RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
ERBB2-220ENST00000584684 UFL1O94874 794 aa16.71■□□□□ 0.27
ERBB2-220ENST00000584684 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-220ENST00000584684 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-220ENST00000584684 USP50Q70EL3 339 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-220ENST00000584684 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
ERBB2-220ENST00000584684 A0A1B0GUL6 1792 aa16.71■□□□□ 0.27
ERBB2-220ENST00000584684 GRM8O00222 908 aa16.7■□□□□ 0.26
ERBB2-220ENST00000584684 EPS15P42566 896 aa16.7■□□□□ 0.26
ERBB2-220ENST00000584684 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
ERBB2-220ENST00000584684 ALDH1L2Q3SY69 923 aa16.7■□□□□ 0.26
ERBB2-220ENST00000584684 MRPL50Q8N5N7 158 aaKnown RBP16.7■□□□□ 0.26
ERBB2-220ENST00000584684 KLRG1Q96E93 195 aa16.7■□□□□ 0.26
ERBB2-220ENST00000584684 MED23Q9ULK4 1368 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 ECE2O60344 883 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 RAD17O75943 681 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 ITGBL1O95965 494 aaPredicted RBP16.69■□□□□ 0.26
ERBB2-220ENST00000584684 ITGA6P23229 1130 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 GMPSP49915 693 aaPredicted RBP16.69■□□□□ 0.26
ERBB2-220ENST00000584684 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 ADARB2Q9NS39 739 aaKnown RBP16.69■□□□□ 0.26
ERBB2-220ENST00000584684 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
ERBB2-220ENST00000584684 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
ERBB2-220ENST00000584684 HTRA3P83110 453 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 FOXO4P98177 505 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 DPF2Q92785 391 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 ZC3H12CQ9C0D7 883 aaKnown RBP16.68■□□□□ 0.26
ERBB2-220ENST00000584684 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 PCNTO95613 3336 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-220ENST00000584684 UTYO14607 1347 aa16.68■□□□□ 0.26
ERBB2-220ENST00000584684 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
ERBB2-220ENST00000584684 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
ERBB2-220ENST00000584684 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
ERBB2-220ENST00000584684 GPR101Q96P66 508 aaPredicted RBP16.67■□□□□ 0.26
ERBB2-220ENST00000584684 PSMD14O00487 310 aa16.66■□□□□ 0.26
ERBB2-220ENST00000584684 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
ERBB2-220ENST00000584684 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
ERBB2-220ENST00000584684 BCL2L13Q9BXK5 485 aa16.66■□□□□ 0.26
ERBB2-220ENST00000584684 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
ERBB2-220ENST00000584684 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
ERBB2-220ENST00000584684 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
ERBB2-220ENST00000584684 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
ERBB2-220ENST00000584684 SLC4A10Q6U841 1118 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 C9orf78Q9NZ63 289 aaPredicted RBP16.65■□□□□ 0.26
ERBB2-220ENST00000584684 PGAP2Q9UHJ9 254 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 LEMD3Q9Y2U8 911 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 TRPM7Q96QT4 1865 aa16.65■□□□□ 0.26
ERBB2-220ENST00000584684 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
ERBB2-220ENST00000584684 IFIT5Q13325 482 aaKnown RBP16.64■□□□□ 0.25
ERBB2-220ENST00000584684 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
ERBB2-220ENST00000584684 MPHOSPH8Q99549 860 aa16.64■□□□□ 0.25
ERBB2-220ENST00000584684 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
ERBB2-220ENST00000584684 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
ERBB2-220ENST00000584684 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
ERBB2-220ENST00000584684 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
ERBB2-220ENST00000584684 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
ERBB2-220ENST00000584684 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
ERBB2-220ENST00000584684 TMEM88BA6NKF7 163 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 G3V3G9 751 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 H7C1D1 291 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 MIER1Q8N108 512 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 KCNQ5Q9NR82 932 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 ZBTB12Q9Y330 459 aaPredicted RBP16.62■□□□□ 0.25
ERBB2-220ENST00000584684 CNTNAP1P78357 1384 aa16.62■□□□□ 0.25
ERBB2-220ENST00000584684 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
ERBB2-220ENST00000584684 CHRNDQ07001 517 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
ERBB2-220ENST00000584684 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 TRPM4Q8TD43 1214 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 KAZALD1Q96I82 304 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
ERBB2-220ENST00000584684 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
ERBB2-220ENST00000584684 HIRAP54198 1017 aaPredicted RBP16.6■□□□□ 0.25
ERBB2-220ENST00000584684 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
ERBB2-220ENST00000584684 C15orf52Q6ZUT6 534 aaKnown RBP16.6■□□□□ 0.25
ERBB2-220ENST00000584684 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
ERBB2-220ENST00000584684 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
ERBB2-220ENST00000584684 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-220ENST00000584684 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 GMLQ99445 158 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
ERBB2-220ENST00000584684 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
ERBB2-220ENST00000584684 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
ERBB2-220ENST00000584684 USP44Q9H0E7 712 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms