RNA–Protein interactions for RNA: ENST00000581767.1

DDX42-214, Transcript of DEAD-box helicase 42, humanhuman

Gene DDX42, Length 2,244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-214ENST00000581767 NEURL1BA8MQ27 555 aa10.93□□□□□ -0.66
DDX42-214ENST00000581767 ATP2B4P23634 1241 aa10.93□□□□□ -0.66
DDX42-214ENST00000581767 FLIIQ13045 1269 aa10.93□□□□□ -0.66
DDX42-214ENST00000581767 CCDC85AQ96PX6 553 aaPredicted RBP10.93□□□□□ -0.66
DDX42-214ENST00000581767 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
DDX42-214ENST00000581767 XDHP47989 1333 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 PSMD14O00487 310 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 ECE1P42892 770 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 FKBP5Q13451 457 aaPredicted RBP10.92□□□□□ -0.66
DDX42-214ENST00000581767 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 G2E3Q7L622 706 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 MICALL2Q8IY33 904 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 CWF19L2Q2TBE0 894 aaKnown RBP10.92□□□□□ -0.66
DDX42-214ENST00000581767 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
DDX42-214ENST00000581767 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 DNAAF4Q8WXU2 420 aa10.92□□□□□ -0.66
DDX42-214ENST00000581767 RTL9Q8NET4 1388 aa10.91□□□□□ -0.66
DDX42-214ENST00000581767 H7C1W4 665 aa10.91□□□□□ -0.66
DDX42-214ENST00000581767 EXOSC9Q06265 439 aaKnown RBP10.91□□□□□ -0.66
DDX42-214ENST00000581767 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
DDX42-214ENST00000581767 CDC37L1Q7L3B6 337 aa10.91□□□□□ -0.66
DDX42-214ENST00000581767 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
DDX42-214ENST00000581767 TTLL11Q8NHH1 800 aa10.91□□□□□ -0.66
DDX42-214ENST00000581767 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
DDX42-214ENST00000581767 WDR33Q9C0J8 1336 aaKnown RBP10.91□□□□□ -0.66
DDX42-214ENST00000581767 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
DDX42-214ENST00000581767 TRAF5O00463 557 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 VAMP4O75379 141 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 IGHMBP2P38935 993 aaKnown RBP10.9□□□□□ -0.66
DDX42-214ENST00000581767 UBE3BQ7Z3V4 1068 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 LINS1Q8NG48 757 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 TRPM4Q8TD43 1214 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 GPR101Q96P66 508 aaPredicted RBP10.9□□□□□ -0.66
DDX42-214ENST00000581767 COL4A1P02462 1669 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 CELF2O95319 508 aaKnown RBP10.9□□□□□ -0.66
DDX42-214ENST00000581767 CTCFP49711 727 aaPredicted RBP10.9□□□□□ -0.66
DDX42-214ENST00000581767 MAP2K1Q02750 393 aaPredicted RBP10.9□□□□□ -0.66
DDX42-214ENST00000581767 GCKRQ14397 625 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 PLA2G12BQ9BX93 195 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 BSDC1Q9NW68 430 aaPredicted RBP10.9□□□□□ -0.66
DDX42-214ENST00000581767 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
DDX42-214ENST00000581767 VIL1P09327 827 aaKnown RBP10.89□□□□□ -0.67
DDX42-214ENST00000581767 HIRAP54198 1017 aaPredicted RBP10.89□□□□□ -0.67
DDX42-214ENST00000581767 GLIS2Q9BZE0 524 aaPredicted RBP10.89□□□□□ -0.67
DDX42-214ENST00000581767 GREM2Q9H772 168 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 CACNA1FO60840 1977 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 MYH3P11055 1940 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 FMR1Q06787 632 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDX42-214ENST00000581767 CST9Q5W186 159 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 DCPSQ96C86 337 aaKnown RBP10.89□□□□□ -0.67
DDX42-214ENST00000581767 CAPNS2Q96L46 248 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
DDX42-214ENST00000581767 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 FOXN1O15353 648 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 TBC1D10BQ4KMP7 808 aaPredicted RBP10.88□□□□□ -0.67
DDX42-214ENST00000581767 SAMD7Q7Z3H4 446 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 PODNQ7Z5L7 613 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 ANKRD2Q9GZV1 360 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 ZNF408Q9H9D4 720 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 WBP1LQ9NX94 342 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 MINPP1Q9UNW1 487 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 MED23Q9ULK4 1368 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 SHTN1A0MZ66 631 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 KIF4BQ2VIQ3 1234 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
DDX42-214ENST00000581767 RSBN1LQ6PCB5 846 aaPredicted RBP10.88□□□□□ -0.67
DDX42-214ENST00000581767 USP48Q86UV5 1035 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 BEGAINQ9BUH8 593 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 KCNQ5Q9NR82 932 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 LEMD3Q9Y2U8 911 aa10.88□□□□□ -0.67
DDX42-214ENST00000581767 ZNF609O15014 1411 aa10.87□□□□□ -0.67
DDX42-214ENST00000581767 ITGA6P23229 1130 aa10.87□□□□□ -0.67
DDX42-214ENST00000581767 CCT4P50991 539 aaKnown RBP10.87□□□□□ -0.67
DDX42-214ENST00000581767 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 USP17L3A6NCW0 530 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 USP17L4A6NCW7 530 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 CSF1RP07333 972 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 CASP7P55210 303 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 GRM1Q13255 1194 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 CYP4F22Q6NT55 531 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 USP17L1Q7RTZ2 530 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 KRT26Q7Z3Y9 468 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 MAP2K2P36507 400 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 ZNF280AP59817 542 aaPredicted RBP10.86□□□□□ -0.67
DDX42-214ENST00000581767 SAPCD2Q86UD0 394 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 COA1Q9GZY4 146 aa10.86□□□□□ -0.67
DDX42-214ENST00000581767 THSD7BQ9C0I4 1608 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 KCNJ4P48050 445 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 FAM161AQ3B820 660 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 SULF1Q8IWU6 871 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 SPEF2Q9C093 1822 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 MYO3BQ8WXR4 1341 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 MMP14P50281 582 aa10.85□□□□□ -0.67
DDX42-214ENST00000581767 IFIT5Q13325 482 aaKnown RBP10.85□□□□□ -0.67
DDX42-214ENST00000581767 BEND3Q5T5X7 828 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms