RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-208	ENST00000570688	HSP90B1	P14625	803 aa	Known RBP	14	□□□□□ -0.17
ABR-208	ENST00000570688	KLRK1	P26718	216 aa		14	□□□□□ -0.17
ABR-208	ENST00000570688	ATG9A	Q7Z3C6	839 aa		14	□□□□□ -0.17
ABR-208	ENST00000570688	SIRT2	Q8IXJ6	389 aa		14	□□□□□ -0.17
ABR-208	ENST00000570688	HELB	Q8NG08	1087 aa	Predicted RBP	14	□□□□□ -0.17
ABR-208	ENST00000570688	TAOK3	Q9H2K8	898 aa		14	□□□□□ -0.17
ABR-208	ENST00000570688	ZBTB40	Q9NUA8	1239 aa		14	□□□□□ -0.17
ABR-208	ENST00000570688	RIPOR2	Q9Y4F9	1068 aa		14	□□□□□ -0.17
ABR-208	ENST00000570688	IFIT5	Q13325	482 aa	Known RBP	13.99	□□□□□ -0.17
ABR-208	ENST00000570688	CC2D2B	Q6DHV5	1058 aa		13.99	□□□□□ -0.17
ABR-208	ENST00000570688	TXNRD3	Q86VQ6	643 aa		13.99	□□□□□ -0.17
ABR-208	ENST00000570688	MPND	Q8N594	471 aa		13.99	□□□□□ -0.17
ABR-208	ENST00000570688	TBC1D16	Q8TBP0	767 aa		13.99	□□□□□ -0.17
ABR-208	ENST00000570688	CDC5L	Q99459	802 aa	Known RBP	13.99	□□□□□ -0.17
ABR-208	ENST00000570688	PODXL2	Q9NZ53	605 aa		13.99	□□□□□ -0.17
ABR-208	ENST00000570688	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.99	□□□□□ -0.17
ABR-208	ENST00000570688	TAF5L	O75529	589 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	GNAI2	P04899	355 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	CHRND	Q07001	517 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	POLA2	Q14181	598 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	TMC4	Q7Z404	712 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	RTKN2	Q8IZC4	609 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	VGLL2	Q8N8G2	317 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	RNF181	Q9P0P0	153 aa		13.98	□□□□□ -0.17
ABR-208	ENST00000570688	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.98	□□□□□ -0.17
ABR-208	ENST00000570688	LMNB1	P20700	586 aa		13.97	□□□□□ -0.17
ABR-208	ENST00000570688	IARS	P41252	1262 aa	Known RBP	13.97	□□□□□ -0.17
ABR-208	ENST00000570688	AOC3	Q16853	763 aa		13.97	□□□□□ -0.17
ABR-208	ENST00000570688	CCDC57	Q2TAC2	916 aa		13.97	□□□□□ -0.17
ABR-208	ENST00000570688	SOGA3	Q5TF21	947 aa		13.97	□□□□□ -0.17
ABR-208	ENST00000570688	CEP85	Q6P2H3	762 aa		13.97	□□□□□ -0.17
ABR-208	ENST00000570688	DPP8	Q6V1X1	898 aa	Predicted RBP	13.97	□□□□□ -0.17
ABR-208	ENST00000570688	CRBN	Q96SW2	442 aa		13.97	□□□□□ -0.17
ABR-208	ENST00000570688	ZNF541	Q9H0D2	1346 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	YDJC	A8MPS7	323 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	IGHMBP2	P38935	993 aa	Known RBP	13.96	□□□□□ -0.17
ABR-208	ENST00000570688	ATP8B2	P98198	1209 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	LDHAL6A	Q6ZMR3	332 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	SSH3	Q8TE77	659 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	COPRS	Q9NQ92	184 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	KCNQ5	Q9NR82	932 aa		13.96	□□□□□ -0.17
ABR-208	ENST00000570688	XDH	P47989	1333 aa		13.95	□□□□□ -0.18
ABR-208	ENST00000570688	SRGAP3	O43295	1099 aa		13.95	□□□□□ -0.18
ABR-208	ENST00000570688	UFL1	O94874	794 aa		13.95	□□□□□ -0.18
ABR-208	ENST00000570688	KIAA2012	Q0VF49	1180 aa		13.95	□□□□□ -0.18
ABR-208	ENST00000570688	SIL1	Q9H173	461 aa		13.95	□□□□□ -0.18
ABR-208	ENST00000570688	DDX19B	Q9UMR2	479 aa		13.95	□□□□□ -0.18
ABR-208	ENST00000570688	PSME4	Q14997	1843 aa		13.94	□□□□□ -0.18
ABR-208	ENST00000570688	FZD9	O00144	591 aa		13.94	□□□□□ -0.18
ABR-208	ENST00000570688	EYA2	O00167	538 aa		13.94	□□□□□ -0.18
ABR-208	ENST00000570688	MS4A1	P11836	297 aa		13.94	□□□□□ -0.18
ABR-208	ENST00000570688	MPHOSPH8	Q99549	860 aa		13.94	□□□□□ -0.18
ABR-208	ENST00000570688	PCDHB15	Q9Y5E8	787 aa		13.94	□□□□□ -0.18
ABR-208	ENST00000570688	DCAF8L1	A6NGE4	600 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	POTEC	B2RU33	542 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	RIMBP2	O15034	1052 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	PPIP5K2	O43314	1243 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	SASH1	O94885	1247 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	FGFR2	P21802	821 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.93	□□□□□ -0.18
ABR-208	ENST00000570688	ANKIB1	Q9P2G1	1089 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	GGA1	Q9UJY5	639 aa		13.93	□□□□□ -0.18
ABR-208	ENST00000570688	C6orf229	H3BNL8	230 aa		13.92	□□□□□ -0.18
ABR-208	ENST00000570688	YY1	P25490	414 aa		13.92	□□□□□ -0.18
ABR-208	ENST00000570688	IRX6	P78412	446 aa	Predicted RBP	13.92	□□□□□ -0.18
ABR-208	ENST00000570688	DOK7	Q18PE1	504 aa		13.92	□□□□□ -0.18
ABR-208	ENST00000570688	EXOC6	Q8TAG9	804 aa		13.92	□□□□□ -0.18
ABR-208	ENST00000570688	DBNDD1	Q9H9R9	158 aa		13.92	□□□□□ -0.18
ABR-208	ENST00000570688	CNNM1	Q9NRU3	951 aa		13.92	□□□□□ -0.18
ABR-208	ENST00000570688	ZNF804B	A4D1E1	1349 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	ARAP2	Q8WZ64	1704 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	ATP2B4	P23634	1241 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	GRIPAP1	Q4V328	841 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	TAF7L	Q5H9L4	462 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	LARGE2	Q8N3Y3	721 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	MED23	Q9ULK4	1368 aa		13.91	□□□□□ -0.18
ABR-208	ENST00000570688	CIAO1	O76071	339 aa		13.9	□□□□□ -0.18
ABR-208	ENST00000570688	DDN	O94850	711 aa	Predicted RBP	13.9	□□□□□ -0.18
ABR-208	ENST00000570688	WASHC4	Q2M389	1173 aa		13.9	□□□□□ -0.18
ABR-208	ENST00000570688	C15orf52	Q6ZUT6	534 aa	Known RBP	13.9	□□□□□ -0.18
ABR-208	ENST00000570688	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.9	□□□□□ -0.18
ABR-208	ENST00000570688	ANKRD2	Q9GZV1	360 aa		13.9	□□□□□ -0.18
ABR-208	ENST00000570688	LEMD3	Q9Y2U8	911 aa		13.9	□□□□□ -0.18
ABR-208	ENST00000570688	NOP58	Q9Y2X3	529 aa	Known RBP	13.9	□□□□□ -0.18
ABR-208	ENST00000570688	WDR90	Q96KV7	1748 aa		13.9	□□□□□ -0.18
ABR-208	ENST00000570688	PDE8B	O95263	885 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	CXCL9	Q07325	125 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	TFCP2	Q12800	502 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	METTL24	Q5JXM2	366 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	SUPT20H	Q8NEM7	779 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	VPS33B	Q9H267	617 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	MROH5	Q6ZUA9	1318 aa		13.89	□□□□□ -0.19
ABR-208	ENST00000570688	COL1A1	P02452	1464 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-208	ENST00000570688	SHTN1	A0MZ66	631 aa		13.88	□□□□□ -0.19
ABR-208	ENST00000570688	ECE2	O60344	883 aa		13.88	□□□□□ -0.19
ABR-208	ENST00000570688	ADORA1	P30542	326 aa		13.88	□□□□□ -0.19
ABR-208	ENST00000570688	ZNF526	Q8TF50	670 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-208	ENST00000570688	FAM84B	Q96KN1	310 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-208	ENST00000570688	NMRK2	Q9NPI5	230 aa		13.88	□□□□□ -0.19
ABR-208	ENST00000570688	ZNRF3	Q9ULT6	936 aa		13.88	□□□□□ -0.19

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