RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 SRCAPQ6ZRS2 3230 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 HS1BP3Q53T59 392 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 MARCH10Q8NA82 808 aaPredicted RBP7.69□□□□□ -1.18
GINS3-206ENST00000567143 STAP2Q9UGK3 403 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 GLRX3O76003 335 aaKnown RBP7.69□□□□□ -1.18
GINS3-206ENST00000567143 TOM1L2Q6ZVM7 507 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 CCDC186Q7Z3E2 898 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 ZNF589Q86UQ0 364 aaPredicted RBP7.69□□□□□ -1.18
GINS3-206ENST00000567143 EAF2Q96CJ1 260 aaPredicted RBP7.69□□□□□ -1.18
GINS3-206ENST00000567143 TTC14Q96N46 770 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 DNAJC25Q9H1X3 360 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 BICC1Q9H694 974 aaKnown RBP7.69□□□□□ -1.18
GINS3-206ENST00000567143 ECHDC1Q9NTX5 307 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 ATP5J2-PTCD1G3V325 749 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 PTCD1O75127 700 aaKnown RBP7.68□□□□□ -1.18
GINS3-206ENST00000567143 ST3GAL1Q11201 340 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 G3BP1Q13283 466 aaKnown RBP eCLIP7.68□□□□□ -1.18
GINS3-206ENST00000567143 ANO6Q4KMQ2 910 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 BEND3Q5T5X7 828 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 CREB3L3Q68CJ9 461 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
GINS3-206ENST00000567143 TNMDQ9H2S6 317 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 KDM6AO15550 1401 aaPredicted RBP7.68□□□□□ -1.18
GINS3-206ENST00000567143 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 DYNC1I1O14576 645 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 EIF4A1P60842 406 aaKnown RBP7.68□□□□□ -1.18
GINS3-206ENST00000567143 CCT2P78371 535 aaKnown RBP7.68□□□□□ -1.18
GINS3-206ENST00000567143 ARID5BQ14865 1188 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 RIC3Q7Z5B4 369 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 FILIP1Q7Z7B0 1213 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 SPATA32Q96LK8 384 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 NUP62CLQ9H1M0 184 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 KCNF1Q9H3M0 494 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 GOLGB1Q14789 3259 aaKnown RBP7.68□□□□□ -1.18
GINS3-206ENST00000567143 LAMB4A4D0S4 1761 aa7.68□□□□□ -1.18
GINS3-206ENST00000567143 H3BQV1 296 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 RIOK3O14730 519 aaKnown RBP7.67□□□□□ -1.18
GINS3-206ENST00000567143 CCDC192P0DO97 292 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 U2AF2P26368 475 aaKnown RBP eCLIP7.67□□□□□ -1.18
GINS3-206ENST00000567143 DDB1Q16531 1140 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 FAM98CQ17RN3 349 aaKnown RBP7.67□□□□□ -1.18
GINS3-206ENST00000567143 IFFO2Q5TF58 517 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 DDX46Q7L014 1031 aaKnown RBP7.67□□□□□ -1.18
GINS3-206ENST00000567143 ZNF710Q8N1W2 664 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 PIBF1Q8WXW3 757 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 SUCLG2Q96I99 432 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 CAMKK2Q96RR4 588 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
GINS3-206ENST00000567143 KIF3AQ9Y496 699 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 ATP6V1DQ9Y5K8 247 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 MAP3K5Q99683 1374 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 ERVV-2B6SEH9 535 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 BLOC1S2Q6QNY1 142 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 RUFY2Q8WXA3 655 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 BABAM1Q9NWV8 329 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 EXOC5O00471 708 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 NR1I2O75469 434 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 KRT85P78386 507 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 TYRO3Q06418 890 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 MAP3K11Q16584 847 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 C1orf141Q5JVX7 400 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 ZCRB1Q8TBF4 217 aaKnown RBP7.67□□□□□ -1.18
GINS3-206ENST00000567143 GPATCH3Q96I76 525 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 NEUROD6Q96NK8 337 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 BCL2L12Q9HB09 334 aa7.67□□□□□ -1.18
GINS3-206ENST00000567143 TUBGCP6Q96RT7 1819 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 CHAF1AQ13111 956 aaPredicted RBP7.66□□□□□ -1.18
GINS3-206ENST00000567143 ATP2B3Q16720 1220 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 ISM2Q6H9L7 571 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 CCDC171Q6TFL3 1326 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 NCOA5Q9HCD5 579 aaKnown RBP7.66□□□□□ -1.18
GINS3-206ENST00000567143 SLC27A2O14975 620 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 RGL2O15211 777 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 TATP17735 454 aaPredicted RBP7.66□□□□□ -1.18
GINS3-206ENST00000567143 PTPN21Q16825 1174 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 HSP90AB3PQ58FF7 597 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 FAM184AQ8NB25 1140 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 MYRIPQ8NFW9 859 aa7.66□□□□□ -1.18
GINS3-206ENST00000567143 A0A0G2JLW4 131 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 SASH1O94885 1247 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 PHKG2P15735 406 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 MCM5P33992 734 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 OTUD7BQ6GQQ9 843 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 BRF1Q92994 677 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 MYD88Q99836 296 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 HEG1Q9ULI3 1381 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 POLA2Q14181 598 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 EPHA10Q5JZY3 1008 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 CBX8Q9HC52 389 aa7.65□□□□□ -1.18
GINS3-206ENST00000567143 CYP27B1O15528 508 aa7.65□□□□□ -1.19
GINS3-206ENST00000567143 ZNF165P49910 485 aa7.65□□□□□ -1.19
GINS3-206ENST00000567143 AKAP4Q5JQC9 854 aa7.65□□□□□ -1.19
GINS3-206ENST00000567143 UBE3BQ7Z3V4 1068 aa7.65□□□□□ -1.19
GINS3-206ENST00000567143 STRN4Q9NRL3 753 aa7.65□□□□□ -1.19
GINS3-206ENST00000567143 UBR3Q6ZT12 1888 aa7.64□□□□□ -1.19
GINS3-206ENST00000567143 KIF13BQ9NQT8 1826 aa7.64□□□□□ -1.19
GINS3-206ENST00000567143 BIN1O00499 593 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms