RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 BEND3Q5T5X7 828 aa20.95■□□□□ 0.94
TVP23B-206ENST00000574226 CNTROBQ8N137 903 aa20.95■□□□□ 0.94
TVP23B-206ENST00000574226 CCDC85AQ96PX6 553 aaPredicted RBP20.95■□□□□ 0.94
TVP23B-206ENST00000574226 GREM2Q9H772 168 aa20.95■□□□□ 0.94
TVP23B-206ENST00000574226 COL4A1P02462 1669 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 G3V3G9 751 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 ALDH1L1O75891 902 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 CSF1RP07333 972 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 ATP2B4P23634 1241 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 RPS12P25398 132 aaKnown RBP20.94■□□□□ 0.94
TVP23B-206ENST00000574226 IGHMBP2P38935 993 aaKnown RBP20.94■□□□□ 0.94
TVP23B-206ENST00000574226 GMPSP49915 693 aaPredicted RBP20.94■□□□□ 0.94
TVP23B-206ENST00000574226 CASP7P55210 303 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 HTRA3P83110 453 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 DCAF8Q5TAQ9 597 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 DPF2Q92785 391 aa20.94■□□□□ 0.94
TVP23B-206ENST00000574226 YDJCA8MPS7 323 aa20.93■□□□□ 0.94
TVP23B-206ENST00000574226 RIMBP2O15034 1052 aa20.93■□□□□ 0.94
TVP23B-206ENST00000574226 ECE2O60344 883 aa20.93■□□□□ 0.94
TVP23B-206ENST00000574226 SLFN5Q08AF3 891 aa20.93■□□□□ 0.94
TVP23B-206ENST00000574226 TMEM88BA6NKF7 163 aa20.92■□□□□ 0.94
TVP23B-206ENST00000574226 H7C1D1 291 aa20.92■□□□□ 0.94
TVP23B-206ENST00000574226 MAP1SQ66K74 1059 aaPredicted RBP20.92■□□□□ 0.94
TVP23B-206ENST00000574226 ZC3H15Q8WU90 426 aaKnown RBP20.92■□□□□ 0.94
TVP23B-206ENST00000574226 DBNDD1Q9H9R9 158 aa20.92■□□□□ 0.94
TVP23B-206ENST00000574226 F6X3S4 739 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 PTPRCP08575 1304 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 ITGA6P23229 1130 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 MPHOSPH8Q99549 860 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 SRCIN1Q9C0H9 1055 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 ANKRD2Q9GZV1 360 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 MINPP1Q9UNW1 487 aa20.91■□□□□ 0.94
TVP23B-206ENST00000574226 GRM8O00222 908 aa20.9■□□□□ 0.94
TVP23B-206ENST00000574226 PSMD14O00487 310 aa20.9■□□□□ 0.94
TVP23B-206ENST00000574226 CT47B1P0C2W7 299 aaPredicted RBP20.9■□□□□ 0.94
TVP23B-206ENST00000574226 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
TVP23B-206ENST00000574226 CNOT7Q9UIV1 285 aaKnown RBP20.9■□□□□ 0.94
TVP23B-206ENST00000574226 LEMD3Q9Y2U8 911 aa20.9■□□□□ 0.94
TVP23B-206ENST00000574226 ANKRD18BA2A2Z9 1011 aa20.89■□□□□ 0.93
TVP23B-206ENST00000574226 DOK7Q18PE1 504 aa20.89■□□□□ 0.93
TVP23B-206ENST00000574226 PODNQ7Z5L7 613 aa20.89■□□□□ 0.93
TVP23B-206ENST00000574226 PGAP2Q9UHJ9 254 aa20.89■□□□□ 0.93
TVP23B-206ENST00000574226 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
TVP23B-206ENST00000574226 SPEF2Q9C093 1822 aa20.88■□□□□ 0.93
TVP23B-206ENST00000574226 VIL1P09327 827 aaKnown RBP20.88■□□□□ 0.93
TVP23B-206ENST00000574226 IFIT5Q13325 482 aaKnown RBP20.88■□□□□ 0.93
TVP23B-206ENST00000574226 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
TVP23B-206ENST00000574226 ALDH1L2Q3SY69 923 aa20.88■□□□□ 0.93
TVP23B-206ENST00000574226 SLC4A10Q6U841 1118 aa20.88■□□□□ 0.93
TVP23B-206ENST00000574226 ZNF609O15014 1411 aa20.87■□□□□ 0.93
TVP23B-206ENST00000574226 CCT4P50991 539 aaKnown RBP20.87■□□□□ 0.93
TVP23B-206ENST00000574226 MICALL2Q8IY33 904 aa20.87■□□□□ 0.93
TVP23B-206ENST00000574226 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
TVP23B-206ENST00000574226 PSME4Q14997 1843 aa20.86■□□□□ 0.93
TVP23B-206ENST00000574226 FOXO4P98177 505 aa20.86■□□□□ 0.93
TVP23B-206ENST00000574226 TRMT2AQ8IZ69 625 aaKnown RBP20.86■□□□□ 0.93
TVP23B-206ENST00000574226 AGBL3Q8NEM8 1001 aa20.86■□□□□ 0.93
TVP23B-206ENST00000574226 CCDC57Q2TAC2 916 aa20.85■□□□□ 0.93
TVP23B-206ENST00000574226 GPR101Q96P66 508 aaPredicted RBP20.85■□□□□ 0.93
TVP23B-206ENST00000574226 TRPM7Q96QT4 1865 aa20.85■□□□□ 0.93
TVP23B-206ENST00000574226 SCN9AQ15858 1988 aa20.85■□□□□ 0.93
TVP23B-206ENST00000574226 CNTNAP1P78357 1384 aa20.85■□□□□ 0.93
TVP23B-206ENST00000574226 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
TVP23B-206ENST00000574226 COA1Q9GZY4 146 aa20.84■□□□□ 0.93
TVP23B-206ENST00000574226 ZBTB12Q9Y330 459 aaPredicted RBP20.84■□□□□ 0.93
TVP23B-206ENST00000574226 UTYO14607 1347 aa20.83■□□□□ 0.93
TVP23B-206ENST00000574226 MMP14P50281 582 aa20.83■□□□□ 0.93
TVP23B-206ENST00000574226 LMBR1LQ6UX01 489 aa20.83■□□□□ 0.93
TVP23B-206ENST00000574226 CDC37L1Q7L3B6 337 aa20.83■□□□□ 0.93
TVP23B-206ENST00000574226 CHMP3Q9Y3E7 222 aa20.83■□□□□ 0.93
TVP23B-206ENST00000574226 ZNF804BA4D1E1 1349 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 USP17L3A6NCW0 530 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 USP17L4A6NCW7 530 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 KCNJ4P48050 445 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 TAF7LQ5H9L4 462 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 RSBN1LQ6PCB5 846 aaPredicted RBP20.82■□□□□ 0.92
TVP23B-206ENST00000574226 USP17L1Q7RTZ2 530 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 CDCA7LQ96GN5 454 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 KCNQ5Q9NR82 932 aa20.82■□□□□ 0.92
TVP23B-206ENST00000574226 RASSF10A6NK89 507 aa20.81■□□□□ 0.92
TVP23B-206ENST00000574226 HIRAP54198 1017 aaPredicted RBP20.81■□□□□ 0.92
TVP23B-206ENST00000574226 CHRNDQ07001 517 aa20.81■□□□□ 0.92
TVP23B-206ENST00000574226 DEFB115Q30KQ5 88 aa20.81■□□□□ 0.92
TVP23B-206ENST00000574226 MKRN1Q9UHC7 482 aaKnown RBP20.81■□□□□ 0.92
TVP23B-206ENST00000574226 MYO3BQ8WXR4 1341 aa20.8■□□□□ 0.92
TVP23B-206ENST00000574226 TRPM4Q8TD43 1214 aa20.8■□□□□ 0.92
TVP23B-206ENST00000574226 SMC4Q9NTJ3 1288 aa20.8■□□□□ 0.92
TVP23B-206ENST00000574226 ABT1Q9ULW3 272 aaKnown RBP20.8■□□□□ 0.92
TVP23B-206ENST00000574226 BRPF1P55201 1214 aaPredicted RBP20.79■□□□□ 0.92
TVP23B-206ENST00000574226 ZNF280AP59817 542 aaPredicted RBP20.79■□□□□ 0.92
TVP23B-206ENST00000574226 LDHAL6AQ6ZMR3 332 aa20.79■□□□□ 0.92
TVP23B-206ENST00000574226 C15orf52Q6ZUT6 534 aaKnown RBP20.79■□□□□ 0.92
TVP23B-206ENST00000574226 USP17L8P0C7I0 530 aa20.78■□□□□ 0.92
TVP23B-206ENST00000574226 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
TVP23B-206ENST00000574226 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
TVP23B-206ENST00000574226 SAMD7Q7Z3H4 446 aa20.78■□□□□ 0.92
TVP23B-206ENST00000574226 DCPSQ96C86 337 aaKnown RBP20.78■□□□□ 0.92
TVP23B-206ENST00000574226 GMLQ99445 158 aa20.78■□□□□ 0.92
TVP23B-206ENST00000574226 NBPF7P0C2Y1 421 aaPredicted RBP20.77■□□□□ 0.92
TVP23B-206ENST00000574226 KIF4BQ2VIQ3 1234 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms