RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 RTL9Q8NET4 1388 aa38.64■■■■□ 3.78
CTDNEP1-206ENST00000571409 CASP7P55210 303 aa38.63■■■■□ 3.77
CTDNEP1-206ENST00000571409 CNTROBQ8N137 903 aa38.63■■■■□ 3.77
CTDNEP1-206ENST00000571409 PLA2G12BQ9BX93 195 aa38.63■■■■□ 3.77
CTDNEP1-206ENST00000571409 BCL2L13Q9BXK5 485 aa38.63■■■■□ 3.77
CTDNEP1-206ENST00000571409 GGA1Q9UJY5 639 aa38.63■■■■□ 3.77
CTDNEP1-206ENST00000571409 ZC3H12CQ9C0D7 883 aaKnown RBP38.62■■■■□ 3.77
CTDNEP1-206ENST00000571409 ADARB2Q9NS39 739 aaKnown RBP38.62■■■■□ 3.77
CTDNEP1-206ENST00000571409 E9PSI1 815 aa38.61■■■■□ 3.77
CTDNEP1-206ENST00000571409 ECE2O60344 883 aa38.61■■■■□ 3.77
CTDNEP1-206ENST00000571409 DOK7Q18PE1 504 aa38.61■■■■□ 3.77
CTDNEP1-206ENST00000571409 BEND3Q5T5X7 828 aa38.61■■■■□ 3.77
CTDNEP1-206ENST00000571409 CCER2I3L3R5 266 aa38.6■■■■□ 3.77
CTDNEP1-206ENST00000571409 JMYQ8N9B5 988 aa38.6■■■■□ 3.77
CTDNEP1-206ENST00000571409 XDHP47989 1333 aa38.6■■■■□ 3.77
CTDNEP1-206ENST00000571409 BSDC1Q9NW68 430 aaPredicted RBP38.58■■■■□ 3.77
CTDNEP1-206ENST00000571409 PSMD14O00487 310 aa38.57■■■■□ 3.76
CTDNEP1-206ENST00000571409 FAM161AQ3B820 660 aa38.55■■■■□ 3.76
CTDNEP1-206ENST00000571409 KCNQ5Q9NR82 932 aa38.55■■■■□ 3.76
CTDNEP1-206ENST00000571409 MINPP1Q9UNW1 487 aa38.55■■■■□ 3.76
CTDNEP1-206ENST00000571409 ZBTB12Q9Y330 459 aaPredicted RBP38.55■■■■□ 3.76
CTDNEP1-206ENST00000571409 TMEM88BA6NKF7 163 aa38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 G3V3G9 751 aa38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 CSF1RP07333 972 aa38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 ITGA6P23229 1130 aa38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 IGHMBP2P38935 993 aaKnown RBP38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 SLFN5Q08AF3 891 aa38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 DCAF8Q5TAQ9 597 aa38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 CNOT7Q9UIV1 285 aaKnown RBP38.54■■■■□ 3.76
CTDNEP1-206ENST00000571409 ATP2B4P23634 1241 aa38.53■■■■□ 3.76
CTDNEP1-206ENST00000571409 SLC4A10Q6U841 1118 aa38.51■■■■□ 3.76
CTDNEP1-206ENST00000571409 MKRN1Q9UHC7 482 aaKnown RBP38.51■■■■□ 3.76
CTDNEP1-206ENST00000571409 SCN9AQ15858 1988 aa38.5■■■■□ 3.75
CTDNEP1-206ENST00000571409 SHTN1A0MZ66 631 aa38.5■■■■□ 3.75
CTDNEP1-206ENST00000571409 MICALL2Q8IY33 904 aa38.5■■■■□ 3.75
CTDNEP1-206ENST00000571409 DPF2Q92785 391 aa38.5■■■■□ 3.75
CTDNEP1-206ENST00000571409 MRPL50Q8N5N7 158 aaKnown RBP38.49■■■■□ 3.75
CTDNEP1-206ENST00000571409 CDCA7LQ96GN5 454 aa38.49■■■■□ 3.75
CTDNEP1-206ENST00000571409 H7C1D1 291 aa38.48■■■■□ 3.75
CTDNEP1-206ENST00000571409 GRM8O00222 908 aa38.48■■■■□ 3.75
CTDNEP1-206ENST00000571409 TRPM4Q8TD43 1214 aa38.48■■■■□ 3.75
CTDNEP1-206ENST00000571409 WTIPA6NIX2 430 aaPredicted RBP38.47■■■■□ 3.75
CTDNEP1-206ENST00000571409 ALDH1L1O75891 902 aa38.47■■■■□ 3.75
CTDNEP1-206ENST00000571409 FOXO4P98177 505 aa38.47■■■■□ 3.75
CTDNEP1-206ENST00000571409 MPHOSPH8Q99549 860 aa38.47■■■■□ 3.75
CTDNEP1-206ENST00000571409 SRCIN1Q9C0H9 1055 aa38.47■■■■□ 3.75
CTDNEP1-206ENST00000571409 RPS12P25398 132 aaKnown RBP38.46■■■■□ 3.75
CTDNEP1-206ENST00000571409 CCT4P50991 539 aaKnown RBP38.46■■■■□ 3.75
CTDNEP1-206ENST00000571409 HIRAP54198 1017 aaPredicted RBP38.46■■■■□ 3.75
CTDNEP1-206ENST00000571409 C9orf78Q9NZ63 289 aaPredicted RBP38.46■■■■□ 3.75
CTDNEP1-206ENST00000571409 CNTNAP1P78357 1384 aa38.45■■■■□ 3.75
CTDNEP1-206ENST00000571409 ANKRD18BA2A2Z9 1011 aa38.45■■■■□ 3.75
CTDNEP1-206ENST00000571409 FMR1Q06787 632 aaKnown RBP eCLIP38.45■■■■□ 3.75
CTDNEP1-206ENST00000571409 CHMP3Q9Y3E7 222 aa38.45■■■■□ 3.75
CTDNEP1-206ENST00000571409 MED23Q9ULK4 1368 aa38.44■■■■□ 3.74
CTDNEP1-206ENST00000571409 VIL1P09327 827 aaKnown RBP38.44■■■■□ 3.74
CTDNEP1-206ENST00000571409 SSH1Q8WYL5 1049 aa38.43■■■■□ 3.74
CTDNEP1-206ENST00000571409 PSME4Q14997 1843 aa38.42■■■■□ 3.74
CTDNEP1-206ENST00000571409 TRAF5O00463 557 aa38.42■■■■□ 3.74
CTDNEP1-206ENST00000571409 IFIT5Q13325 482 aaKnown RBP38.42■■■■□ 3.74
CTDNEP1-206ENST00000571409 ZC3H15Q8WU90 426 aaKnown RBP38.42■■■■□ 3.74
CTDNEP1-206ENST00000571409 PGAP2Q9UHJ9 254 aa38.42■■■■□ 3.74
CTDNEP1-206ENST00000571409 EPHA10Q5JZY3 1008 aa38.41■■■■□ 3.74
CTDNEP1-206ENST00000571409 LMBR1LQ6UX01 489 aa38.41■■■■□ 3.74
CTDNEP1-206ENST00000571409 SAMD7Q7Z3H4 446 aa38.41■■■■□ 3.74
CTDNEP1-206ENST00000571409 ANKRD2Q9GZV1 360 aa38.41■■■■□ 3.74
CTDNEP1-206ENST00000571409 LEMD3Q9Y2U8 911 aa38.41■■■■□ 3.74
CTDNEP1-206ENST00000571409 PODNQ7Z5L7 613 aa38.4■■■■□ 3.74
CTDNEP1-206ENST00000571409 TRPM7Q96QT4 1865 aa38.4■■■■□ 3.74
CTDNEP1-206ENST00000571409 PTPRCP08575 1304 aa38.39■■■■□ 3.74
CTDNEP1-206ENST00000571409 TRMT2AQ8IZ69 625 aaKnown RBP38.39■■■■□ 3.74
CTDNEP1-206ENST00000571409 TBC1D10BQ4KMP7 808 aaPredicted RBP38.38■■■■□ 3.73
CTDNEP1-206ENST00000571409 GLIS2Q9BZE0 524 aaPredicted RBP38.38■■■■□ 3.73
CTDNEP1-206ENST00000571409 ABT1Q9ULW3 272 aaKnown RBP38.38■■■■□ 3.73
CTDNEP1-206ENST00000571409 CHRNDQ07001 517 aa38.37■■■■□ 3.73
CTDNEP1-206ENST00000571409 RSBN1LQ6PCB5 846 aaPredicted RBP38.37■■■■□ 3.73
CTDNEP1-206ENST00000571409 ZNF804BA4D1E1 1349 aa38.37■■■■□ 3.73
CTDNEP1-206ENST00000571409 EGFRP00533 1210 aa38.36■■■■□ 3.73
CTDNEP1-206ENST00000571409 ALDH1L2Q3SY69 923 aa38.35■■■■□ 3.73
CTDNEP1-206ENST00000571409 RBM26Q5T8P6 1007 aaKnown RBP38.35■■■■□ 3.73
CTDNEP1-206ENST00000571409 ZNF609O15014 1411 aa38.35■■■■□ 3.73
CTDNEP1-206ENST00000571409 USP17L3A6NCW0 530 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 USP17L4A6NCW7 530 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 RASSF10A6NK89 507 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 CCDC57Q2TAC2 916 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 DEFB115Q30KQ5 88 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 USP17L1Q7RTZ2 530 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 TXNRD3Q86VQ6 643 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 AGBL3Q8NEM8 1001 aa38.34■■■■□ 3.73
CTDNEP1-206ENST00000571409 NBPF7P0C2Y1 421 aaPredicted RBP38.33■■■■□ 3.73
CTDNEP1-206ENST00000571409 HSPA1AP0DMV8 641 aaKnown RBP38.33■■■■□ 3.73
CTDNEP1-206ENST00000571409 HSPA1BP0DMV9 641 aaKnown RBP38.33■■■■□ 3.73
CTDNEP1-206ENST00000571409 VEGFBP49765 207 aa38.33■■■■□ 3.73
CTDNEP1-206ENST00000571409 CST9Q5W186 159 aa38.33■■■■□ 3.73
CTDNEP1-206ENST00000571409 SUCLG2Q96I99 432 aa38.33■■■■□ 3.73
CTDNEP1-206ENST00000571409 A0A1B0GUL6 1792 aa38.32■■■■□ 3.73
CTDNEP1-206ENST00000571409 KCNJ4P48050 445 aa38.32■■■■□ 3.72
CTDNEP1-206ENST00000571409 KIF4BQ2VIQ3 1234 aa38.32■■■■□ 3.72
CTDNEP1-206ENST00000571409 CDC37L1Q7L3B6 337 aa38.32■■■■□ 3.72
CTDNEP1-206ENST00000571409 COA1Q9GZY4 146 aa38.32■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms