RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	CSF1R	P07333	972 aa		27.64	■■■□□ 2.02
ACADVL-223	ENST00000580263	LDHD	Q86WU2	507 aa		27.64	■■■□□ 2.02
ACADVL-223	ENST00000580263	EYA3	Q99504	573 aa		27.64	■■■□□ 2.02
ACADVL-223	ENST00000580263	SRCIN1	Q9C0H9	1055 aa		27.64	■■■□□ 2.02
ACADVL-223	ENST00000580263		A0A1B0GUL6	1792 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	GRM8	O00222	908 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	ALDH1L1	O75891	902 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	ITGA6	P23229	1130 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	EPS15	P42566	896 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	CIAPIN1	Q6FI81	312 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	GGA1	Q9UJY5	639 aa		27.63	■■■□□ 2.01
ACADVL-223	ENST00000580263	LMOD1	P29536	600 aa	Predicted RBP	27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	FOXO4	P98177	505 aa		27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	DOK7	Q18PE1	504 aa		27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	BSDC1	Q9NW68	430 aa	Predicted RBP	27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	PTPRC	P08575	1304 aa		27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	XDH	P47989	1333 aa		27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	PSME4	Q14997	1843 aa		27.62	■■■□□ 2.01
ACADVL-223	ENST00000580263	ALDH1L2	Q3SY69	923 aa		27.61	■■■□□ 2.01
ACADVL-223	ENST00000580263	EPHA10	Q5JZY3	1008 aa		27.61	■■■□□ 2.01
ACADVL-223	ENST00000580263	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.61	■■■□□ 2.01
ACADVL-223	ENST00000580263	MINPP1	Q9UNW1	487 aa		27.61	■■■□□ 2.01
ACADVL-223	ENST00000580263	GMPS	P49915	693 aa	Predicted RBP	27.6	■■■□□ 2.01
ACADVL-223	ENST00000580263	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.6	■■■□□ 2.01
ACADVL-223	ENST00000580263	SMC4	Q9NTJ3	1288 aa		27.6	■■■□□ 2.01
ACADVL-223	ENST00000580263	CLEC11A	Q9Y240	323 aa		27.6	■■■□□ 2.01
ACADVL-223	ENST00000580263	WTIP	A6NIX2	430 aa	Predicted RBP	27.59	■■■□□ 2.01
ACADVL-223	ENST00000580263	ECE2	O60344	883 aa		27.59	■■■□□ 2.01
ACADVL-223	ENST00000580263	IGHMBP2	P38935	993 aa	Known RBP	27.59	■■■□□ 2.01
ACADVL-223	ENST00000580263	PNMA8A	Q86V59	439 aa	Predicted RBP	27.59	■■■□□ 2.01
ACADVL-223	ENST00000580263	GPRC5D	Q9NZD1	345 aa		27.59	■■■□□ 2.01
ACADVL-223	ENST00000580263	TNIP1	Q15025	636 aa		27.58	■■■□□ 2.01
ACADVL-223	ENST00000580263	KCNQ5	Q9NR82	932 aa		27.58	■■■□□ 2.01
ACADVL-223	ENST00000580263	CHMP3	Q9Y3E7	222 aa		27.58	■■■□□ 2.01
ACADVL-223	ENST00000580263	ATP2B4	P23634	1241 aa		27.57	■■■□□ 2
ACADVL-223	ENST00000580263	LMBR1L	Q6UX01	489 aa		27.57	■■■□□ 2
ACADVL-223	ENST00000580263	ANKRD18B	A2A2Z9	1011 aa		27.56	■■■□□ 2
ACADVL-223	ENST00000580263	CT47B1	P0C2W7	299 aa	Predicted RBP	27.56	■■■□□ 2
ACADVL-223	ENST00000580263	DNAJC5G	Q8N7S2	189 aa		27.56	■■■□□ 2
ACADVL-223	ENST00000580263	PSMD14	O00487	310 aa		27.55	■■■□□ 2
ACADVL-223	ENST00000580263	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.55	■■■□□ 2
ACADVL-223	ENST00000580263	SUCLG2	Q96I99	432 aa		27.55	■■■□□ 2
ACADVL-223	ENST00000580263	MPHOSPH8	Q99549	860 aa		27.55	■■■□□ 2
ACADVL-223	ENST00000580263	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.55	■■■□□ 2
ACADVL-223	ENST00000580263	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.54	■■■□□ 2
ACADVL-223	ENST00000580263	MAP1S	Q66K74	1059 aa	Predicted RBP	27.54	■■■□□ 2
ACADVL-223	ENST00000580263	KAZALD1	Q96I82	304 aa		27.54	■■■□□ 2
ACADVL-223	ENST00000580263	UTY	O14607	1347 aa		27.53	■■■□□ 2
ACADVL-223	ENST00000580263	SHTN1	A0MZ66	631 aa		27.53	■■■□□ 2
ACADVL-223	ENST00000580263		G3V3G9	751 aa		27.53	■■■□□ 2
ACADVL-223	ENST00000580263	CCT4	P50991	539 aa	Known RBP	27.53	■■■□□ 2
ACADVL-223	ENST00000580263	IFIT5	Q13325	482 aa	Known RBP	27.53	■■■□□ 2
ACADVL-223	ENST00000580263	DCAF8	Q5TAQ9	597 aa		27.53	■■■□□ 2
ACADVL-223	ENST00000580263	ADARB2	Q9NS39	739 aa	Known RBP	27.53	■■■□□ 2
ACADVL-223	ENST00000580263	ZNF646	O15015	1829 aa	Predicted RBP	27.53	■■■□□ 2
ACADVL-223	ENST00000580263	PASK	Q96RG2	1323 aa		27.52	■■■□□ 2
ACADVL-223	ENST00000580263	ITGBL1	O95965	494 aa	Predicted RBP	27.52	■■■□□ 2
ACADVL-223	ENST00000580263	USP50	Q70EL3	339 aa	Predicted RBP	27.52	■■■□□ 2
ACADVL-223	ENST00000580263	MED23	Q9ULK4	1368 aa		27.51	■■□□□ 1.99
ACADVL-223	ENST00000580263	ZNF594	Q96JF6	807 aa	Predicted RBP	27.51	■■□□□ 1.99
ACADVL-223	ENST00000580263	RARS	P54136	660 aa	Known RBP	27.5	■■□□□ 1.99
ACADVL-223	ENST00000580263	CHRND	Q07001	517 aa		27.5	■■□□□ 1.99
ACADVL-223	ENST00000580263	CNTROB	Q8N137	903 aa		27.5	■■□□□ 1.99
ACADVL-223	ENST00000580263	CNOT7	Q9UIV1	285 aa	Known RBP	27.5	■■□□□ 1.99
ACADVL-223	ENST00000580263	NOB1	Q9ULX3	412 aa	Known RBP	27.5	■■□□□ 1.99
ACADVL-223	ENST00000580263	TRPM7	Q96QT4	1865 aa		27.49	■■□□□ 1.99
ACADVL-223	ENST00000580263	ANKRD2	Q9GZV1	360 aa		27.49	■■□□□ 1.99
ACADVL-223	ENST00000580263	LEMD3	Q9Y2U8	911 aa		27.49	■■□□□ 1.99
ACADVL-223	ENST00000580263	POLR2A	P24928	1970 aa	Known RBP	27.49	■■□□□ 1.99
ACADVL-223	ENST00000580263	KLRK1	P26718	216 aa		27.48	■■□□□ 1.99
ACADVL-223	ENST00000580263	CCDC57	Q2TAC2	916 aa		27.48	■■□□□ 1.99
ACADVL-223	ENST00000580263	TXNRD3	Q86VQ6	643 aa		27.48	■■□□□ 1.99
ACADVL-223	ENST00000580263	MICALL2	Q8IY33	904 aa		27.48	■■□□□ 1.99
ACADVL-223	ENST00000580263	TRPM4	Q8TD43	1214 aa		27.48	■■□□□ 1.99
ACADVL-223	ENST00000580263	ZNF804B	A4D1E1	1349 aa		27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	BRPF1	P55201	1214 aa	Predicted RBP	27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	HELB	Q8NG08	1087 aa	Predicted RBP	27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	DPF2	Q92785	391 aa		27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	KLRG1	Q96E93	195 aa		27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	USP44	Q9H0E7	712 aa		27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	BICC1	Q9H694	974 aa	Known RBP	27.47	■■□□□ 1.99
ACADVL-223	ENST00000580263	SNAP23	O00161	211 aa		27.46	■■□□□ 1.99
ACADVL-223	ENST00000580263	VIL1	P09327	827 aa	Known RBP	27.46	■■□□□ 1.99
ACADVL-223	ENST00000580263	HIRA	P54198	1017 aa	Predicted RBP	27.46	■■□□□ 1.99
ACADVL-223	ENST00000580263	TAF7L	Q5H9L4	462 aa		27.46	■■□□□ 1.99
ACADVL-223	ENST00000580263		H7C1D1	291 aa		27.45	■■□□□ 1.98
ACADVL-223	ENST00000580263	TAF5L	O75529	589 aa		27.45	■■□□□ 1.98
ACADVL-223	ENST00000580263	ANKRD44	Q8N8A2	993 aa		27.45	■■□□□ 1.98
ACADVL-223	ENST00000580263	RPS12	P25398	132 aa	Known RBP	27.44	■■□□□ 1.98
ACADVL-223	ENST00000580263	FMR1	Q06787	632 aa	Known RBP eCLIP	27.44	■■□□□ 1.98	1e-6	■□□□□ 9.3
ACADVL-223	ENST00000580263	RABL6	Q3YEC7	729 aa	Predicted RBP	27.44	■■□□□ 1.98
ACADVL-223	ENST00000580263	LDHAL6A	Q6ZMR3	332 aa		27.44	■■□□□ 1.98
ACADVL-223	ENST00000580263	SAMD7	Q7Z3H4	446 aa		27.44	■■□□□ 1.98
ACADVL-223	ENST00000580263	PODN	Q7Z5L7	613 aa		27.44	■■□□□ 1.98
ACADVL-223	ENST00000580263	CREBZF	Q9NS37	354 aa		27.44	■■□□□ 1.98
ACADVL-223	ENST00000580263	KCNJ4	P48050	445 aa		27.43	■■□□□ 1.98
ACADVL-223	ENST00000580263	API5	Q9BZZ5	524 aa	Known RBP	27.43	■■□□□ 1.98
ACADVL-223	ENST00000580263	EGFR	P00533	1210 aa		27.42	■■□□□ 1.98
ACADVL-223	ENST00000580263	CNNM1	Q9NRU3	951 aa		27.42	■■□□□ 1.98
ACADVL-223	ENST00000580263	ZNF609	O15014	1411 aa		27.41	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms