-217ENST00000589091 PAXIP1Q6ZW49 1069 aaPredicted RBP18.61■□□□□ 0.57
DNMT1-217ENST00000589091 HHIPL1Q96JK4 782 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 CAPNS2Q96L46 248 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
DNMT1-217ENST00000589091 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
DNMT1-217ENST00000589091 RSBN1LQ6PCB5 846 aaPredicted RBP18.6■□□□□ 0.57
DNMT1-217ENST00000589091 DCPSQ96C86 337 aaKnown RBP18.6■□□□□ 0.57
DNMT1-217ENST00000589091 ANKRD2Q9GZV1 360 aa18.6■□□□□ 0.57
DNMT1-217ENST00000589091 PRDM10Q9NQV6 1147 aa18.6■□□□□ 0.57
DNMT1-217ENST00000589091 ZNF521Q96K83 1311 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 USP17L3A6NCW0 530 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 USP17L4A6NCW7 530 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 BEND3Q5T5X7 828 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 USP17L1Q7RTZ2 530 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 SAPCD2Q86UD0 394 aa18.59■□□□□ 0.57
DNMT1-217ENST00000589091 ANKRD18BA2A2Z9 1011 aa18.58■□□□□ 0.56
DNMT1-217ENST00000589091 RBM26Q5T8P6 1007 aaKnown RBP18.58■□□□□ 0.56
DNMT1-217ENST00000589091 CYP4F22Q6NT55 531 aa18.58■□□□□ 0.56
DNMT1-217ENST00000589091 KRT26Q7Z3Y9 468 aa18.58■□□□□ 0.56
DNMT1-217ENST00000589091 COA1Q9GZY4 146 aa18.58■□□□□ 0.56
DNMT1-217ENST00000589091 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.56
DNMT1-217ENST00000589091 MYO3BQ8WXR4 1341 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms