RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 MMP16P51512 607 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 NEK4P51957 841 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 PTCRAQ6ISU1 281 aaPredicted RBP6.52□□□□□ -1.37
VAPA-203ENST00000577539 MRRFQ96E11 262 aaKnown RBP6.52□□□□□ -1.37
VAPA-203ENST00000577539 PRDM9Q9NQV7 894 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 KIAA0232Q92628 1395 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 UBTFL1P0CB47 393 aaPredicted RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 PDE1AP54750 535 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 PTPRNQ16849 979 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 SKOR2Q2VWA4 1001 aaPredicted RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 LRRCC1Q9C099 1032 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 MKRN1Q9UHC7 482 aaKnown RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 LRRFIP2Q9Y608 721 aaKnown RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 ADAMTS13Q76LX8 1427 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 OS9Q13438 667 aaPredicted RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 FOXD4L6Q3SYB3 417 aaPredicted RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 FOXD4L3Q6VB84 417 aaPredicted RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 ANP32BQ92688 251 aaKnown RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 USB1Q9BQ65 265 aaKnown RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 RIMBP2O15034 1052 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 DXOO77932 396 aaKnown RBP6.51□□□□□ -1.37
VAPA-203ENST00000577539 RECKO95980 971 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 VAMP1P23763 118 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 TSC1Q92574 1164 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 TBX22Q9Y458 520 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 PCDHGA11Q9Y5H2 935 aa6.51□□□□□ -1.37
VAPA-203ENST00000577539 SBNO1A3KN83 1393 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 RIMBP3CA6NJZ7 1639 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 RIMBP3BA6NNM3 1639 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 RIMBP3Q9UFD9 1639 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 KIF24Q5T7B8 1368 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 PNMA6EA0A0J9YXQ4 647 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 SURF6O75683 361 aaKnown RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 BAG4O95429 457 aaKnown RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 ANXA1P04083 346 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 MCCP23508 829 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 HOXC9P31274 260 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 NUCB2P80303 420 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 TAF7Q15545 349 aaPredicted RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 SCUBE3Q8IX30 993 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 ZGPATQ8N5A5 531 aaKnown RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 RRAGDQ9NQL2 400 aaPredicted RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 PLEKHG1Q9ULL1 1385 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
VAPA-203ENST00000577539 PSME1Q06323 249 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 TEFQ10587 303 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 PLPP7Q8NBV4 271 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 IL17REQ8NFR9 667 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 EVA1BQ9NVM1 165 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 OVOS2A0A0J9YW53 1432 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 TECPR2O15040 1411 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 OVOS2Q6IE36 1432 aa6.5□□□□□ -1.37
VAPA-203ENST00000577539 FSD2A1L4K1 749 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 MX1P20591 662 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 PTMSP20962 102 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 CAVIN1Q6NZI2 390 aaKnown RBP6.49□□□□□ -1.37
VAPA-203ENST00000577539 NAP1L5Q96NT1 182 aaPredicted RBP6.49□□□□□ -1.37
VAPA-203ENST00000577539 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
VAPA-203ENST00000577539 ATP10DQ9P241 1426 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
VAPA-203ENST00000577539 ARHGEF10O15013 1369 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 PRPF40AO75400 957 aaKnown RBP6.49□□□□□ -1.37
VAPA-203ENST00000577539 PKP1Q13835 747 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 ESCO1Q5FWF5 840 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 DDIT3P35638 169 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 CRB1P82279 1406 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 GAS2L3Q86XJ1 694 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 PTPRUQ92729 1446 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 UPF3BQ9BZI7 483 aaKnown RBP6.49□□□□□ -1.37
VAPA-203ENST00000577539 IGSF1Q8N6C5 1336 aa6.49□□□□□ -1.37
VAPA-203ENST00000577539 CHAMP1Q96JM3 812 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 GPSM3Q9Y4H4 160 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 RGS12O14924 1447 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 ATP8B2P98198 1209 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 ANKMY2Q8IV38 441 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 USP31Q70CQ4 1352 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 JUNDP17535 347 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 SWI5Q1ZZU3 235 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 TAF7LQ5H9L4 462 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 ZNF530Q6P9A1 599 aaPredicted RBP6.48□□□□□ -1.37
VAPA-203ENST00000577539 MPRIPQ6WCQ1 1025 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 NRXN3Q9Y4C0 1643 aa6.48□□□□□ -1.37
VAPA-203ENST00000577539 MSS51Q4VC12 460 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 PPP1R42Q7Z4L9 355 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 LRRC59Q96AG4 307 aaKnown RBP6.47□□□□□ -1.37
VAPA-203ENST00000577539 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 NCOA3Q9Y6Q9 1424 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 PI4KAP2A4QPH2 592 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 VARS2Q5ST30 1063 aaKnown RBP6.47□□□□□ -1.37
VAPA-203ENST00000577539 PI4KAP1Q8N8J0 262 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
VAPA-203ENST00000577539 MAP3K5Q99683 1374 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 KCNQ3O43525 872 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 HTATSF1O43719 755 aaKnown RBP6.47□□□□□ -1.37
VAPA-203ENST00000577539 SKIP12755 728 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 NASPP49321 788 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms