RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 ACEP12821 1306 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 IL13P35225 146 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 ERCC6LQ2NKX8 1250 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 METTL24Q5JXM2 366 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 FANCAO15360 1455 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 GRM8O00222 908 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 EBAG9O00559 213 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 CKAP4Q07065 602 aaKnown RBP15.04■□□□□ -0
PCDHGB3-201ENST00000576222 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 RBM33Q96EV2 1170 aaKnown RBP15.04■□□□□ -0
PCDHGB3-201ENST00000576222 CTAGE1Q96RT6 745 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.04■□□□□ -0
PCDHGB3-201ENST00000576222 SLC27A2O14975 620 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 CUL4AQ13619 759 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 EHBP1Q8NDI1 1231 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 KRT18P05783 430 aaKnown RBP15.03■□□□□ -0
PCDHGB3-201ENST00000576222 ZNF569Q5MCW4 686 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 BCORL1Q5H9F3 1711 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 ANKRD24Q8TF21 1146 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 SSH2Q76I76 1423 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 A0A1B0GUL7 405 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 G3V3G9 751 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 MATR3P43243 847 aaKnown RBP eCLIP15.03■□□□□ -0
PCDHGB3-201ENST00000576222 DNA2P51530 1060 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
PCDHGB3-201ENST00000576222 TM6SF1Q9BZW5 370 aa15.02■□□□□ -0
PCDHGB3-201ENST00000576222 RGS12O14924 1447 aa15.02■□□□□ -0
PCDHGB3-201ENST00000576222 FANCCQ00597 558 aa15.02■□□□□ -0
PCDHGB3-201ENST00000576222 TMEM67Q5HYA8 995 aa15.02■□□□□ -0
PCDHGB3-201ENST00000576222 OAS2P29728 719 aaKnown RBP15.02□□□□□ -0.01
PCDHGB3-201ENST00000576222 KSR2Q6VAB6 950 aa15.02□□□□□ -0.01
PCDHGB3-201ENST00000576222 CACNA2D4Q7Z3S7 1137 aa15.02□□□□□ -0.01
PCDHGB3-201ENST00000576222 TTC6Q86TZ1 520 aa15.02□□□□□ -0.01
PCDHGB3-201ENST00000576222 ABCA5Q8WWZ7 1642 aa15.02□□□□□ -0.01
PCDHGB3-201ENST00000576222 ME3Q16798 604 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 CHST3Q7LGC8 479 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 BRAPQ7Z569 592 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 PLEKHF1Q96S99 279 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 MPHOSPH8Q99549 860 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 GNL3LQ9NVN8 582 aaKnown RBP15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 LRRC8AQ8IWT6 810 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 ALS2CR12Q96Q35 445 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 AFMP43652 599 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 NAA15Q9BXJ9 866 aaKnown RBP15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 TMX4Q9H1E5 349 aaPredicted RBP15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 LRP2BPQ9P2M1 347 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 HSF2BPO75031 334 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 SPAG1Q07617 926 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 HLTFQ14527 1009 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 ZHX3Q9H4I2 956 aa15.01□□□□□ -0.01
PCDHGB3-201ENST00000576222 CLEC17AQ6ZS10 378 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 BCCIPQ9P287 314 aaKnown RBP eCLIP15□□□□□ -0.01
PCDHGB3-201ENST00000576222 NRBP1Q9UHY1 535 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 NR1I2O75469 434 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 MTIF2P46199 727 aaKnown RBP15□□□□□ -0.01
PCDHGB3-201ENST00000576222 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
PCDHGB3-201ENST00000576222 ZSCAN26Q16670 478 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 FAM227BQ96M60 508 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 MINDY4BA8MYZ0 360 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 LINS1Q8NG48 757 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 MRFAP1L1Q96HT8 127 aa15□□□□□ -0.01
PCDHGB3-201ENST00000576222 BMP2KQ9NSY1 1161 aaPredicted RBP15□□□□□ -0.01
PCDHGB3-201ENST00000576222 SSBP05455 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 TDRD12Q587J7 1177 aaKnown RBP14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 SOGA3Q5TF21 947 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 SIRT2Q8IXJ6 389 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 ZBTB43O43298 467 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 CHMP4BP1P59074 171 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 LLPHQ9BRT6 129 aaKnown RBP14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 PRC1O43663 620 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 CYLC1P35663 651 aaPredicted RBP14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 IFFO1Q0D2I5 559 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 SMC1AQ14683 1233 aaKnown RBP14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 ZFYVE27Q5T4F4 411 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 MAATS1Q7Z4T9 603 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 DISP1Q96F81 1524 aa14.99□□□□□ -0.01
PCDHGB3-201ENST00000576222 ARHGAP6O43182 974 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 OPA1O60313 960 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 XPO4Q9C0E2 1151 aaKnown RBP14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 MRVI1Q9Y6F6 885 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 NPATQ14207 1427 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 JAK2O60674 1132 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 RRAGBQ5VZM2 374 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 ELP1O95163 1332 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 SYCP1Q15431 976 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 OSBPL3Q9H4L5 887 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 ADGBQ8N7X0 1667 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 TRIM21P19474 475 aaKnown RBP14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 CWF19L2Q2TBE0 894 aaKnown RBP14.98□□□□□ -0.01
PCDHGB3-201ENST00000576222 GUCA1BQ9UMX6 200 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms