RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZC3H12CQ9C0D7 883 aaKnown RBP25.89■■□□□ 1.74
SS18-224ENST00000584083 SRCIN1Q9C0H9 1055 aa25.89■■□□□ 1.74
SS18-224ENST00000584083 C9orf78Q9NZ63 289 aaPredicted RBP25.89■■□□□ 1.74
SS18-224ENST00000584083 CEP350Q5VT06 3117 aa25.89■■□□□ 1.73
SS18-224ENST00000584083 GRM8O00222 908 aa25.88■■□□□ 1.73
SS18-224ENST00000584083 ALDH1L1O75891 902 aa25.88■■□□□ 1.73
SS18-224ENST00000584083 FAM161AQ3B820 660 aa25.88■■□□□ 1.73
SS18-224ENST00000584083 DBNDD1Q9H9R9 158 aa25.88■■□□□ 1.73
SS18-224ENST00000584083 G3V3G9 751 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 CSF1RP07333 972 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 ITGA6P23229 1130 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 IGHMBP2P38935 993 aaKnown RBP25.87■■□□□ 1.73
SS18-224ENST00000584083 SCNN1DP51172 638 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 DOK7Q18PE1 504 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 DCAF8Q5TAQ9 597 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 BSDC1Q9NW68 430 aaPredicted RBP25.87■■□□□ 1.73
SS18-224ENST00000584083 PTPRCP08575 1304 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 XDHP47989 1333 aa25.87■■□□□ 1.73
SS18-224ENST00000584083 YDJCA8MPS7 323 aa25.86■■□□□ 1.73
SS18-224ENST00000584083 EPS15P42566 896 aa25.86■■□□□ 1.73
SS18-224ENST00000584083 HTRA3P83110 453 aa25.86■■□□□ 1.73
SS18-224ENST00000584083 ALDH1L2Q3SY69 923 aa25.86■■□□□ 1.73
SS18-224ENST00000584083 SMC4Q9NTJ3 1288 aa25.86■■□□□ 1.73
SS18-224ENST00000584083 CHMP3Q9Y3E7 222 aa25.86■■□□□ 1.73
SS18-224ENST00000584083 MINPP1Q9UNW1 487 aa25.85■■□□□ 1.73
SS18-224ENST00000584083 ECE2O60344 883 aa25.84■■□□□ 1.73
SS18-224ENST00000584083 ATP2B4P23634 1241 aa25.84■■□□□ 1.73
SS18-224ENST00000584083 GMPSP49915 693 aaPredicted RBP25.84■■□□□ 1.73
SS18-224ENST00000584083 FOXO4P98177 505 aa25.84■■□□□ 1.73
SS18-224ENST00000584083 MPHOSPH8Q99549 860 aa25.84■■□□□ 1.73
SS18-224ENST00000584083 GPRC5DQ9NZD1 345 aa25.84■■□□□ 1.73
SS18-224ENST00000584083 ANKRD18BA2A2Z9 1011 aa25.83■■□□□ 1.73
SS18-224ENST00000584083 CT47B1P0C2W7 299 aaPredicted RBP25.83■■□□□ 1.73
SS18-224ENST00000584083 IFIT5Q13325 482 aaKnown RBP25.82■■□□□ 1.72
SS18-224ENST00000584083 LMBR1LQ6UX01 489 aa25.82■■□□□ 1.72
SS18-224ENST00000584083 ADAMTSL1Q8N6G6 1762 aa25.81■■□□□ 1.72
SS18-224ENST00000584083 HNRNPUQ00839 825 aaKnown RBP eCLIP25.8■■□□□ 1.72
SS18-224ENST00000584083 EPHA10Q5JZY3 1008 aa25.8■■□□□ 1.72
SS18-224ENST00000584083 USP50Q70EL3 339 aaPredicted RBP25.8■■□□□ 1.72
SS18-224ENST00000584083 ADARB2Q9NS39 739 aaKnown RBP25.8■■□□□ 1.72
SS18-224ENST00000584083 PSMD14O00487 310 aa25.79■■□□□ 1.72
SS18-224ENST00000584083 CCT4P50991 539 aaKnown RBP25.79■■□□□ 1.72
SS18-224ENST00000584083 MAP1SQ66K74 1059 aaPredicted RBP25.79■■□□□ 1.72
SS18-224ENST00000584083 DNAJC5GQ8N7S2 189 aa25.79■■□□□ 1.72
SS18-224ENST00000584083 ANKRD2Q9GZV1 360 aa25.79■■□□□ 1.72
SS18-224ENST00000584083 KCNQ5Q9NR82 932 aa25.79■■□□□ 1.72
SS18-224ENST00000584083 WTIPA6NIX2 430 aaPredicted RBP25.78■■□□□ 1.72
SS18-224ENST00000584083 CCDC57Q2TAC2 916 aa25.78■■□□□ 1.72
SS18-224ENST00000584083 TAF7LQ5H9L4 462 aa25.78■■□□□ 1.72
SS18-224ENST00000584083 CNTROBQ8N137 903 aa25.78■■□□□ 1.72
SS18-224ENST00000584083 ZBTB12Q9Y330 459 aaPredicted RBP25.78■■□□□ 1.72
SS18-224ENST00000584083 SCN9AQ15858 1988 aa25.78■■□□□ 1.72
SS18-224ENST00000584083 NBPF7P0C2Y1 421 aaPredicted RBP25.77■■□□□ 1.72
SS18-224ENST00000584083 SUCLG2Q96I99 432 aa25.77■■□□□ 1.72
SS18-224ENST00000584083 CNOT7Q9UIV1 285 aaKnown RBP25.77■■□□□ 1.72
SS18-224ENST00000584083 H7C1D1 291 aa25.76■■□□□ 1.71
SS18-224ENST00000584083 ITGBL1O95965 494 aaPredicted RBP25.76■■□□□ 1.71
SS18-224ENST00000584083 LEMD3Q9Y2U8 911 aa25.76■■□□□ 1.71
SS18-224ENST00000584083 UTYO14607 1347 aa25.75■■□□□ 1.71
SS18-224ENST00000584083 NOB1Q9ULX3 412 aaKnown RBP25.75■■□□□ 1.71
SS18-224ENST00000584083 MED23Q9ULK4 1368 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 ZNF804BA4D1E1 1349 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 PASKQ96RG2 1323 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 KCNJ4P48050 445 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 CHRNDQ07001 517 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 MICALL2Q8IY33 904 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 DPF2Q92785 391 aa25.74■■□□□ 1.71
SS18-224ENST00000584083 SHTN1A0MZ66 631 aa25.73■■□□□ 1.71
SS18-224ENST00000584083 RPS12P25398 132 aaKnown RBP25.73■■□□□ 1.71
SS18-224ENST00000584083 RARSP54136 660 aaKnown RBP25.73■■□□□ 1.71
SS18-224ENST00000584083 KLRG1Q96E93 195 aa25.73■■□□□ 1.71
SS18-224ENST00000584083 ZNF594Q96JF6 807 aaPredicted RBP25.73■■□□□ 1.71
SS18-224ENST00000584083 VIL1P09327 827 aaKnown RBP25.72■■□□□ 1.71
SS18-224ENST00000584083 LDHAL6AQ6ZMR3 332 aa25.72■■□□□ 1.71
SS18-224ENST00000584083 PODNQ7Z5L7 613 aa25.72■■□□□ 1.71
SS18-224ENST00000584083 KAZALD1Q96I82 304 aa25.72■■□□□ 1.71
SS18-224ENST00000584083 PSME4Q14997 1843 aa25.72■■□□□ 1.71
SS18-224ENST00000584083 HELBQ8NG08 1087 aaPredicted RBP25.71■■□□□ 1.71
SS18-224ENST00000584083 API5Q9BZZ5 524 aaKnown RBP25.71■■□□□ 1.71
SS18-224ENST00000584083 USP44Q9H0E7 712 aa25.71■■□□□ 1.71
SS18-224ENST00000584083 BICC1Q9H694 974 aaKnown RBP25.71■■□□□ 1.71
SS18-224ENST00000584083 CNNM1Q9NRU3 951 aa25.71■■□□□ 1.71
SS18-224ENST00000584083 CREBZFQ9NS37 354 aa25.71■■□□□ 1.71
SS18-224ENST00000584083 TAF5LO75529 589 aa25.7■■□□□ 1.7
SS18-224ENST00000584083 BRPF1P55201 1214 aaPredicted RBP25.7■■□□□ 1.7
SS18-224ENST00000584083 TRPM4Q8TD43 1214 aa25.7■■□□□ 1.7
SS18-224ENST00000584083 A0A1B0GUL6 1792 aa25.69■■□□□ 1.7
SS18-224ENST00000584083 TXNRD3Q86VQ6 643 aa25.69■■□□□ 1.7
SS18-224ENST00000584083 USP17L3A6NCW0 530 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 USP17L4A6NCW7 530 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 TMEM88BA6NKF7 163 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 PLIN1O60240 522 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 HIRAP54198 1017 aaPredicted RBP25.68■■□□□ 1.7
SS18-224ENST00000584083 RSBN1LQ6PCB5 846 aaPredicted RBP25.68■■□□□ 1.7
SS18-224ENST00000584083 USP17L1Q7RTZ2 530 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 SAMD7Q7Z3H4 446 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 COA1Q9GZY4 146 aa25.68■■□□□ 1.7
SS18-224ENST00000584083 KIF16BQ96L93 1317 aa25.67■■□□□ 1.7
SS18-224ENST00000584083 KLRK1P26718 216 aa25.67■■□□□ 1.7
SS18-224ENST00000584083 TBC1D10BQ4KMP7 808 aaPredicted RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms