RNA–Protein interactions for RNA: ENST00000585339.5

RANBP3-204, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-204ENST00000585339 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
RANBP3-204ENST00000585339 DOK7Q18PE1 504 aa9.97□□□□□ -0.81
RANBP3-204ENST00000585339 DDX46Q7L014 1031 aaKnown RBP9.97□□□□□ -0.81
RANBP3-204ENST00000585339 PNISRQ8TF01 805 aaKnown RBP9.97□□□□□ -0.81
RANBP3-204ENST00000585339 ZNF296Q8WUU4 475 aaPredicted RBP9.97□□□□□ -0.81
RANBP3-204ENST00000585339 SCAF8Q9UPN6 1271 aaKnown RBP9.97□□□□□ -0.81
RANBP3-204ENST00000585339 CUL9Q8IWT3 2517 aa9.97□□□□□ -0.81
RANBP3-204ENST00000585339 RPS12P25398 132 aaKnown RBP9.96□□□□□ -0.82
RANBP3-204ENST00000585339 NFE2L2Q16236 605 aa9.96□□□□□ -0.82
RANBP3-204ENST00000585339 WASHC4Q2M389 1173 aa9.96□□□□□ -0.82
RANBP3-204ENST00000585339 XAGE3Q8WTP9 111 aa9.96□□□□□ -0.82
RANBP3-204ENST00000585339 DCPSQ96C86 337 aaKnown RBP9.96□□□□□ -0.82
RANBP3-204ENST00000585339 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
RANBP3-204ENST00000585339 R3HDMLQ9H3Y0 253 aa9.96□□□□□ -0.82
RANBP3-204ENST00000585339 TRMT112Q9UI30 125 aaKnown RBP9.96□□□□□ -0.82
RANBP3-204ENST00000585339 SH3TC1Q8TE82 1336 aa9.96□□□□□ -0.82
RANBP3-204ENST00000585339 TBC1D8O95759 1140 aa9.95□□□□□ -0.82
RANBP3-204ENST00000585339 VIL1P09327 827 aaKnown RBP9.95□□□□□ -0.82
RANBP3-204ENST00000585339 EIF2S2P20042 333 aaKnown RBP9.95□□□□□ -0.82
RANBP3-204ENST00000585339 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
RANBP3-204ENST00000585339 KRT24Q2M2I5 525 aa9.95□□□□□ -0.82
RANBP3-204ENST00000585339 ANGEL2Q5VTE6 544 aaKnown RBP9.95□□□□□ -0.82
RANBP3-204ENST00000585339 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
RANBP3-204ENST00000585339 TBC1D16Q8TBP0 767 aa9.95□□□□□ -0.82
RANBP3-204ENST00000585339 NECTIN2Q92692 538 aa9.95□□□□□ -0.82
RANBP3-204ENST00000585339 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
RANBP3-204ENST00000585339 ARAP2Q8WZ64 1704 aa9.94□□□□□ -0.82
RANBP3-204ENST00000585339 SSC5DA1L4H1 1573 aa9.94□□□□□ -0.82
RANBP3-204ENST00000585339 ZNF280AP59817 542 aaPredicted RBP9.94□□□□□ -0.82
RANBP3-204ENST00000585339 AIMP1Q12904 312 aaKnown RBP9.94□□□□□ -0.82
RANBP3-204ENST00000585339 TMC4Q7Z404 712 aa9.94□□□□□ -0.82
RANBP3-204ENST00000585339 SULF1Q8IWU6 871 aa9.94□□□□□ -0.82
RANBP3-204ENST00000585339 GMLQ99445 158 aa9.94□□□□□ -0.82
RANBP3-204ENST00000585339 TSPYL4Q9UJ04 414 aa9.94□□□□□ -0.82
RANBP3-204ENST00000585339 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
RANBP3-204ENST00000585339 SCARF1Q14162 830 aa9.93□□□□□ -0.82
RANBP3-204ENST00000585339 SF3B3Q15393 1217 aaKnown RBP9.93□□□□□ -0.82
RANBP3-204ENST00000585339 HSP90AB3PQ58FF7 597 aa9.93□□□□□ -0.82
RANBP3-204ENST00000585339 HABP4Q5JVS0 413 aaKnown RBP9.93□□□□□ -0.82
RANBP3-204ENST00000585339 FAM89AQ96GI7 184 aa9.93□□□□□ -0.82
RANBP3-204ENST00000585339 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
RANBP3-204ENST00000585339 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
RANBP3-204ENST00000585339 UBE2Q2LH0YL09 131 aa9.92□□□□□ -0.82
RANBP3-204ENST00000585339 GPR25O00155 361 aa9.92□□□□□ -0.82
RANBP3-204ENST00000585339 PRAMEF18Q5VWM3 479 aa9.92□□□□□ -0.82
RANBP3-204ENST00000585339 SEC31BQ9NQW1 1179 aa9.92□□□□□ -0.82
RANBP3-204ENST00000585339 PODXL2Q9NZ53 605 aa9.92□□□□□ -0.82
RANBP3-204ENST00000585339 PITPNM2Q9BZ72 1349 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 WTIPA6NIX2 430 aaPredicted RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 FKBP1BP68106 108 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 CAP1Q01518 475 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 MKRN3Q13064 507 aaKnown RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 PKN2Q16513 984 aaKnown RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 NOM1Q5C9Z4 860 aaKnown RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 RTL5Q5HYW3 569 aaPredicted RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 FBXO46Q6PJ61 603 aaPredicted RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
RANBP3-204ENST00000585339 MYOZ2Q9NPC6 264 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 CHPF2Q9P2E5 772 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 HDAC9Q9UKV0 1011 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 ALPK3Q96L96 1907 aa9.91□□□□□ -0.82
RANBP3-204ENST00000585339 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 UFL1O94874 794 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 TM4SF4P48230 202 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 FXR1P51114 621 aaKnown RBP eCLIP9.9□□□□□ -0.82
RANBP3-204ENST00000585339 NBPF9Q3BBW0 867 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 AGBL3Q8NEM8 1001 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 EYA3Q99504 573 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 MXD3Q9BW11 206 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 CFHR5Q9BXR6 569 aa9.9□□□□□ -0.82
RANBP3-204ENST00000585339 CCER1Q8TC90 406 aaPredicted RBP9.89□□□□□ -0.83
RANBP3-204ENST00000585339 FZD1Q9UP38 647 aa9.89□□□□□ -0.83
RANBP3-204ENST00000585339 MGAMO43451 1857 aa9.89□□□□□ -0.83
RANBP3-204ENST00000585339 IRS4O14654 1257 aaPredicted RBP9.88□□□□□ -0.83
RANBP3-204ENST00000585339 USP17L8P0C7I0 530 aa9.88□□□□□ -0.83
RANBP3-204ENST00000585339 RPS8P62241 208 aaKnown RBP9.88□□□□□ -0.83
RANBP3-204ENST00000585339 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
RANBP3-204ENST00000585339 UNC80Q8N2C7 3258 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 CACNA1FO60840 1977 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 FKTNO75072 461 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 SASH1O94885 1247 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 PTPN12Q05209 780 aaKnown RBP9.87□□□□□ -0.83
RANBP3-204ENST00000585339 OTOP1Q7RTM1 612 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 GCC1Q96CN9 775 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 ZC3H12CQ9C0D7 883 aaKnown RBP9.87□□□□□ -0.83
RANBP3-204ENST00000585339 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 MED23Q9ULK4 1368 aa9.87□□□□□ -0.83
RANBP3-204ENST00000585339 COL1A1P02452 1464 aaPredicted RBP9.86□□□□□ -0.83
RANBP3-204ENST00000585339 IGF2BP3O00425 579 aaKnown RBP eCLIP9.86□□□□□ -0.83
RANBP3-204ENST00000585339 WNT10BO00744 389 aa9.86□□□□□ -0.83
RANBP3-204ENST00000585339 RIPK4P57078 832 aa9.86□□□□□ -0.83
RANBP3-204ENST00000585339 DACT2Q5SW24 774 aa9.86□□□□□ -0.83
RANBP3-204ENST00000585339 XDHP47989 1333 aa9.85□□□□□ -0.83
RANBP3-204ENST00000585339 USP17L3A6NCW0 530 aa9.85□□□□□ -0.83
RANBP3-204ENST00000585339 USP17L4A6NCW7 530 aa9.85□□□□□ -0.83
RANBP3-204ENST00000585339 CHL1O00533 1208 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms