RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
FANCA-220ENST00000566409 SHTN1A0MZ66 631 aa18.7■□□□□ 0.58
FANCA-220ENST00000566409 DOK7Q18PE1 504 aa18.7■□□□□ 0.58
FANCA-220ENST00000566409 ANKRD18AQ8IVF6 992 aa18.7■□□□□ 0.58
FANCA-220ENST00000566409 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
FANCA-220ENST00000566409 CREBZFQ9NS37 354 aa18.7■□□□□ 0.58
FANCA-220ENST00000566409 TNIP1Q15025 636 aa18.69■□□□□ 0.58
FANCA-220ENST00000566409 USP50Q70EL3 339 aaPredicted RBP18.69■□□□□ 0.58
FANCA-220ENST00000566409 ANKIB1Q9P2G1 1089 aa18.69■□□□□ 0.58
FANCA-220ENST00000566409 ECE2O60344 883 aa18.68■□□□□ 0.58
FANCA-220ENST00000566409 UFL1O94874 794 aa18.68■□□□□ 0.58
FANCA-220ENST00000566409 CSF1RP07333 972 aa18.68■□□□□ 0.58
FANCA-220ENST00000566409 EYA3Q99504 573 aa18.68■□□□□ 0.58
FANCA-220ENST00000566409 ADARB2Q9NS39 739 aaKnown RBP18.68■□□□□ 0.58
FANCA-220ENST00000566409 ZBTB12Q9Y330 459 aaPredicted RBP18.68■□□□□ 0.58
FANCA-220ENST00000566409 PSMD14O00487 310 aa18.67■□□□□ 0.58
FANCA-220ENST00000566409 HIRAP54198 1017 aaPredicted RBP18.67■□□□□ 0.58
FANCA-220ENST00000566409 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
FANCA-220ENST00000566409 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
FANCA-220ENST00000566409 CDCA7LQ96GN5 454 aa18.67■□□□□ 0.58
FANCA-220ENST00000566409 CDC5LQ99459 802 aaKnown RBP18.67■□□□□ 0.58
FANCA-220ENST00000566409 BSDC1Q9NW68 430 aaPredicted RBP18.67■□□□□ 0.58
FANCA-220ENST00000566409 GGA1Q9UJY5 639 aa18.67■□□□□ 0.58
FANCA-220ENST00000566409 MINPP1Q9UNW1 487 aa18.67■□□□□ 0.58
FANCA-220ENST00000566409 XDHP47989 1333 aa18.67■□□□□ 0.58
FANCA-220ENST00000566409 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
FANCA-220ENST00000566409 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
FANCA-220ENST00000566409 BCL2L13Q9BXK5 485 aa18.66■□□□□ 0.58
FANCA-220ENST00000566409 ZC3H12CQ9C0D7 883 aaKnown RBP18.66■□□□□ 0.58
FANCA-220ENST00000566409 CNOT7Q9UIV1 285 aaKnown RBP18.66■□□□□ 0.58
FANCA-220ENST00000566409 PSME4Q14997 1843 aa18.65■□□□□ 0.58
FANCA-220ENST00000566409 E9PSI1 815 aa18.65■□□□□ 0.58
FANCA-220ENST00000566409 ITGA6P23229 1130 aa18.65■□□□□ 0.58
FANCA-220ENST00000566409 FOXO4P98177 505 aa18.65■□□□□ 0.58
FANCA-220ENST00000566409 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
FANCA-220ENST00000566409 TRPM4Q8TD43 1214 aa18.65■□□□□ 0.58
FANCA-220ENST00000566409 TMEM88BA6NKF7 163 aa18.64■□□□□ 0.57
FANCA-220ENST00000566409 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
FANCA-220ENST00000566409 MKRN1Q9UHC7 482 aaKnown RBP18.64■□□□□ 0.57
FANCA-220ENST00000566409 PGAP2Q9UHJ9 254 aa18.64■□□□□ 0.57
FANCA-220ENST00000566409 TRPM7Q96QT4 1865 aa18.64■□□□□ 0.57
FANCA-220ENST00000566409 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.57
FANCA-220ENST00000566409 EGFRP00533 1210 aa18.63■□□□□ 0.57
FANCA-220ENST00000566409 ATP2B4P23634 1241 aa18.63■□□□□ 0.57
FANCA-220ENST00000566409 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
FANCA-220ENST00000566409 TRMT2AQ8IZ69 625 aaKnown RBP18.63■□□□□ 0.57
FANCA-220ENST00000566409 DPF2Q92785 391 aa18.63■□□□□ 0.57
FANCA-220ENST00000566409 TRAF5O00463 557 aa18.62■□□□□ 0.57
FANCA-220ENST00000566409 VIL1P09327 827 aaKnown RBP18.62■□□□□ 0.57
FANCA-220ENST00000566409 SSH1Q8WYL5 1049 aa18.62■□□□□ 0.57
FANCA-220ENST00000566409 CNTNAP1P78357 1384 aa18.62■□□□□ 0.57
FANCA-220ENST00000566409 ZNF646O15015 1829 aaPredicted RBP18.62■□□□□ 0.57
FANCA-220ENST00000566409 A0A1B0GUL6 1792 aa18.61■□□□□ 0.57
FANCA-220ENST00000566409 GRM8O00222 908 aa18.61■□□□□ 0.57
FANCA-220ENST00000566409 IGHMBP2P38935 993 aaKnown RBP18.61■□□□□ 0.57
FANCA-220ENST00000566409 CCT4P50991 539 aaKnown RBP18.61■□□□□ 0.57
FANCA-220ENST00000566409 CST9Q5W186 159 aa18.61■□□□□ 0.57
FANCA-220ENST00000566409 SLC4A10Q6U841 1118 aa18.61■□□□□ 0.57
FANCA-220ENST00000566409 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
FANCA-220ENST00000566409 H7C1D1 291 aa18.6■□□□□ 0.57
FANCA-220ENST00000566409 ALDH1L1O75891 902 aa18.6■□□□□ 0.57
FANCA-220ENST00000566409 TXNRD3Q86VQ6 643 aa18.6■□□□□ 0.57
FANCA-220ENST00000566409 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
FANCA-220ENST00000566409 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
FANCA-220ENST00000566409 RPS12P25398 132 aaKnown RBP18.59■□□□□ 0.57
FANCA-220ENST00000566409 KLRK1P26718 216 aa18.59■□□□□ 0.57
FANCA-220ENST00000566409 LMBR1LQ6UX01 489 aa18.59■□□□□ 0.57
FANCA-220ENST00000566409 ZC3H15Q8WU90 426 aaKnown RBP18.59■□□□□ 0.57
FANCA-220ENST00000566409 GLIS2Q9BZE0 524 aaPredicted RBP18.59■□□□□ 0.57
FANCA-220ENST00000566409 SRCIN1Q9C0H9 1055 aa18.59■□□□□ 0.57
FANCA-220ENST00000566409 ANKRD18BA2A2Z9 1011 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 G3V3G9 751 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.56
FANCA-220ENST00000566409 VEGFBP49765 207 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 TBC1D10BQ4KMP7 808 aaPredicted RBP18.58■□□□□ 0.56
FANCA-220ENST00000566409 DCAF8Q5TAQ9 597 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 GMLQ99445 158 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 MPHOSPH8Q99549 860 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 C9orf78Q9NZ63 289 aaPredicted RBP18.58■□□□□ 0.56
FANCA-220ENST00000566409 LEMD3Q9Y2U8 911 aa18.58■□□□□ 0.56
FANCA-220ENST00000566409 RASSF10A6NK89 507 aa18.57■□□□□ 0.56
FANCA-220ENST00000566409 SNAP23O00161 211 aa18.57■□□□□ 0.56
FANCA-220ENST00000566409 CHRNDQ07001 517 aa18.57■□□□□ 0.56
FANCA-220ENST00000566409 DLK2Q6UY11 383 aa18.57■□□□□ 0.56
FANCA-220ENST00000566409 PODNQ7Z5L7 613 aa18.57■□□□□ 0.56
FANCA-220ENST00000566409 ZNF594Q96JF6 807 aaPredicted RBP18.57■□□□□ 0.56
FANCA-220ENST00000566409 ZNF609O15014 1411 aa18.57■□□□□ 0.56
FANCA-220ENST00000566409 ZNF804BA4D1E1 1349 aa18.56■□□□□ 0.56
FANCA-220ENST00000566409 UTYO14607 1347 aa18.56■□□□□ 0.56
FANCA-220ENST00000566409 IRS2Q9Y4H2 1338 aa18.56■□□□□ 0.56
FANCA-220ENST00000566409 IFIT5Q13325 482 aaKnown RBP18.56■□□□□ 0.56
FANCA-220ENST00000566409 RBM26Q5T8P6 1007 aaKnown RBP18.56■□□□□ 0.56
FANCA-220ENST00000566409 RSBN1LQ6PCB5 846 aaPredicted RBP18.56■□□□□ 0.56
FANCA-220ENST00000566409 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
FANCA-220ENST00000566409 ANKRD2Q9GZV1 360 aa18.56■□□□□ 0.56
FANCA-220ENST00000566409 CHMP3Q9Y3E7 222 aa18.56■□□□□ 0.56
FANCA-220ENST00000566409 PTPRCP08575 1304 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 USP17L3A6NCW0 530 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 USP17L4A6NCW7 530 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 TAF5LO75529 589 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms