RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-230ENST00000584042 CLASRPQ8N2M8 674 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-230ENST00000584042 ATF5Q9Y2D1 282 aaPredicted RBP20.6■□□□□ 0.89
CDK5RAP3-230ENST00000584042 SALL3Q9BXA9 1300 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 LTBP1Q14766 1721 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 TFCP2Q12800 502 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 METTL24Q5JXM2 366 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 VGLL2Q8N8G2 317 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 MASTLQ96GX5 879 aa20.59■□□□□ 0.89
CDK5RAP3-230ENST00000584042 BRCA1P38398 1863 aaKnown RBP20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 PTGER2P43116 358 aa20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 TNNI3KQ59H18 835 aa20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 STYK1Q6J9G0 422 aa20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 C2CD5Q86YS7 1000 aa20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 CEP126Q9P2H0 1117 aa20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 FPGT-TNNI3KV9GXZ4 949 aa20.58■□□□□ 0.89
CDK5RAP3-230ENST00000584042 H0YIN7 160 aa20.57■□□□□ 0.88
CDK5RAP3-230ENST00000584042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP3-230ENST00000584042 AOX1Q06278 1338 aa20.56■□□□□ 0.88
CDK5RAP3-230ENST00000584042 RGS3P49796 1198 aa20.56■□□□□ 0.88
CDK5RAP3-230ENST00000584042 CHRNDQ07001 517 aa20.56■□□□□ 0.88
CDK5RAP3-230ENST00000584042 AACSQ86V21 672 aa20.56■□□□□ 0.88
CDK5RAP3-230ENST00000584042 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
CDK5RAP3-230ENST00000584042 AKAP2Q9Y2D5 859 aa20.56■□□□□ 0.88
CDK5RAP3-230ENST00000584042 BBOX1O75936 387 aa20.55■□□□□ 0.88
CDK5RAP3-230ENST00000584042 PDE8BO95263 885 aa20.55■□□□□ 0.88
CDK5RAP3-230ENST00000584042 ALDH1B1P30837 517 aa20.55■□□□□ 0.88
CDK5RAP3-230ENST00000584042 EAF2Q96CJ1 260 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-230ENST00000584042 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
CDK5RAP3-230ENST00000584042 PPEF1O14829 653 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 IFIT2P09913 472 aaKnown RBP20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 MX1P20591 662 aa20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 PUM3Q15397 648 aaKnown RBP20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
CDK5RAP3-230ENST00000584042 TTC41PQ6P2S7 1318 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 A0A1B0GUL7 405 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 ATP2B3Q16720 1220 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 PLEKHM2Q8IWE5 1019 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 CNKSR1Q969H4 720 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 OSBPL3Q9H4L5 887 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 CD2APQ9Y5K6 639 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 SLX4Q8IY92 1834 aa20.53■□□□□ 0.88
CDK5RAP3-230ENST00000584042 FGFR2P21802 821 aa20.52■□□□□ 0.88
CDK5RAP3-230ENST00000584042 CHRNA5P30532 468 aa20.52■□□□□ 0.88
CDK5RAP3-230ENST00000584042 PDE1AP54750 535 aa20.52■□□□□ 0.88
CDK5RAP3-230ENST00000584042 TGFB2P61812 414 aa20.52■□□□□ 0.88
CDK5RAP3-230ENST00000584042 C16orf71Q8IYS4 520 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-230ENST00000584042 DBNLQ9UJU6 430 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP3-230ENST00000584042 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
CDK5RAP3-230ENST00000584042 LPIN2Q92539 896 aa20.51■□□□□ 0.87
CDK5RAP3-230ENST00000584042 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.879e-13■■□□□ 12.1
CDK5RAP3-230ENST00000584042 XDHP47989 1333 aa20.51■□□□□ 0.87
CDK5RAP3-230ENST00000584042 SLC5A1P13866 664 aa20.5■□□□□ 0.87
CDK5RAP3-230ENST00000584042 UBE4AQ14139 1066 aa20.5■□□□□ 0.87
CDK5RAP3-230ENST00000584042 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
CDK5RAP3-230ENST00000584042 TLR7Q9NYK1 1049 aaKnown RBP20.5■□□□□ 0.87
CDK5RAP3-230ENST00000584042 ATP6V0A2Q9Y487 856 aa20.5■□□□□ 0.87
CDK5RAP3-230ENST00000584042 PRPF40BQ6NWY9 871 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-230ENST00000584042 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
CDK5RAP3-230ENST00000584042 DBNDD2Q9BQY9 259 aa20.49■□□□□ 0.87
CDK5RAP3-230ENST00000584042 CCDC8Q9H0W5 538 aaPredicted RBP20.49■□□□□ 0.87
CDK5RAP3-230ENST00000584042 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
CDK5RAP3-230ENST00000584042 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
CDK5RAP3-230ENST00000584042 TAF5LO75529 589 aa20.48■□□□□ 0.87
CDK5RAP3-230ENST00000584042 DPEP1P16444 411 aa20.48■□□□□ 0.87
CDK5RAP3-230ENST00000584042 TTC22Q5TAA0 569 aa20.48■□□□□ 0.87
CDK5RAP3-230ENST00000584042 HELBQ8NG08 1087 aaPredicted RBP20.48■□□□□ 0.87
CDK5RAP3-230ENST00000584042 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
CDK5RAP3-230ENST00000584042 ERC2O15083 957 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 IFIT1P09914 478 aaKnown RBP20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 PI4K2BQ8TCG2 481 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 XAGE2Q96GT9 111 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 NEUROD6Q96NK8 337 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 LEMD3Q9Y2U8 911 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 AK9Q5TCS8 1911 aa20.47■□□□□ 0.87
CDK5RAP3-230ENST00000584042 KCNA3P22001 575 aa20.46■□□□□ 0.87
CDK5RAP3-230ENST00000584042 KCNJ4P48050 445 aa20.46■□□□□ 0.87
CDK5RAP3-230ENST00000584042 TIMM10P62072 90 aa20.46■□□□□ 0.87
CDK5RAP3-230ENST00000584042 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
CDK5RAP3-230ENST00000584042 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
CDK5RAP3-230ENST00000584042 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
CDK5RAP3-230ENST00000584042 MYH13Q9UKX3 1938 aa20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 ADORA1P30542 326 aa20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 CC2D2BQ6DHV5 1058 aa20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 TMX4Q9H1E5 349 aaPredicted RBP20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 ANKIB1Q9P2G1 1089 aa20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 ZNF804BA4D1E1 1349 aa20.45■□□□□ 0.86
CDK5RAP3-230ENST00000584042 GSPT1P15170 499 aaKnown RBP20.44■□□□□ 0.86
CDK5RAP3-230ENST00000584042 ATP5JP18859 108 aa20.44■□□□□ 0.86
CDK5RAP3-230ENST00000584042 ATP2B4P23634 1241 aa20.44■□□□□ 0.86
CDK5RAP3-230ENST00000584042 GPSM2P81274 684 aa20.44■□□□□ 0.86
CDK5RAP3-230ENST00000584042 TSHZ3Q63HK5 1081 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms