RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 GRIK5Q16478 980 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 JPH1Q9HDC5 661 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 PRDM6Q9NQX0 595 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 GDF11O95390 407 aa6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 AFF1P51825 1210 aaKnown RBP6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 PCSK7Q16549 785 aa6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 TTC39BQ5VTQ0 682 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 GJD3Q8N144 294 aa6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 PLVAPQ9BX97 442 aa6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 CHRDQ9H2X0 955 aa6.19□□□□□ -1.42
HMGB1P6-201ENST00000569046 LILRB5O75023 590 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 RGS9O75916 674 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 RPLP1P05386 114 aaKnown RBP6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 PCSK2P16519 638 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 EIF2AK2P19525 551 aaKnown RBP6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 ILDR2Q71H61 639 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 TMEM151AQ8N4L1 468 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 DCAF5Q96JK2 942 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 SMG9Q9H0W8 520 aaKnown RBP6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 FRRS1LQ9P0K9 344 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 FOXD3Q9UJU5 478 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 IVNS1ABPQ9Y6Y0 642 aa6.18□□□□□ -1.42
HMGB1P6-201ENST00000569046 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
HMGB1P6-201ENST00000569046 TNFRSF21O75509 655 aa6.17□□□□□ -1.42
HMGB1P6-201ENST00000569046 USP5P45974 858 aa6.17□□□□□ -1.42
HMGB1P6-201ENST00000569046 ELMSAN1Q6PJG2 1045 aa6.17□□□□□ -1.42
HMGB1P6-201ENST00000569046 PLD4Q96BZ4 506 aa6.17□□□□□ -1.42
HMGB1P6-201ENST00000569046 KRBA1A5PL33 1030 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 KIF4AO95239 1232 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 IGHA2P01877 340 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 ITGB2P05107 769 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 ACPPP15309 386 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 ATP11AP98196 1134 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 KCNA1Q09470 495 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 ADAMTSL4Q6UY14 1074 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 SALL4Q9UJQ4 1053 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 BRPF3Q9ULD4 1205 aa6.16□□□□□ -1.42
HMGB1P6-201ENST00000569046 EREGO14944 169 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 GHRHP01286 108 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 HYAL2Q12891 473 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 KCTD17Q8N5Z5 321 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 CEP120Q8N960 986 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 TTC16Q8NEE8 873 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 TTC9Q92623 222 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 FAM129BQ96TA1 746 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 RASSF4Q9H2L5 321 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 TRIM33Q9UPN9 1127 aa6.15□□□□□ -1.42
HMGB1P6-201ENST00000569046 PIK3R2O00459 728 aa6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 TRPA1O75762 1119 aa6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 CES1P23141 567 aa6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 BAG6P46379 1132 aa6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 EHHADHQ08426 723 aa6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 MSL1Q68DK7 614 aa6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 DMRTC2Q8IXT2 367 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 NOP53Q9NZM5 478 aaKnown RBP6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 BIN2Q9UBW5 565 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P6-201ENST00000569046 NFKBIEO00221 500 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 GPR182O15218 404 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 NDUFB5O43674 189 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 PHACTR2O75167 634 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 TRAPPC3LQ5T215 181 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 GDF6Q6KF10 455 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 NCAPG2Q86XI2 1143 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 SNX29Q8TEQ0 813 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 HHIPQ96QV1 700 aa6.13□□□□□ -1.43
HMGB1P6-201ENST00000569046 A0A0A0MRY4 1105 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 POLR3DP05423 398 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 ORC1Q13415 861 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 PLA2G4EQ3MJ16 856 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 CEP135Q66GS9 1140 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 AEBP1Q8IUX7 1158 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 RBSNQ9H1K0 784 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 ZFYVE28Q9HCC9 887 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 LATS2Q9NRM7 1088 aa6.12□□□□□ -1.43
HMGB1P6-201ENST00000569046 CHRNA4P43681 627 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 GRIK4Q16099 956 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 PEAR1Q5VY43 1037 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 WFDC8Q8IUA0 241 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 SPACA7Q96KW9 195 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 CITED4Q96RK1 184 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 RBCK1Q9BYM8 510 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 PBX4Q9BYU1 374 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 LACRTQ9GZZ8 138 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 DZANK1Q9NVP4 752 aa6.11□□□□□ -1.43
HMGB1P6-201ENST00000569046 C1QTNF9BB2RNN3 333 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 SPATA31C1P0DKV0 1188 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 TRIM28Q13263 835 aaKnown RBP6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 PDE3BQ13370 1112 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 TMC7Q7Z402 723 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 ALYREFQ86V81 257 aaKnown RBP6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 CD163Q86VB7 1156 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 FMR1NBQ8N0W7 255 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 IL22RA1Q8N6P7 574 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 PMEPA1Q969W9 287 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms