RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 EVI5LQ96CN4 794 aa13.89□□□□□ -0.19
SMAD4-205ENST00000588745 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
SMAD4-205ENST00000588745 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
SMAD4-205ENST00000588745 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
SMAD4-205ENST00000588745 NRXN2Q9P2S2 1712 aa13.89□□□□□ -0.19
SMAD4-205ENST00000588745 NPHP1O15259 732 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 PDE8BO95263 885 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 TM4SF1P30408 202 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 TIMM10P62072 90 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
SMAD4-205ENST00000588745 EZH2Q15910 746 aaKnown RBP13.88□□□□□ -0.19
SMAD4-205ENST00000588745 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
SMAD4-205ENST00000588745 REC8O95072 547 aa13.87□□□□□ -0.19
SMAD4-205ENST00000588745 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
SMAD4-205ENST00000588745 PUM3Q15397 648 aaKnown RBP13.87□□□□□ -0.19
SMAD4-205ENST00000588745 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
SMAD4-205ENST00000588745 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
SMAD4-205ENST00000588745 CCDC24Q8N4L8 307 aa13.87□□□□□ -0.19
SMAD4-205ENST00000588745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD4-205ENST00000588745 XAGE2Q96GT9 111 aa13.87□□□□□ -0.19
SMAD4-205ENST00000588745 DDRGK1Q96HY6 314 aa13.87□□□□□ -0.19
SMAD4-205ENST00000588745 TAF1P21675 1872 aa13.87□□□□□ -0.19
SMAD4-205ENST00000588745 POLRMTO00411 1230 aaKnown RBP13.86□□□□□ -0.19
SMAD4-205ENST00000588745 SERPINB2P05120 415 aa13.86□□□□□ -0.19
SMAD4-205ENST00000588745 ADORA1P30542 326 aa13.86□□□□□ -0.19
SMAD4-205ENST00000588745 ST5P78524 1137 aa13.86□□□□□ -0.19
SMAD4-205ENST00000588745 DDR1Q08345 913 aa13.86□□□□□ -0.19
SMAD4-205ENST00000588745 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
SMAD4-205ENST00000588745 HAUS7Q99871 368 aa13.86□□□□□ -0.19
SMAD4-205ENST00000588745 FGFR2P21802 821 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 BAG6P46379 1132 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 SF3B2Q13435 895 aaKnown RBP13.85□□□□□ -0.19
SMAD4-205ENST00000588745 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 NLGN1Q8N2Q7 840 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 LPIN2Q92539 896 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 FSD1Q9BTV5 496 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
SMAD4-205ENST00000588745 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
SMAD4-205ENST00000588745 HIP1O00291 1037 aa13.84□□□□□ -0.19
SMAD4-205ENST00000588745 MSH5O43196 834 aa13.84□□□□□ -0.19
SMAD4-205ENST00000588745 IFIT1P09914 478 aaKnown RBP13.84□□□□□ -0.19
SMAD4-205ENST00000588745 CHRNDQ07001 517 aa13.84□□□□□ -0.19
SMAD4-205ENST00000588745 TTC39AQ5SRH9 613 aa13.84□□□□□ -0.19
SMAD4-205ENST00000588745 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
SMAD4-205ENST00000588745 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
SMAD4-205ENST00000588745 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
SMAD4-205ENST00000588745 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
SMAD4-205ENST00000588745 SLC5A1P13866 664 aa13.83□□□□□ -0.19
SMAD4-205ENST00000588745 SLC15A2Q16348 729 aa13.83□□□□□ -0.19
SMAD4-205ENST00000588745 DDX46Q7L014 1031 aaKnown RBP13.83□□□□□ -0.19
SMAD4-205ENST00000588745 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.19
SMAD4-205ENST00000588745 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.19
SMAD4-205ENST00000588745 USP26Q9BXU7 913 aa13.83□□□□□ -0.19
SMAD4-205ENST00000588745 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.19
SMAD4-205ENST00000588745 RAD50Q92878 1312 aa13.83□□□□□ -0.2
SMAD4-205ENST00000588745 SGSM2O43147 1006 aa13.83□□□□□ -0.2
SMAD4-205ENST00000588745 TAF5LO75529 589 aa13.83□□□□□ -0.2
SMAD4-205ENST00000588745 RPS8P62241 208 aaKnown RBP13.83□□□□□ -0.2
SMAD4-205ENST00000588745 EDC3Q96F86 508 aaKnown RBP13.83□□□□□ -0.2
SMAD4-205ENST00000588745 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
SMAD4-205ENST00000588745 IL25Q9H293 177 aa13.83□□□□□ -0.2
SMAD4-205ENST00000588745 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
SMAD4-205ENST00000588745 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
SMAD4-205ENST00000588745 AKAP11Q9UKA4 1901 aa13.82□□□□□ -0.2
SMAD4-205ENST00000588745 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
SMAD4-205ENST00000588745 GRAPQ13588 217 aa13.82□□□□□ -0.2
SMAD4-205ENST00000588745 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
SMAD4-205ENST00000588745 CWC27Q6UX04 472 aaKnown RBP13.82□□□□□ -0.2
SMAD4-205ENST00000588745 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
SMAD4-205ENST00000588745 GRAPLQ8TC17 118 aaPredicted RBP13.82□□□□□ -0.2
SMAD4-205ENST00000588745 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
SMAD4-205ENST00000588745 GOLIM4O00461 696 aa13.81□□□□□ -0.2
SMAD4-205ENST00000588745 ARID4AP29374 1257 aaPredicted RBP13.81□□□□□ -0.2
SMAD4-205ENST00000588745 NMIQ13287 307 aaPredicted RBP13.81□□□□□ -0.2
SMAD4-205ENST00000588745 CCDC102BQ68D86 513 aa13.81□□□□□ -0.2
SMAD4-205ENST00000588745 DEFB132Q7Z7B7 95 aa13.81□□□□□ -0.2
SMAD4-205ENST00000588745 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
SMAD4-205ENST00000588745 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
SMAD4-205ENST00000588745 MED23Q9ULK4 1368 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 UQCRFS1P1P0C7P4 283 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 PHKA1P46020 1223 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 UBE4AQ14139 1066 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 SCARF1Q14162 830 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 RPGRQ92834 1020 aaKnown RBP13.8□□□□□ -0.2
SMAD4-205ENST00000588745 SNRKQ9NRH2 765 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 LRRC37AA6NMS7 1700 aa13.8□□□□□ -0.2
SMAD4-205ENST00000588745 COL11A2P13942 1736 aaPredicted RBP13.8□□□□□ -0.2
SMAD4-205ENST00000588745 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 KLRG2A4D1S0 409 aaPredicted RBP13.79□□□□□ -0.2
SMAD4-205ENST00000588745 SNAP23O00161 211 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 MMP10P09238 476 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 MCAMP43121 646 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
SMAD4-205ENST00000588745 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 KIF2CQ99661 725 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 ANKRD2Q9GZV1 360 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms