RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 TBC1D9BQ66K14 1250 aa21.25■□□□□ 0.99
NEIL1-221ENST00000569035 CCDC8Q9H0W5 538 aaPredicted RBP21.25■□□□□ 0.99
NEIL1-221ENST00000569035 PSMA5P28066 241 aa21.24■□□□□ 0.99
NEIL1-221ENST00000569035 CCDC171Q6TFL3 1326 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 RGL2O15211 777 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
NEIL1-221ENST00000569035 FSD1Q9BTV5 496 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 HMG20BQ9P0W2 317 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 PALD1Q9ULE6 856 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 SNX14Q9Y5W7 946 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 PARP10Q53GL7 1025 aa21.23■□□□□ 0.99
NEIL1-221ENST00000569035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.23■□□□□ 0.99
NEIL1-221ENST00000569035 ZSCAN31Q96LW9 406 aaPredicted RBP21.23■□□□□ 0.99
NEIL1-221ENST00000569035 ANKRD36CQ5JPF3 1778 aa21.22■□□□□ 0.99
NEIL1-221ENST00000569035 CDHR2Q9BYE9 1310 aa21.22■□□□□ 0.99
NEIL1-221ENST00000569035 UTP14AQ9BVJ6 771 aaKnown RBP21.22■□□□□ 0.99
NEIL1-221ENST00000569035 ANO8Q9HCE9 1232 aaPredicted RBP21.22■□□□□ 0.99
NEIL1-221ENST00000569035 TFCP2Q12800 502 aa21.21■□□□□ 0.99
NEIL1-221ENST00000569035 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
NEIL1-221ENST00000569035 SETDB2Q96T68 719 aa21.21■□□□□ 0.99
NEIL1-221ENST00000569035 FOXD4L1Q9NU39 408 aa21.21■□□□□ 0.99
NEIL1-221ENST00000569035 AKAP2Q9Y2D5 859 aa21.21■□□□□ 0.99
NEIL1-221ENST00000569035 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.21■□□□□ 0.99
NEIL1-221ENST00000569035 EYA2O00167 538 aa21.2■□□□□ 0.99
NEIL1-221ENST00000569035 GYS1P13807 737 aa21.2■□□□□ 0.99
NEIL1-221ENST00000569035 VPS53Q5VIR6 699 aa21.2■□□□□ 0.99
NEIL1-221ENST00000569035 MAP4K1Q92918 833 aa21.2■□□□□ 0.99
NEIL1-221ENST00000569035 HAUS7Q99871 368 aa21.2■□□□□ 0.99
NEIL1-221ENST00000569035 SH2B1Q9NRF2 756 aaPredicted RBP21.2■□□□□ 0.99
NEIL1-221ENST00000569035 BAG4O95429 457 aaKnown RBP21.2■□□□□ 0.98
NEIL1-221ENST00000569035 KRT32Q14532 448 aa21.2■□□□□ 0.98
NEIL1-221ENST00000569035 BOLA2Q9H3K6 86 aa21.2■□□□□ 0.98
NEIL1-221ENST00000569035 LIMCH1Q9UPQ0 1083 aa21.2■□□□□ 0.98
NEIL1-221ENST00000569035 NUP98P52948 1817 aa21.19■□□□□ 0.98
NEIL1-221ENST00000569035 IRS4O14654 1257 aaPredicted RBP21.19■□□□□ 0.98
NEIL1-221ENST00000569035 NTSR2O95665 410 aa21.19■□□□□ 0.98
NEIL1-221ENST00000569035 NECTIN1Q15223 517 aa21.19■□□□□ 0.98
NEIL1-221ENST00000569035 SLC15A2Q16348 729 aa21.19■□□□□ 0.98
NEIL1-221ENST00000569035 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
NEIL1-221ENST00000569035 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
NEIL1-221ENST00000569035 CHMP3Q9Y3E7 222 aa21.19■□□□□ 0.98
NEIL1-221ENST00000569035 KCNJ4P48050 445 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 ANKRD1Q15327 319 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 TSGA10IPQ3SY00 556 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 STK32BQ9NY57 414 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 CYP46A1Q9Y6A2 500 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 ABCC12Q96J65 1359 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 SH3TC1Q8TE82 1336 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 KLHDC4Q8TBB5 520 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 TTC14Q96N46 770 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 IL25Q9H293 177 aa21.18■□□□□ 0.98
NEIL1-221ENST00000569035 ALDH8A1Q9H2A2 487 aaPredicted RBP21.18■□□□□ 0.98
NEIL1-221ENST00000569035 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 SRCAPQ6ZRS2 3230 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 UBR3Q6ZT12 1888 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 GOLGA6L3A6NEY3 463 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 HCLS1P14317 486 aaPredicted RBP21.17■□□□□ 0.98
NEIL1-221ENST00000569035 HSP90B1P14625 803 aaKnown RBP21.17■□□□□ 0.98
NEIL1-221ENST00000569035 NMIQ13287 307 aaPredicted RBP21.17■□□□□ 0.98
NEIL1-221ENST00000569035 NFIXQ14938 502 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 KLHL40Q2TBA0 621 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 FLAD1Q8NFF5 587 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 ZSWIM6Q9HCJ5 1215 aa21.17■□□□□ 0.98
NEIL1-221ENST00000569035 CCDC85AQ96PX6 553 aaPredicted RBP21.16■□□□□ 0.98
NEIL1-221ENST00000569035 TLR7Q9NYK1 1049 aaKnown RBP21.16■□□□□ 0.98
NEIL1-221ENST00000569035 CEP126Q9P2H0 1117 aa21.16■□□□□ 0.98
NEIL1-221ENST00000569035 RGPD3A6NKT7 1758 aaPredicted RBP21.16■□□□□ 0.98
NEIL1-221ENST00000569035 RGPD4Q7Z3J3 1758 aa21.16■□□□□ 0.98
NEIL1-221ENST00000569035 ATG9AQ7Z3C6 839 aa21.15■□□□□ 0.98
NEIL1-221ENST00000569035 ZNF609O15014 1411 aa21.15■□□□□ 0.98
NEIL1-221ENST00000569035 WDR33Q9C0J8 1336 aaKnown RBP21.15■□□□□ 0.98
NEIL1-221ENST00000569035 MYH3P11055 1940 aa21.15■□□□□ 0.98
NEIL1-221ENST00000569035 CSF1RP07333 972 aa21.15■□□□□ 0.98
NEIL1-221ENST00000569035 ERFEQ4G0M1 354 aa21.15■□□□□ 0.98
NEIL1-221ENST00000569035 NBPF5PQ86XG9 351 aaPredicted RBP21.15■□□□□ 0.98
NEIL1-221ENST00000569035 KBTBD3Q8NAB2 608 aa21.15■□□□□ 0.98
NEIL1-221ENST00000569035 UPF3BQ9BZI7 483 aaKnown RBP21.15■□□□□ 0.98
NEIL1-221ENST00000569035 RBM8AQ9Y5S9 174 aaKnown RBP21.15■□□□□ 0.98
NEIL1-221ENST00000569035 BCORQ6W2J9 1755 aa21.14■□□□□ 0.98
NEIL1-221ENST00000569035 BRD1O95696 1058 aa21.14■□□□□ 0.97
NEIL1-221ENST00000569035 GTF2E1P29083 439 aaPredicted RBP21.14■□□□□ 0.97
NEIL1-221ENST00000569035 RUFY3Q7L099 469 aa21.14■□□□□ 0.97
NEIL1-221ENST00000569035 ZGPATQ8N5A5 531 aaKnown RBP21.14■□□□□ 0.97
NEIL1-221ENST00000569035 HELLSQ9NRZ9 838 aa21.14■□□□□ 0.97
NEIL1-221ENST00000569035 U3KPZ7 1027 aaPredicted RBP21.14■□□□□ 0.97
NEIL1-221ENST00000569035 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 PDE8AO60658 829 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 CASTP20810 708 aaKnown RBP21.13■□□□□ 0.97
NEIL1-221ENST00000569035 CREB3L3Q68CJ9 461 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 CCDC24Q8N4L8 307 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 PDRG1Q9NUG6 133 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 C4AP0C0L4 1744 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 TM4SF1P30408 202 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 CTSWP56202 376 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 IFIT5Q13325 482 aaKnown RBP21.13■□□□□ 0.97
NEIL1-221ENST00000569035 MCMDC2Q4G0Z9 681 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 PRPF40BQ6NWY9 871 aaKnown RBP21.13■□□□□ 0.97
NEIL1-221ENST00000569035 TPTE2Q6XPS3 522 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 TTLL11Q8NHH1 800 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms