RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 AOX1Q06278 1338 aa16.97■□□□□ 0.31
CDK5RAP3-219ENST00000580670 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-219ENST00000580670 BMP2KLQ5H9B9 411 aa16.97■□□□□ 0.31
CDK5RAP3-219ENST00000580670 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-219ENST00000580670 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-219ENST00000580670 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
CDK5RAP3-219ENST00000580670 ZNF609O15014 1411 aa16.96■□□□□ 0.31
CDK5RAP3-219ENST00000580670 KLRG2A4D1S0 409 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-219ENST00000580670 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-219ENST00000580670 NEUROD6Q96NK8 337 aa16.96■□□□□ 0.31
CDK5RAP3-219ENST00000580670 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
CDK5RAP3-219ENST00000580670 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.3
CDK5RAP3-219ENST00000580670 TIMM10P62072 90 aa16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ILDR2Q71H61 639 aa16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-219ENST00000580670 A0A1B0GUL7 405 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 PDE8BO95263 885 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 PDE6BP35913 854 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 GRAPQ13588 217 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 HELBQ8NG08 1087 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 CHRNDQ07001 517 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ATP2B3Q16720 1220 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 PI4K2BQ8TCG2 481 aa16.94■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ERC2O15083 957 aa16.93■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
CDK5RAP3-219ENST00000580670 HOXA10P31260 410 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-219ENST00000580670 TAF5LO75529 589 aa16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 PUM3Q15397 648 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 MINPP1Q9UNW1 487 aa16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 SDSP20132 328 aa16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 C8orf34Q49A92 452 aa16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
CDK5RAP3-219ENST00000580670 SRGNP10124 158 aa16.91■□□□□ 0.3
CDK5RAP3-219ENST00000580670 NPR1P16066 1061 aa16.91■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ADORA1P30542 326 aa16.91■□□□□ 0.3
CDK5RAP3-219ENST00000580670 XAGE2Q96GT9 111 aa16.91■□□□□ 0.3
CDK5RAP3-219ENST00000580670 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
CDK5RAP3-219ENST00000580670 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-219ENST00000580670 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
CDK5RAP3-219ENST00000580670 GORABQ5T7V8 394 aa16.9■□□□□ 0.3
CDK5RAP3-219ENST00000580670 LPIN2Q92539 896 aa16.9■□□□□ 0.3
CDK5RAP3-219ENST00000580670 BACH2Q9BYV9 841 aa16.9■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-219ENST00000580670 BBOX1O75936 387 aa16.89■□□□□ 0.3
CDK5RAP3-219ENST00000580670 SLC5A1P13866 664 aa16.89■□□□□ 0.3
CDK5RAP3-219ENST00000580670 FGFR2P21802 821 aa16.89■□□□□ 0.3
CDK5RAP3-219ENST00000580670 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.3
CDK5RAP3-219ENST00000580670 ANKRD2Q9GZV1 360 aa16.89■□□□□ 0.3
CDK5RAP3-219ENST00000580670 COL11A2P13942 1736 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 SNAP23O00161 211 aa16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 MAP4K4O95819 1239 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 ATP5JP18859 108 aa16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
CDK5RAP3-219ENST00000580670 H0YIN7 160 aa16.88■□□□□ 0.29
CDK5RAP3-219ENST00000580670 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-219ENST00000580670 POLD1P28340 1107 aa16.88■□□□□ 0.29
CDK5RAP3-219ENST00000580670 CCDC158Q5M9N0 1113 aa16.88■□□□□ 0.29
CDK5RAP3-219ENST00000580670 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
CDK5RAP3-219ENST00000580670 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
CDK5RAP3-219ENST00000580670 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.291e-10■■□□□ 12.5
CDK5RAP3-219ENST00000580670 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-219ENST00000580670 CDC45O75419 566 aa16.87■□□□□ 0.29
CDK5RAP3-219ENST00000580670 ALDH1B1P30837 517 aa16.87■□□□□ 0.29
CDK5RAP3-219ENST00000580670 UBE4AQ14139 1066 aa16.87■□□□□ 0.29
CDK5RAP3-219ENST00000580670 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
CDK5RAP3-219ENST00000580670 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
CDK5RAP3-219ENST00000580670 ARAP2Q8WZ64 1704 aa16.86■□□□□ 0.29
CDK5RAP3-219ENST00000580670 KCNJ4P48050 445 aa16.86■□□□□ 0.29
CDK5RAP3-219ENST00000580670 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
CDK5RAP3-219ENST00000580670 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
CDK5RAP3-219ENST00000580670 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
CDK5RAP3-219ENST00000580670 ANKIB1Q9P2G1 1089 aa16.86■□□□□ 0.29
CDK5RAP3-219ENST00000580670 CHRNA5P30532 468 aa16.85■□□□□ 0.29
CDK5RAP3-219ENST00000580670 HAUS7Q99871 368 aa16.85■□□□□ 0.29
CDK5RAP3-219ENST00000580670 WTIPA6NIX2 430 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 CCDC102BQ68D86 513 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 XDHP47989 1333 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 AK9Q5TCS8 1911 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 PHKA1P46020 1223 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 SP8Q8IXZ3 490 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 EVI5LQ96CN4 794 aa16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 DNAJC2Q99543 621 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-219ENST00000580670 ZNF804BA4D1E1 1349 aa16.83■□□□□ 0.28
CDK5RAP3-219ENST00000580670 GPSM2P81274 684 aa16.83■□□□□ 0.28
CDK5RAP3-219ENST00000580670 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.28
CDK5RAP3-219ENST00000580670 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
CDK5RAP3-219ENST00000580670 BCAMP50895 628 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms