RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	CHMP4B	Q9H444	224 aa	Known RBP	12.4	□□□□□ -0.42
NARF-222	ENST00000583908	PODXL2	Q9NZ53	605 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	SBF1	O95248	1867 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	DICER1	Q9UPY3	1922 aa	Known RBP	12.39	□□□□□ -0.43
NARF-222	ENST00000583908	IQCA1L	A6NCM1	817 aa		12.39	□□□□□ -0.43
NARF-222	ENST00000583908	KCNA4	P22459	653 aa		12.39	□□□□□ -0.43
NARF-222	ENST00000583908	FOXO4	P98177	505 aa		12.39	□□□□□ -0.43
NARF-222	ENST00000583908	KIAA2012	Q0VF49	1180 aa		12.39	□□□□□ -0.43
NARF-222	ENST00000583908	AOC3	Q16853	763 aa		12.39	□□□□□ -0.43
NARF-222	ENST00000583908	DZIP1L	Q8IYY4	767 aa	Known RBP	12.39	□□□□□ -0.43
NARF-222	ENST00000583908	BICC1	Q9H694	974 aa	Known RBP	12.39	□□□□□ -0.43
NARF-222	ENST00000583908	CNNM1	Q9NRU3	951 aa		12.39	□□□□□ -0.43
NARF-222	ENST00000583908	GPSM2	P81274	684 aa		12.38	□□□□□ -0.43
NARF-222	ENST00000583908	RABL6	Q3YEC7	729 aa	Predicted RBP	12.38	□□□□□ -0.43
NARF-222	ENST00000583908	LDHAL6A	Q6ZMR3	332 aa		12.38	□□□□□ -0.43
NARF-222	ENST00000583908	ITPRIP	Q8IWB1	547 aa		12.38	□□□□□ -0.43
NARF-222	ENST00000583908	USP44	Q9H0E7	712 aa		12.38	□□□□□ -0.43
NARF-222	ENST00000583908	LEMD3	Q9Y2U8	911 aa		12.38	□□□□□ -0.43
NARF-222	ENST00000583908	LMOD1	P29536	600 aa	Predicted RBP	12.37	□□□□□ -0.43
NARF-222	ENST00000583908	TNIP1	Q15025	636 aa		12.37	□□□□□ -0.43
NARF-222	ENST00000583908	GPC2	Q8N158	579 aa		12.37	□□□□□ -0.43
NARF-222	ENST00000583908	TBC1D16	Q8TBP0	767 aa		12.37	□□□□□ -0.43
NARF-222	ENST00000583908	CLUAP1	Q96AJ1	413 aa		12.37	□□□□□ -0.43
NARF-222	ENST00000583908	ZNRF3	Q9ULT6	936 aa		12.37	□□□□□ -0.43
NARF-222	ENST00000583908	MINPP1	Q9UNW1	487 aa		12.37	□□□□□ -0.43
NARF-222	ENST00000583908	DUOX1	Q9NRD9	1551 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	MED23	Q9ULK4	1368 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	FZD9	O00144	591 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	GNAI2	P04899	355 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	PRELP	P51888	382 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	CCDC88A	Q3V6T2	1871 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	MROH5	Q6ZUA9	1318 aa		12.36	□□□□□ -0.43
NARF-222	ENST00000583908	VEGFA	P15692	232 aa	Predicted RBP	12.35	□□□□□ -0.43
NARF-222	ENST00000583908	CHRND	Q07001	517 aa		12.35	□□□□□ -0.43
NARF-222	ENST00000583908	EPHA10	Q5JZY3	1008 aa		12.35	□□□□□ -0.43
NARF-222	ENST00000583908	TMEM57	Q8N5G2	664 aa		12.35	□□□□□ -0.43
NARF-222	ENST00000583908	MEIS3	Q99687	375 aa		12.35	□□□□□ -0.43
NARF-222	ENST00000583908	FBXO3	Q9UK99	471 aa		12.35	□□□□□ -0.43
NARF-222	ENST00000583908	ZNF804B	A4D1E1	1349 aa		12.35	□□□□□ -0.43
NARF-222	ENST00000583908	SPEF2	Q9C093	1822 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	RIMBP2	O15034	1052 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	CIAPIN1	Q6FI81	312 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	ANKRD44	Q8N8A2	993 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.34	□□□□□ -0.43
NARF-222	ENST00000583908	POLL	Q9UGP5	575 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	DDX19B	Q9UMR2	479 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	LRRFIP2	Q9Y608	721 aa	Known RBP	12.34	□□□□□ -0.43
NARF-222	ENST00000583908	GJA3	Q9Y6H8	435 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	ZNF541	Q9H0D2	1346 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	LTBP1	Q14766	1721 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	WDR90	Q96KV7	1748 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	TAF1	P21675	1872 aa		12.34	□□□□□ -0.43
NARF-222	ENST00000583908	ECE2	O60344	883 aa		12.33	□□□□□ -0.44
NARF-222	ENST00000583908	DDN	O94850	711 aa	Predicted RBP	12.33	□□□□□ -0.44
NARF-222	ENST00000583908	METTL24	Q5JXM2	366 aa		12.33	□□□□□ -0.44
NARF-222	ENST00000583908	ZNF804A	Q7Z570	1209 aa		12.33	□□□□□ -0.44
NARF-222	ENST00000583908	KAZALD1	Q96I82	304 aa		12.33	□□□□□ -0.44
NARF-222	ENST00000583908	COA1	Q9GZY4	146 aa		12.33	□□□□□ -0.44
NARF-222	ENST00000583908	SRGAP3	O43295	1099 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	TOMM70	O94826	608 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	PODN	Q7Z5L7	613 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	PNMA8A	Q86V59	439 aa	Predicted RBP	12.32	□□□□□ -0.44
NARF-222	ENST00000583908	DBNDD1	Q9H9R9	158 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	RRAGC	Q9HB90	399 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	NMRK2	Q9NPI5	230 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	HACL1	Q9UJ83	578 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	COL4A1	P02462	1669 aa		12.32	□□□□□ -0.44
NARF-222	ENST00000583908	PLIN1	O60240	522 aa		12.31	□□□□□ -0.44
NARF-222	ENST00000583908	CIAO1	O76071	339 aa		12.31	□□□□□ -0.44
NARF-222	ENST00000583908	RPS12	P25398	132 aa	Known RBP	12.31	□□□□□ -0.44
NARF-222	ENST00000583908	PDE3A	Q14432	1141 aa		12.31	□□□□□ -0.44
NARF-222	ENST00000583908	MVP	Q14764	893 aa	Known RBP	12.31	□□□□□ -0.44
NARF-222	ENST00000583908	SLC51A	Q86UW1	340 aa		12.31	□□□□□ -0.44
NARF-222	ENST00000583908	VPS37D	Q86XT2	251 aa		12.31	□□□□□ -0.44
NARF-222	ENST00000583908	RBM46	Q8TBY0	533 aa	Known RBP	12.31	□□□□□ -0.44
NARF-222	ENST00000583908	ZNF594	Q96JF6	807 aa	Predicted RBP	12.31	□□□□□ -0.44
NARF-222	ENST00000583908	SCN4A	P35499	1836 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	EYA2	O00167	538 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	KIF3C	O14782	793 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	RAD17	O75943	681 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	IL15	P40933	162 aa	Predicted RBP	12.3	□□□□□ -0.44
NARF-222	ENST00000583908	MTX1	Q13505	466 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	UBE4A	Q14139	1066 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	PUM3	Q15397	648 aa	Known RBP	12.3	□□□□□ -0.44
NARF-222	ENST00000583908	DOK7	Q18PE1	504 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	CAVIN4	Q5BKX8	364 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	SMC1B	Q8NDV3	1235 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	MYO3B	Q8WXR4	1341 aa		12.3	□□□□□ -0.44
NARF-222	ENST00000583908	COL4A5	P29400	1685 aa		12.29	□□□□□ -0.44
NARF-222	ENST00000583908	IFIT1	P09914	478 aa	Known RBP	12.29	□□□□□ -0.44
NARF-222	ENST00000583908	SLC5A1	P13866	664 aa		12.29	□□□□□ -0.44
NARF-222	ENST00000583908	EPHX2	P34913	555 aa		12.29	□□□□□ -0.44
NARF-222	ENST00000583908	CXCL9	Q07325	125 aa		12.29	□□□□□ -0.44
NARF-222	ENST00000583908	FSTL1	Q12841	308 aa		12.29	□□□□□ -0.44
NARF-222	ENST00000583908	C15orf52	Q6ZUT6	534 aa	Known RBP	12.29	□□□□□ -0.44
NARF-222	ENST00000583908	FBXW7	Q969H0	707 aa		12.29	□□□□□ -0.44
NARF-222	ENST00000583908	GPR101	Q96P66	508 aa	Predicted RBP	12.29	□□□□□ -0.44
NARF-222	ENST00000583908	USP17L3	A6NCW0	530 aa		12.28	□□□□□ -0.44
NARF-222	ENST00000583908	USP17L4	A6NCW7	530 aa		12.28	□□□□□ -0.44
NARF-222	ENST00000583908		H7C1D1	291 aa		12.28	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms