RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	GGA1	Q9UJY5	639 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178		A0A1B0GUL6	1792 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	CSF1R	P07333	972 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	ITGA6	P23229	1130 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	IGHMBP2	P38935	993 aa	Known RBP	13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	CXCL9	Q07325	125 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	EAPP	Q56P03	285 aa	Predicted RBP	13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	CIAPIN1	Q6FI81	312 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	PNMA8A	Q86V59	439 aa	Predicted RBP	13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	GPR101	Q96P66	508 aa	Predicted RBP	13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	SMC4	Q9NTJ3	1288 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	BSDC1	Q9NW68	430 aa	Predicted RBP	13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	CEP350	Q5VT06	3117 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	PSME4	Q14997	1843 aa		13.85	□□□□□ -0.19
PPP4R1-208	ENST00000578178	SCN9A	Q15858	1988 aa		13.84	□□□□□ -0.19
PPP4R1-208	ENST00000578178	YDJC	A8MPS7	323 aa		13.84	□□□□□ -0.19
PPP4R1-208	ENST00000578178	RAD17	O75943	681 aa		13.84	□□□□□ -0.19
PPP4R1-208	ENST00000578178	DBNDD1	Q9H9R9	158 aa		13.84	□□□□□ -0.19
PPP4R1-208	ENST00000578178	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.84	□□□□□ -0.19
PPP4R1-208	ENST00000578178	RIMBP2	O15034	1052 aa		13.83	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ECE2	O60344	883 aa		13.83	□□□□□ -0.2
PPP4R1-208	ENST00000578178	TNIP1	Q15025	636 aa		13.83	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.83	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ANKRD18B	A2A2Z9	1011 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ATP2B4	P23634	1241 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	GMPS	P49915	693 aa	Predicted RBP	13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	FOXO4	P98177	505 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	MPHOSPH8	Q99549	860 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	GPRC5D	Q9NZD1	345 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	MINPP1	Q9UNW1	487 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	CHMP3	Q9Y3E7	222 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	MED23	Q9ULK4	1368 aa		13.82	□□□□□ -0.2
PPP4R1-208	ENST00000578178	EPS15	P42566	896 aa		13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	IFIT5	Q13325	482 aa	Known RBP	13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	DOK7	Q18PE1	504 aa		13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	EPHA10	Q5JZY3	1008 aa		13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ADARB2	Q9NS39	739 aa	Known RBP	13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	CLEC11A	Q9Y240	323 aa		13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178	UTY	O14607	1347 aa		13.81	□□□□□ -0.2
PPP4R1-208	ENST00000578178		G3V3G9	751 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	PSMD14	O00487	310 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	CCT4	P50991	539 aa	Known RBP	13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	BRPF1	P55201	1214 aa	Predicted RBP	13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	HTRA3	P83110	453 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	DCAF8	Q5TAQ9	597 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	LMBR1L	Q6UX01	489 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	USP50	Q70EL3	339 aa	Predicted RBP	13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	SUCLG2	Q96I99	432 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ANKRD2	Q9GZV1	360 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	PASK	Q96RG2	1323 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ZNF609	O15014	1411 aa		13.8	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ZNF646	O15015	1829 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-208	ENST00000578178	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-208	ENST00000578178	CCDC57	Q2TAC2	916 aa		13.79	□□□□□ -0.2
PPP4R1-208	ENST00000578178	LEMD3	Q9Y2U8	911 aa		13.79	□□□□□ -0.2
PPP4R1-208	ENST00000578178	KIF16B	Q96L93	1317 aa		13.79	□□□□□ -0.2
PPP4R1-208	ENST00000578178	RPS12	P25398	132 aa	Known RBP	13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	RARS	P54136	660 aa	Known RBP	13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	CHRND	Q07001	517 aa		13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	TAF7L	Q5H9L4	462 aa		13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	MAP1S	Q66K74	1059 aa	Predicted RBP	13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	DPF2	Q92785	391 aa		13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.78	□□□□□ -0.2
PPP4R1-208	ENST00000578178	ZNF804B	A4D1E1	1349 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	ITGBL1	O95965	494 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	MICALL2	Q8IY33	904 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	CNTROB	Q8N137	903 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	DNAJC5G	Q8N7S2	189 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	KAZALD1	Q96I82	304 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	API5	Q9BZZ5	524 aa	Known RBP	13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	BICC1	Q9H694	974 aa	Known RBP	13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	KCNQ5	Q9NR82	932 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	CREBZF	Q9NS37	354 aa		13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	CNOT7	Q9UIV1	285 aa	Known RBP	13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	NOB1	Q9ULX3	412 aa	Known RBP	13.77	□□□□□ -0.21
PPP4R1-208	ENST00000578178	TRPM7	Q96QT4	1865 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	ZBED9	Q6R2W3	1325 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	WTIP	A6NIX2	430 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178		H7C1D1	291 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	VIL1	P09327	827 aa	Known RBP	13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	KCNJ4	P48050	445 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	RABL6	Q3YEC7	729 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	PODN	Q7Z5L7	613 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	TRPM4	Q8TD43	1214 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	KLRG1	Q96E93	195 aa		13.76	□□□□□ -0.21
PPP4R1-208	ENST00000578178	SHTN1	A0MZ66	631 aa		13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	KLRK1	P26718	216 aa		13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	ANKRD44	Q8N8A2	993 aa		13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	ZNF594	Q96JF6	807 aa	Predicted RBP	13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	COA1	Q9GZY4	146 aa		13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	USP44	Q9H0E7	712 aa		13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	CNNM1	Q9NRU3	951 aa		13.75	□□□□□ -0.21
PPP4R1-208	ENST00000578178	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP4R1-208	ENST00000578178	LDHAL6A	Q6ZMR3	332 aa		13.74	□□□□□ -0.21
PPP4R1-208	ENST00000578178	TXNRD3	Q86VQ6	643 aa		13.74	□□□□□ -0.21
PPP4R1-208	ENST00000578178	ZC3H15	Q8WU90	426 aa	Known RBP	13.74	□□□□□ -0.21
PPP4R1-208	ENST00000578178	IRS2	Q9Y4H2	1338 aa		13.73	□□□□□ -0.21
PPP4R1-208	ENST00000578178	USP17L3	A6NCW0	530 aa		13.73	□□□□□ -0.21
PPP4R1-208	ENST00000578178	USP17L4	A6NCW7	530 aa		13.73	□□□□□ -0.21

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