RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 BBOX1O75936 387 aa8.32□□□□□ -1.08
PRPF8-210ENST00000574217 ITGA6P23229 1130 aa8.32□□□□□ -1.08
PRPF8-210ENST00000574217 POLA2Q14181 598 aa8.32□□□□□ -1.08
PRPF8-210ENST00000574217 CCDC93Q567U6 631 aa8.32□□□□□ -1.08
PRPF8-210ENST00000574217 FOXD4L1Q9NU39 408 aa8.32□□□□□ -1.08
PRPF8-210ENST00000574217 GOLGB1Q14789 3259 aaKnown RBP8.32□□□□□ -1.08
PRPF8-210ENST00000574217 DICER1Q9UPY3 1922 aaKnown RBP8.31□□□□□ -1.08
PRPF8-210ENST00000574217 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 NFKBIEO00221 500 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 PRELPP51888 382 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
PRPF8-210ENST00000574217 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 SOGA3Q5TF21 947 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 B4GALNT3Q6L9W6 998 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 ANKRD18AQ8IVF6 992 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 SP8Q8IXZ3 490 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 CDC5LQ99459 802 aaKnown RBP8.31□□□□□ -1.08
PRPF8-210ENST00000574217 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
PRPF8-210ENST00000574217 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 LTBP1Q14766 1721 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 SURF6O75683 361 aaKnown RBP8.3□□□□□ -1.08
PRPF8-210ENST00000574217 IGHDP01880 384 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 RFX5P48382 616 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-210ENST00000574217 PTPN12Q05209 780 aaKnown RBP8.3□□□□□ -1.08
PRPF8-210ENST00000574217 HSP90AB4PQ58FF6 505 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 CC2D2BQ6DHV5 1058 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 CENPQQ7L2Z9 268 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-210ENST00000574217 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 GCC1Q96CN9 775 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 COPRSQ9NQ92 184 aa8.3□□□□□ -1.08
PRPF8-210ENST00000574217 PA2G4Q9UQ80 394 aaKnown RBP8.3□□□□□ -1.08
PRPF8-210ENST00000574217 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 IGHMBP2P38935 993 aaKnown RBP8.29□□□□□ -1.08
PRPF8-210ENST00000574217 GPSM2P81274 684 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 FKBP4Q02790 459 aaKnown RBP eCLIP8.29□□□□□ -1.08
PRPF8-210ENST00000574217 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.088e-9■■■■□ 21.4
PRPF8-210ENST00000574217 OS9Q13438 667 aaPredicted RBP8.29□□□□□ -1.08
PRPF8-210ENST00000574217 C9orf131Q5VYM1 1079 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 LDHAL6AQ6ZMR3 332 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 RTKN2Q8IZC4 609 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 ZNF594Q96JF6 807 aaPredicted RBP8.29□□□□□ -1.08
PRPF8-210ENST00000574217 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 SIL1Q9H173 461 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 TAOK3Q9H2K8 898 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 DCTPP1Q9H773 170 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 CNNM1Q9NRU3 951 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 EXOC6BQ9Y2D4 811 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 NOP58Q9Y2X3 529 aaKnown RBP8.29□□□□□ -1.08
PRPF8-210ENST00000574217 DUOX1Q9NRD9 1551 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
PRPF8-210ENST00000574217 EYA2O00167 538 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 RAB11FIP3O75154 756 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 CIAO1O76071 339 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 LMNB1P20700 586 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 IL15P40933 162 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-210ENST00000574217 DPP8Q6V1X1 898 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-210ENST00000574217 ERC1Q8IUD2 1116 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 SMC5Q8IY18 1101 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 MPNDQ8N594 471 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 PSMD1Q99460 953 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 TMX4Q9H1E5 349 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-210ENST00000574217 ZNF277Q9NRM2 450 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-210ENST00000574217 BSDC1Q9NW68 430 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-210ENST00000574217 RNF181Q9P0P0 153 aa8.28□□□□□ -1.08
PRPF8-210ENST00000574217 ZBTB47Q9UFB7 747 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-210ENST00000574217 APBB1O00213 710 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 LRRC24Q50LG9 513 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 KIF1BPQ96EK5 621 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 RTFDC1Q9BY42 306 aaPredicted RBP8.27□□□□□ -1.09
PRPF8-210ENST00000574217 PUS3Q9BZE2 481 aaKnown RBP8.27□□□□□ -1.09
PRPF8-210ENST00000574217 LRRCC1Q9C099 1032 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 MINPP1Q9UNW1 487 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 NSFL1CQ9UNZ2 370 aaKnown RBP8.27□□□□□ -1.09
PRPF8-210ENST00000574217 COL4A5P29400 1685 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 MROH5Q6ZUA9 1318 aa8.27□□□□□ -1.09
PRPF8-210ENST00000574217 UTRNP46939 3433 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 WTIPA6NIX2 430 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-210ENST00000574217 C6orf229H3BNL8 230 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 YY1P25490 414 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 IARSP41252 1262 aaKnown RBP8.26□□□□□ -1.09
PRPF8-210ENST00000574217 CHRNDQ07001 517 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 AOC3Q16853 763 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 METTL24Q5JXM2 366 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 ANKRD45Q5TZF3 282 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 SUPT20HQ8NEM7 779 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-210ENST00000574217 TBC1D16Q8TBP0 767 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 RHPN1Q8TCX5 695 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 GPR101Q96P66 508 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-210ENST00000574217 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 ANKIB1Q9P2G1 1089 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 POLLQ9UGP5 575 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 RIPOR2Q9Y4F9 1068 aa8.26□□□□□ -1.09
PRPF8-210ENST00000574217 RIMBP2O15034 1052 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms