RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 DBNDD1Q9H9R9 158 aa31.97■■■□□ 2.71
FANCA-228ENST00000567943 ANKIB1Q9P2G1 1089 aa31.97■■■□□ 2.71
FANCA-228ENST00000567943 WTIPA6NIX2 430 aaPredicted RBP31.96■■■□□ 2.71
FANCA-228ENST00000567943 ITGBL1O95965 494 aaPredicted RBP31.96■■■□□ 2.71
FANCA-228ENST00000567943 FAM161AQ3B820 660 aa31.96■■■□□ 2.71
FANCA-228ENST00000567943 SSH1Q8WYL5 1049 aa31.96■■■□□ 2.71
FANCA-228ENST00000567943 GPRC5DQ9NZD1 345 aa31.96■■■□□ 2.71
FANCA-228ENST00000567943 UFL1O94874 794 aa31.95■■■□□ 2.71
FANCA-228ENST00000567943 LMOD1P29536 600 aaPredicted RBP31.95■■■□□ 2.71
FANCA-228ENST00000567943 GMPSP49915 693 aaPredicted RBP31.95■■■□□ 2.71
FANCA-228ENST00000567943 FOXO4P98177 505 aa31.95■■■□□ 2.71
FANCA-228ENST00000567943 HNRNPUQ00839 825 aaKnown RBP eCLIP31.95■■■□□ 2.71
FANCA-228ENST00000567943 KCNQ5Q9NR82 932 aa31.95■■■□□ 2.71
FANCA-228ENST00000567943 BSDC1Q9NW68 430 aaPredicted RBP31.95■■■□□ 2.71
FANCA-228ENST00000567943 PASKQ96RG2 1323 aa31.95■■■□□ 2.7
FANCA-228ENST00000567943 DOK7Q18PE1 504 aa31.94■■■□□ 2.7
FANCA-228ENST00000567943 EYA3Q99504 573 aa31.94■■■□□ 2.7
FANCA-228ENST00000567943 GGA1Q9UJY5 639 aa31.94■■■□□ 2.7
FANCA-228ENST00000567943 MINPP1Q9UNW1 487 aa31.94■■■□□ 2.7
FANCA-228ENST00000567943 ITGA6P23229 1130 aa31.93■■■□□ 2.7
FANCA-228ENST00000567943 BCL2L13Q9BXK5 485 aa31.93■■■□□ 2.7
FANCA-228ENST00000567943 CLEC11AQ9Y240 323 aa31.93■■■□□ 2.7
FANCA-228ENST00000567943 XDHP47989 1333 aa31.93■■■□□ 2.7
FANCA-228ENST00000567943 GRM8O00222 908 aa31.92■■■□□ 2.7
FANCA-228ENST00000567943 ECE2O60344 883 aa31.92■■■□□ 2.7
FANCA-228ENST00000567943 EPHA10Q5JZY3 1008 aa31.92■■■□□ 2.7
FANCA-228ENST00000567943 SLC4A10Q6U841 1118 aa31.92■■■□□ 2.7
FANCA-228ENST00000567943 TNIP1Q15025 636 aa31.91■■■□□ 2.7
FANCA-228ENST00000567943 MAP1SQ66K74 1059 aaPredicted RBP31.91■■■□□ 2.7
FANCA-228ENST00000567943 KLRG1Q96E93 195 aa31.91■■■□□ 2.7
FANCA-228ENST00000567943 SHTN1A0MZ66 631 aa31.9■■■□□ 2.7
FANCA-228ENST00000567943 PSMD14O00487 310 aa31.9■■■□□ 2.7
FANCA-228ENST00000567943 ALDH1L1O75891 902 aa31.9■■■□□ 2.7
FANCA-228ENST00000567943 ZC3H12CQ9C0D7 883 aaKnown RBP31.9■■■□□ 2.7
FANCA-228ENST00000567943 ALDH1L2Q3SY69 923 aa31.89■■■□□ 2.7
FANCA-228ENST00000567943 SRCIN1Q9C0H9 1055 aa31.89■■■□□ 2.7
FANCA-228ENST00000567943 PSME4Q14997 1843 aa31.89■■■□□ 2.69
FANCA-228ENST00000567943 CT47B1P0C2W7 299 aaPredicted RBP31.88■■■□□ 2.69
FANCA-228ENST00000567943 USP50Q70EL3 339 aaPredicted RBP31.88■■■□□ 2.69
FANCA-228ENST00000567943 CNTROBQ8N137 903 aa31.88■■■□□ 2.69
FANCA-228ENST00000567943 SMC4Q9NTJ3 1288 aa31.88■■■□□ 2.69
FANCA-228ENST00000567943 ZBTB12Q9Y330 459 aaPredicted RBP31.88■■■□□ 2.69
FANCA-228ENST00000567943 ATP2B4P23634 1241 aa31.87■■■□□ 2.69
FANCA-228ENST00000567943 ADARB2Q9NS39 739 aaKnown RBP31.87■■■□□ 2.69
FANCA-228ENST00000567943 A0A1B0GUL6 1792 aa31.86■■■□□ 2.69
FANCA-228ENST00000567943 PTPRCP08575 1304 aa31.86■■■□□ 2.69
FANCA-228ENST00000567943 IGHMBP2P38935 993 aaKnown RBP31.86■■■□□ 2.69
FANCA-228ENST00000567943 KAZALD1Q96I82 304 aa31.85■■■□□ 2.69
FANCA-228ENST00000567943 C9orf78Q9NZ63 289 aaPredicted RBP31.85■■■□□ 2.69
FANCA-228ENST00000567943 NBPF7P0C2Y1 421 aaPredicted RBP31.84■■■□□ 2.69
FANCA-228ENST00000567943 CCT4P50991 539 aaKnown RBP31.84■■■□□ 2.69
FANCA-228ENST00000567943 HIRAP54198 1017 aaPredicted RBP31.84■■■□□ 2.69
FANCA-228ENST00000567943 LMBR1LQ6UX01 489 aa31.84■■■□□ 2.69
FANCA-228ENST00000567943 CREBZFQ9NS37 354 aa31.84■■■□□ 2.69
FANCA-228ENST00000567943 CNOT7Q9UIV1 285 aaKnown RBP31.84■■■□□ 2.69
FANCA-228ENST00000567943 UTYO14607 1347 aa31.83■■■□□ 2.69
FANCA-228ENST00000567943 ZNF646O15015 1829 aaPredicted RBP31.82■■■□□ 2.68
FANCA-228ENST00000567943 ANKRD18BA2A2Z9 1011 aa31.82■■■□□ 2.68
FANCA-228ENST00000567943 TRPM4Q8TD43 1214 aa31.82■■■□□ 2.68
FANCA-228ENST00000567943 DPF2Q92785 391 aa31.82■■■□□ 2.68
FANCA-228ENST00000567943 MED23Q9ULK4 1368 aa31.81■■■□□ 2.68
FANCA-228ENST00000567943 VIL1P09327 827 aaKnown RBP31.81■■■□□ 2.68
FANCA-228ENST00000567943 FMR1Q06787 632 aaKnown RBP eCLIP31.81■■■□□ 2.68
FANCA-228ENST00000567943 MICALL2Q8IY33 904 aa31.81■■■□□ 2.68
FANCA-228ENST00000567943 JMYQ8N9B5 988 aa31.81■■■□□ 2.68
FANCA-228ENST00000567943 SUCLG2Q96I99 432 aa31.81■■■□□ 2.68
FANCA-228ENST00000567943 MPHOSPH8Q99549 860 aa31.81■■■□□ 2.68
FANCA-228ENST00000567943 IFIT5Q13325 482 aaKnown RBP31.8■■■□□ 2.68
FANCA-228ENST00000567943 TXNRD3Q86VQ6 643 aa31.8■■■□□ 2.68
FANCA-228ENST00000567943 CHMP3Q9Y3E7 222 aa31.8■■■□□ 2.68
FANCA-228ENST00000567943 CHRNDQ07001 517 aa31.79■■■□□ 2.68
FANCA-228ENST00000567943 PGAP2Q9UHJ9 254 aa31.79■■■□□ 2.68
FANCA-228ENST00000567943 EGFRP00533 1210 aa31.78■■■□□ 2.68
FANCA-228ENST00000567943 KLRK1P26718 216 aa31.78■■■□□ 2.68
FANCA-228ENST00000567943 ZNF594Q96JF6 807 aaPredicted RBP31.78■■■□□ 2.68
FANCA-228ENST00000567943 LEMD3Q9Y2U8 911 aa31.78■■■□□ 2.68
FANCA-228ENST00000567943 G3V3G9 751 aa31.77■■■□□ 2.68
FANCA-228ENST00000567943 RPS12P25398 132 aaKnown RBP31.77■■■□□ 2.68
FANCA-228ENST00000567943 RARSP54136 660 aaKnown RBP31.77■■■□□ 2.68
FANCA-228ENST00000567943 DCAF8Q5TAQ9 597 aa31.77■■■□□ 2.68
FANCA-228ENST00000567943 SAMD7Q7Z3H4 446 aa31.77■■■□□ 2.68
FANCA-228ENST00000567943 ANKRD2Q9GZV1 360 aa31.77■■■□□ 2.68
FANCA-228ENST00000567943 ZNF804BA4D1E1 1349 aa31.76■■■□□ 2.68
FANCA-228ENST00000567943 TRPM7Q96QT4 1865 aa31.76■■■□□ 2.68
FANCA-228ENST00000567943 SNAP23O00161 211 aa31.76■■■□□ 2.67
FANCA-228ENST00000567943 ZNF609O15014 1411 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 TMEM88BA6NKF7 163 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 H7C1D1 291 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 TRAF5O00463 557 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 BRPF1P55201 1214 aaPredicted RBP31.75■■■□□ 2.67
FANCA-228ENST00000567943 PODNQ7Z5L7 613 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 USP44Q9H0E7 712 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 NOB1Q9ULX3 412 aaKnown RBP31.75■■■□□ 2.67
FANCA-228ENST00000567943 POLR2AP24928 1970 aaKnown RBP31.75■■■□□ 2.67
FANCA-228ENST00000567943 IRS2Q9Y4H2 1338 aa31.75■■■□□ 2.67
FANCA-228ENST00000567943 HELBQ8NG08 1087 aaPredicted RBP31.74■■■□□ 2.67
FANCA-228ENST00000567943 ZBED9Q6R2W3 1325 aa31.74■■■□□ 2.67
FANCA-228ENST00000567943 TAF5LO75529 589 aa31.73■■■□□ 2.67
FANCA-228ENST00000567943 CCDC57Q2TAC2 916 aa31.73■■■□□ 2.67
FANCA-228ENST00000567943 GMLQ99445 158 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms