RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
TMED1-202ENST00000586835 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
TMED1-202ENST00000586835 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
TMED1-202ENST00000586835 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
TMED1-202ENST00000586835 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
TMED1-202ENST00000586835 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
TMED1-202ENST00000586835 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
TMED1-202ENST00000586835 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
TMED1-202ENST00000586835 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
TMED1-202ENST00000586835 CIAO1O76071 339 aa17.2■□□□□ 0.34
TMED1-202ENST00000586835 CTSWP56202 376 aa17.2■□□□□ 0.34
TMED1-202ENST00000586835 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.34
TMED1-202ENST00000586835 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
TMED1-202ENST00000586835 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
TMED1-202ENST00000586835 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
TMED1-202ENST00000586835 EXOC6BQ9Y2D4 811 aa17.2■□□□□ 0.34
TMED1-202ENST00000586835 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
TMED1-202ENST00000586835 BBOX1O75936 387 aa17.19■□□□□ 0.34
TMED1-202ENST00000586835 PDE4AP27815 886 aa17.19■□□□□ 0.34
TMED1-202ENST00000586835 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMED1-202ENST00000586835 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
TMED1-202ENST00000586835 DDX46Q7L014 1031 aaKnown RBP17.19■□□□□ 0.34
TMED1-202ENST00000586835 TTLL11Q8NHH1 800 aa17.19■□□□□ 0.34
TMED1-202ENST00000586835 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
TMED1-202ENST00000586835 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
TMED1-202ENST00000586835 GRIPAP1Q4V328 841 aa17.18■□□□□ 0.34
TMED1-202ENST00000586835 AOX1Q06278 1338 aa17.18■□□□□ 0.34
TMED1-202ENST00000586835 DICER1Q9UPY3 1922 aaKnown RBP17.17■□□□□ 0.34
TMED1-202ENST00000586835 RGS3P49796 1198 aa17.17■□□□□ 0.34
TMED1-202ENST00000586835 IFIT5Q13325 482 aaKnown RBP17.17■□□□□ 0.34
TMED1-202ENST00000586835 GRAPQ13588 217 aa17.17■□□□□ 0.34
TMED1-202ENST00000586835 CCDC57Q2TAC2 916 aa17.17■□□□□ 0.34
TMED1-202ENST00000586835 GRAPLQ8TC17 118 aaPredicted RBP17.17■□□□□ 0.34
TMED1-202ENST00000586835 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
TMED1-202ENST00000586835 ATP6V0A2Q9Y487 856 aa17.17■□□□□ 0.34
TMED1-202ENST00000586835 IL15P40933 162 aaPredicted RBP17.16■□□□□ 0.34
TMED1-202ENST00000586835 BMP2KLQ5H9B9 411 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 SLC51AQ86UW1 340 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 PLEKHM2Q8IWE5 1019 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 SP8Q8IXZ3 490 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 PSMD1Q99460 953 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
TMED1-202ENST00000586835 CEP350Q5VT06 3117 aa17.15■□□□□ 0.34
TMED1-202ENST00000586835 EYA2O00167 538 aa17.15■□□□□ 0.34
TMED1-202ENST00000586835 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
TMED1-202ENST00000586835 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
TMED1-202ENST00000586835 CLASRPQ8N2M8 674 aaKnown RBP17.15■□□□□ 0.34
TMED1-202ENST00000586835 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
TMED1-202ENST00000586835 TAF1P21675 1872 aa17.15■□□□□ 0.34
TMED1-202ENST00000586835 TIAM2Q8IVF5 1701 aa17.15■□□□□ 0.34
TMED1-202ENST00000586835 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
TMED1-202ENST00000586835 GLTPD2A6NH11 291 aa17.14■□□□□ 0.33
TMED1-202ENST00000586835 KIF3CO14782 793 aa17.14■□□□□ 0.33
TMED1-202ENST00000586835 TMC4Q7Z404 712 aa17.14■□□□□ 0.33
TMED1-202ENST00000586835 CELF1Q92879 486 aaKnown RBP17.14■□□□□ 0.33
TMED1-202ENST00000586835 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
TMED1-202ENST00000586835 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
TMED1-202ENST00000586835 SASH1O94885 1247 aa17.13■□□□□ 0.33
TMED1-202ENST00000586835 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
TMED1-202ENST00000586835 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
TMED1-202ENST00000586835 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
TMED1-202ENST00000586835 CHMP3Q9Y3E7 222 aa17.13■□□□□ 0.33
TMED1-202ENST00000586835 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
TMED1-202ENST00000586835 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
TMED1-202ENST00000586835 MX1P20591 662 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 ITGA6P23229 1130 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 PDE1AP54750 535 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
TMED1-202ENST00000586835 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 RTFDC1Q9BY42 306 aaPredicted RBP17.11■□□□□ 0.33
TMED1-202ENST00000586835 GREM2Q9H772 168 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 SEC31BQ9NQW1 1179 aa17.11■□□□□ 0.33
TMED1-202ENST00000586835 COL4A1P02462 1669 aa17.1■□□□□ 0.33
TMED1-202ENST00000586835 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
TMED1-202ENST00000586835 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
TMED1-202ENST00000586835 MPNDQ8N594 471 aa17.1■□□□□ 0.33
TMED1-202ENST00000586835 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
TMED1-202ENST00000586835 TAF7LQ5H9L4 462 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 DPP8Q6V1X1 898 aaPredicted RBP17.09■□□□□ 0.33
TMED1-202ENST00000586835 C16orf71Q8IYS4 520 aaPredicted RBP17.09■□□□□ 0.33
TMED1-202ENST00000586835 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
TMED1-202ENST00000586835 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 AKAP2Q9Y2D5 859 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 RIPOR2Q9Y4F9 1068 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
TMED1-202ENST00000586835 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
TMED1-202ENST00000586835 FZD9O00144 591 aa17.08■□□□□ 0.32
TMED1-202ENST00000586835 APBB1O00213 710 aa17.08■□□□□ 0.32
TMED1-202ENST00000586835 ERC2O15083 957 aa17.08■□□□□ 0.32
TMED1-202ENST00000586835 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
TMED1-202ENST00000586835 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
TMED1-202ENST00000586835 KLHDC4Q8TBB5 520 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms