RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.71
PPP4R1-212ENST00000579415 C6orf229H3BNL8 230 aa10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 HCLS1P14317 486 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 PTPN12Q05209 780 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 NBPF11Q86T75 865 aa10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 AGBL3Q8NEM8 1001 aa10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 CD99L2Q8TCZ2 262 aa10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 SCAF8Q9UPN6 1271 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 DUOX1Q9NRD9 1551 aa10.64□□□□□ -0.71
PPP4R1-212ENST00000579415 MANSC4A6NHS7 340 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 MYL6BP14649 208 aa10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 NF2P35240 595 aa10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 MCM10Q7L590 875 aa10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 EYA3Q99504 573 aa10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 MYOZ2Q9NPC6 264 aa10.63□□□□□ -0.71
PPP4R1-212ENST00000579415 ZNF609O15014 1411 aa10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 LDLRAD1Q5T700 205 aa10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 RSBN1LQ6PCB5 846 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 DPF3Q92784 378 aa10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 LAMA3Q16787 3333 aa10.62□□□□□ -0.71
PPP4R1-212ENST00000579415 A0A1W2PPC1 479 aa10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 USP17L8P0C7I0 530 aa10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 GPSM2P81274 684 aa10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 CAP1Q01518 475 aa10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 SP3Q02447 781 aa10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 TAF7Q15545 349 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 GMLQ99445 158 aa10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 COL25A1Q9BXS0 654 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 ZC3H12CQ9C0D7 883 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 RBBP6Q7Z6E9 1792 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-212ENST00000579415 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
PPP4R1-212ENST00000579415 CRHR2Q13324 411 aa10.6□□□□□ -0.71
PPP4R1-212ENST00000579415 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
PPP4R1-212ENST00000579415 TBC1D16Q8TBP0 767 aa10.6□□□□□ -0.71
PPP4R1-212ENST00000579415 MIS18AQ9NYP9 233 aa10.6□□□□□ -0.71
PPP4R1-212ENST00000579415 POLR2AP24928 1970 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 WTIPA6NIX2 430 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 G3V3G9 751 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 SOX1O00570 391 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 ARHGEF6Q15052 776 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 NBPF9Q3BBW0 867 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 OTUD7BQ6GQQ9 843 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 NLRP10Q86W26 655 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 CELF1Q92879 486 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 PTCH2Q9Y6C5 1203 aa10.59□□□□□ -0.71
PPP4R1-212ENST00000579415 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.71
PPP4R1-212ENST00000579415 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 PRKG1Q13976 671 aa10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 ANKRD13DQ6ZTN6 518 aa10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 ANGEL1Q9UNK9 670 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 NR2E3Q9Y5X4 410 aa10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
PPP4R1-212ENST00000579415 WNT10BO00744 389 aa10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 PODXL2Q9NZ53 605 aa10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 STXBP5LQ9Y2K9 1186 aa10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 UNC80Q8N2C7 3258 aa10.57□□□□□ -0.72
PPP4R1-212ENST00000579415 COL3A1P02461 1466 aaPredicted RBP10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 SF3B3Q15393 1217 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 MAP3K11Q16584 847 aa10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 HSP90AB3PQ58FF7 597 aa10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 PNISRQ8TF01 805 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 WNK4Q96J92 1243 aa10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 HTATIP2Q9BUP3 242 aa10.56□□□□□ -0.72
PPP4R1-212ENST00000579415 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 ZBTB7BO15156 539 aaPredicted RBP10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 RPS8P62241 208 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 PDIA6Q15084 440 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 UBE2Q1Q7Z7E8 422 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 DEFB123Q8N688 67 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 SH3TC2Q8TF17 1288 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 SHISA4Q96DD7 197 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 PTPN18Q99952 460 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 NUP98P52948 1817 aa10.55□□□□□ -0.72
PPP4R1-212ENST00000579415 TESPA1A2RU30 521 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 UFL1O94874 794 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 PODNQ7Z5L7 613 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 NKX2-3Q8TAU0 364 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 CLMNQ96JQ2 1002 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms