RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ANKRD18BA2A2Z9 1011 aa12.96□□□□□ -0.33
CCDC47-203ENST00000580986 BBOX1O75936 387 aa12.96□□□□□ -0.33
CCDC47-203ENST00000580986 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
CCDC47-203ENST00000580986 GRAPQ13588 217 aa12.96□□□□□ -0.33
CCDC47-203ENST00000580986 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
CCDC47-203ENST00000580986 GRAPLQ8TC17 118 aaPredicted RBP12.96□□□□□ -0.33
CCDC47-203ENST00000580986 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
CCDC47-203ENST00000580986 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
CCDC47-203ENST00000580986 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
CCDC47-203ENST00000580986 ARFGEF1Q9Y6D6 1849 aa12.96□□□□□ -0.33
CCDC47-203ENST00000580986 SRGAP3O43295 1099 aa12.95□□□□□ -0.34
CCDC47-203ENST00000580986 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
CCDC47-203ENST00000580986 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 CIAO1O76071 339 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 DPEP1P16444 411 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
CCDC47-203ENST00000580986 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
CCDC47-203ENST00000580986 HDAC1Q13547 482 aaPredicted RBP12.94□□□□□ -0.34
CCDC47-203ENST00000580986 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 ANKRD18AQ8IVF6 992 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 SIRT2Q8IXJ6 389 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
CCDC47-203ENST00000580986 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
CCDC47-203ENST00000580986 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
CCDC47-203ENST00000580986 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 COL4A1P02462 1669 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 CHRNA5P30532 468 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
CCDC47-203ENST00000580986 TTLL6Q8N841 843 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 CACNA1SQ13698 1873 aa12.93□□□□□ -0.34
CCDC47-203ENST00000580986 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
CCDC47-203ENST00000580986 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
CCDC47-203ENST00000580986 TAF1P21675 1872 aa12.92□□□□□ -0.34
CCDC47-203ENST00000580986 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
CCDC47-203ENST00000580986 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
CCDC47-203ENST00000580986 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
CCDC47-203ENST00000580986 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
CCDC47-203ENST00000580986 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
CCDC47-203ENST00000580986 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
CCDC47-203ENST00000580986 ATP6V0A2Q9Y487 856 aa12.92□□□□□ -0.34
CCDC47-203ENST00000580986 A0A0G2JLW4 131 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
CCDC47-203ENST00000580986 TAF7LQ5H9L4 462 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 ZNF622Q969S3 477 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC47-203ENST00000580986 MPHOSPH8Q99549 860 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 RIPOR2Q9Y4F9 1068 aa12.91□□□□□ -0.34
CCDC47-203ENST00000580986 MROH5Q6ZUA9 1318 aa12.9□□□□□ -0.34
CCDC47-203ENST00000580986 GOLGB1Q14789 3259 aaKnown RBP12.9□□□□□ -0.34
CCDC47-203ENST00000580986 EYA2O00167 538 aa12.9□□□□□ -0.34
CCDC47-203ENST00000580986 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
CCDC47-203ENST00000580986 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
CCDC47-203ENST00000580986 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.34
CCDC47-203ENST00000580986 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
CCDC47-203ENST00000580986 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
CCDC47-203ENST00000580986 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
CCDC47-203ENST00000580986 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
CCDC47-203ENST00000580986 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
CCDC47-203ENST00000580986 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 ATG9AQ7Z3C6 839 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
CCDC47-203ENST00000580986 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 SLC39A7Q92504 469 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 ZNF594Q96JF6 807 aaPredicted RBP12.88□□□□□ -0.35
CCDC47-203ENST00000580986 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
CCDC47-203ENST00000580986 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 METRNQ9UJH8 293 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 XDHP47989 1333 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
CCDC47-203ENST00000580986 DUOX1Q9NRD9 1551 aa12.87□□□□□ -0.35
CCDC47-203ENST00000580986 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
CCDC47-203ENST00000580986 C7P10643 843 aa12.87□□□□□ -0.35
CCDC47-203ENST00000580986 G3BP1Q13283 466 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC47-203ENST00000580986 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
CCDC47-203ENST00000580986 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
CCDC47-203ENST00000580986 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
CCDC47-203ENST00000580986 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
CCDC47-203ENST00000580986 GPR108Q9NPR9 543 aa12.87□□□□□ -0.35
CCDC47-203ENST00000580986 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
CCDC47-203ENST00000580986 PDE8BO95263 885 aa12.86□□□□□ -0.35
CCDC47-203ENST00000580986 CHRNDQ07001 517 aa12.86□□□□□ -0.35
CCDC47-203ENST00000580986 LRRC24Q50LG9 513 aa12.86□□□□□ -0.35
CCDC47-203ENST00000580986 KLHDC4Q8TBB5 520 aa12.86□□□□□ -0.35
CCDC47-203ENST00000580986 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms