RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 TMEM88BA6NKF7 163 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
CRLF3-205ENST00000583805 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 ANXA1P04083 346 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
CRLF3-205ENST00000583805 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
CRLF3-205ENST00000583805 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 TRMT112Q9UI30 125 aaKnown RBP11.25□□□□□ -0.61
CRLF3-205ENST00000583805 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
CRLF3-205ENST00000583805 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
CRLF3-205ENST00000583805 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
CRLF3-205ENST00000583805 HSPA1AP0DMV8 641 aaKnown RBP11.24□□□□□ -0.61
CRLF3-205ENST00000583805 HSPA1BP0DMV9 641 aaKnown RBP11.24□□□□□ -0.61
CRLF3-205ENST00000583805 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
CRLF3-205ENST00000583805 GNAI1P63096 354 aa11.24□□□□□ -0.61
CRLF3-205ENST00000583805 GRAPQ13588 217 aa11.24□□□□□ -0.61
CRLF3-205ENST00000583805 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
CRLF3-205ENST00000583805 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
CRLF3-205ENST00000583805 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
CRLF3-205ENST00000583805 GRAPLQ8TC17 118 aaPredicted RBP11.24□□□□□ -0.61
CRLF3-205ENST00000583805 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
CRLF3-205ENST00000583805 AKAP11Q9UKA4 1901 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 PPP1R15BQ5SWA1 713 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
CRLF3-205ENST00000583805 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
CRLF3-205ENST00000583805 MPNDQ8N594 471 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
CRLF3-205ENST00000583805 ZNF853P0CG23 659 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 SCNN1DP51172 638 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
CRLF3-205ENST00000583805 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 CNTROBQ8N137 903 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 ZMYND15Q9H091 742 aa11.22□□□□□ -0.61
CRLF3-205ENST00000583805 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
CRLF3-205ENST00000583805 MKRN1Q9UHC7 482 aaKnown RBP11.22□□□□□ -0.61
CRLF3-205ENST00000583805 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
CRLF3-205ENST00000583805 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.61
CRLF3-205ENST00000583805 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
CRLF3-205ENST00000583805 HCLS1P14317 486 aaPredicted RBP11.21□□□□□ -0.61
CRLF3-205ENST00000583805 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.61
CRLF3-205ENST00000583805 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
CRLF3-205ENST00000583805 AOC3Q16853 763 aa11.21□□□□□ -0.61
CRLF3-205ENST00000583805 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
CRLF3-205ENST00000583805 ADARB2Q9NS39 739 aaKnown RBP11.21□□□□□ -0.61
CRLF3-205ENST00000583805 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
CRLF3-205ENST00000583805 TNIP1Q15025 636 aa11.2□□□□□ -0.62
CRLF3-205ENST00000583805 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
CRLF3-205ENST00000583805 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
CRLF3-205ENST00000583805 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
CRLF3-205ENST00000583805 GPRC5DQ9NZD1 345 aa11.2□□□□□ -0.62
CRLF3-205ENST00000583805 APAF1O14727 1248 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
CRLF3-205ENST00000583805 CXCL9Q07325 125 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 PDE4DQ08499 809 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 AIDAQ96BJ3 306 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 COL4A1P02462 1669 aa11.19□□□□□ -0.62
CRLF3-205ENST00000583805 IRS4O14654 1257 aaPredicted RBP11.18□□□□□ -0.62
CRLF3-205ENST00000583805 TRIM66O15016 1216 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 EPS15P42566 896 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 DEFB115Q30KQ5 88 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 CCDC30Q5VVM6 783 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 ZBTB38Q8NAP3 1195 aaPredicted RBP11.18□□□□□ -0.62
CRLF3-205ENST00000583805 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 EYA3Q99504 573 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 ZNF609O15014 1411 aa11.18□□□□□ -0.62
CRLF3-205ENST00000583805 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
CRLF3-205ENST00000583805 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
CRLF3-205ENST00000583805 ECE1P42892 770 aa11.17□□□□□ -0.62
CRLF3-205ENST00000583805 VEGFBP49765 207 aa11.17□□□□□ -0.62
CRLF3-205ENST00000583805 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
CRLF3-205ENST00000583805 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
CRLF3-205ENST00000583805 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
CRLF3-205ENST00000583805 ABT1Q9ULW3 272 aaKnown RBP11.17□□□□□ -0.62
CRLF3-205ENST00000583805 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 MAP2K1Q02750 393 aaPredicted RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
CRLF3-205ENST00000583805 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
CRLF3-205ENST00000583805 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
CRLF3-205ENST00000583805 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
CRLF3-205ENST00000583805 PDE8AO60658 829 aa11.15□□□□□ -0.62
CRLF3-205ENST00000583805 RPS12P25398 132 aaKnown RBP11.15□□□□□ -0.62
CRLF3-205ENST00000583805 RPS8P62241 208 aaKnown RBP11.15□□□□□ -0.62
CRLF3-205ENST00000583805 DPF2Q92785 391 aa11.15□□□□□ -0.62
CRLF3-205ENST00000583805 MYD88Q99836 296 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms