RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 BCL2L13Q9BXK5 485 aa19.42■□□□□ 0.7
CMTM3-212ENST00000566121 MKRN1Q9UHC7 482 aaKnown RBP19.42■□□□□ 0.7
CMTM3-212ENST00000566121 GGA1Q9UJY5 639 aa19.42■□□□□ 0.7
CMTM3-212ENST00000566121 XDHP47989 1333 aa19.42■□□□□ 0.7
CMTM3-212ENST00000566121 CSF1RP07333 972 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 ATP2B4P23634 1241 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 VEGFBP49765 207 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 MMP14P50281 582 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 HIRAP54198 1017 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-212ENST00000566121 CASP7P55210 303 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 GCKRQ14397 625 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 DNAAF4Q8WXU2 420 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
CMTM3-212ENST00000566121 PSMD14O00487 310 aa19.4■□□□□ 0.7
CMTM3-212ENST00000566121 ECE2O60344 883 aa19.4■□□□□ 0.7
CMTM3-212ENST00000566121 CST9Q5W186 159 aa19.4■□□□□ 0.7
CMTM3-212ENST00000566121 CDC37L1Q7L3B6 337 aa19.4■□□□□ 0.7
CMTM3-212ENST00000566121 PODNQ7Z5L7 613 aa19.4■□□□□ 0.7
CMTM3-212ENST00000566121 ANKIB1Q9P2G1 1089 aa19.4■□□□□ 0.7
CMTM3-212ENST00000566121 AGBL3Q8NEM8 1001 aa19.39■□□□□ 0.69
CMTM3-212ENST00000566121 WBP1LQ9NX94 342 aa19.39■□□□□ 0.69
CMTM3-212ENST00000566121 ZNF521Q96K83 1311 aa19.39■□□□□ 0.69
CMTM3-212ENST00000566121 COL4A1P02462 1669 aa19.39■□□□□ 0.69
CMTM3-212ENST00000566121 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
CMTM3-212ENST00000566121 CWF19L2Q2TBE0 894 aaKnown RBP19.38■□□□□ 0.69
CMTM3-212ENST00000566121 COL13A1Q5TAT6 717 aaPredicted RBP19.38■□□□□ 0.69
CMTM3-212ENST00000566121 ZNF428Q96B54 188 aa19.38■□□□□ 0.69
CMTM3-212ENST00000566121 DBNDD1Q9H9R9 158 aa19.38■□□□□ 0.69
CMTM3-212ENST00000566121 PRDM10Q9NQV6 1147 aa19.38■□□□□ 0.69
CMTM3-212ENST00000566121 MINPP1Q9UNW1 487 aa19.38■□□□□ 0.69
CMTM3-212ENST00000566121 TLL2Q9Y6L7 1015 aa19.38■□□□□ 0.69
CMTM3-212ENST00000566121 RIMBP2O15034 1052 aa19.37■□□□□ 0.69
CMTM3-212ENST00000566121 UFL1O94874 794 aa19.37■□□□□ 0.69
CMTM3-212ENST00000566121 ECE1P42892 770 aa19.37■□□□□ 0.69
CMTM3-212ENST00000566121 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
CMTM3-212ENST00000566121 MICALL2Q8IY33 904 aa19.37■□□□□ 0.69
CMTM3-212ENST00000566121 LEMD3Q9Y2U8 911 aa19.37■□□□□ 0.69
CMTM3-212ENST00000566121 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
CMTM3-212ENST00000566121 ZNF280AP59817 542 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-212ENST00000566121 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-212ENST00000566121 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
CMTM3-212ENST00000566121 GMLQ99445 158 aa19.36■□□□□ 0.69
CMTM3-212ENST00000566121 GREM2Q9H772 168 aa19.36■□□□□ 0.69
CMTM3-212ENST00000566121 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-212ENST00000566121 TRPM7Q96QT4 1865 aa19.36■□□□□ 0.69
CMTM3-212ENST00000566121 MED23Q9ULK4 1368 aa19.35■□□□□ 0.69
CMTM3-212ENST00000566121 MAP2K2P36507 400 aa19.35■□□□□ 0.69
CMTM3-212ENST00000566121 UBE3BQ7Z3V4 1068 aa19.35■□□□□ 0.69
CMTM3-212ENST00000566121 JARID2Q92833 1246 aaPredicted RBP19.35■□□□□ 0.69
CMTM3-212ENST00000566121 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
CMTM3-212ENST00000566121 MYH3P11055 1940 aa19.34■□□□□ 0.69
CMTM3-212ENST00000566121 DOK7Q18PE1 504 aa19.34■□□□□ 0.69
CMTM3-212ENST00000566121 BEND3Q5T5X7 828 aa19.34■□□□□ 0.69
CMTM3-212ENST00000566121 RSBN1LQ6PCB5 846 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-212ENST00000566121 SAPCD2Q86UD0 394 aa19.34■□□□□ 0.69
CMTM3-212ENST00000566121 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
CMTM3-212ENST00000566121 KCNQ5Q9NR82 932 aa19.34■□□□□ 0.69
CMTM3-212ENST00000566121 ABT1Q9ULW3 272 aaKnown RBP19.34■□□□□ 0.69
CMTM3-212ENST00000566121 TRAF5O00463 557 aa19.33■□□□□ 0.68
CMTM3-212ENST00000566121 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.68
CMTM3-212ENST00000566121 CTCFP49711 727 aaPredicted RBP19.33■□□□□ 0.68
CMTM3-212ENST00000566121 CCT4P50991 539 aaKnown RBP19.33■□□□□ 0.68
CMTM3-212ENST00000566121 C15orf52Q6ZUT6 534 aaKnown RBP19.32■□□□□ 0.68
CMTM3-212ENST00000566121 GLIS2Q9BZE0 524 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-212ENST00000566121 COA1Q9GZY4 146 aa19.32■□□□□ 0.68
CMTM3-212ENST00000566121 USP17L3A6NCW0 530 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 USP17L4A6NCW7 530 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 G3V3G9 751 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 ALDH1L1O75891 902 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 CELF2O95319 508 aaKnown RBP19.31■□□□□ 0.68
CMTM3-212ENST00000566121 ITGA6P23229 1130 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 DCAF8Q5TAQ9 597 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 USP17L1Q7RTZ2 530 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 SAMD7Q7Z3H4 446 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 AIDAQ96BJ3 306 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-212ENST00000566121 SCN9AQ15858 1988 aa19.31■□□□□ 0.68
CMTM3-212ENST00000566121 FOXN1O15353 648 aa19.3■□□□□ 0.68
CMTM3-212ENST00000566121 FMR1Q06787 632 aaKnown RBP eCLIP19.3■□□□□ 0.68
CMTM3-212ENST00000566121 STRIP1Q5VSL9 837 aa19.3■□□□□ 0.68
CMTM3-212ENST00000566121 CAPNS2Q96L46 248 aa19.3■□□□□ 0.68
CMTM3-212ENST00000566121 PSME4Q14997 1843 aa19.3■□□□□ 0.68
CMTM3-212ENST00000566121 THSD7BQ9C0I4 1608 aa19.29■□□□□ 0.68
CMTM3-212ENST00000566121 MYO3BQ8WXR4 1341 aa19.29■□□□□ 0.68
CMTM3-212ENST00000566121 PITPNM2Q9BZ72 1349 aa19.29■□□□□ 0.68
CMTM3-212ENST00000566121 SHTN1A0MZ66 631 aa19.29■□□□□ 0.68
CMTM3-212ENST00000566121 FOXO4P98177 505 aa19.29■□□□□ 0.68
CMTM3-212ENST00000566121 DCPSQ96C86 337 aaKnown RBP19.29■□□□□ 0.68
CMTM3-212ENST00000566121 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-212ENST00000566121 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
CMTM3-212ENST00000566121 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-212ENST00000566121 USP17L8P0C7I0 530 aa19.28■□□□□ 0.68
CMTM3-212ENST00000566121 TBC1D10BQ4KMP7 808 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-212ENST00000566121 KRT26Q7Z3Y9 468 aa19.28■□□□□ 0.68
CMTM3-212ENST00000566121 USP48Q86UV5 1035 aa19.28■□□□□ 0.68
CMTM3-212ENST00000566121 TNS4Q8IZW8 715 aa19.28■□□□□ 0.68
CMTM3-212ENST00000566121 ZNF804BA4D1E1 1349 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 ANKRD18BA2A2Z9 1011 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 E9PSI1 815 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms