RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TRPM4Q8TD43 1214 aa20.01■□□□□ 0.79
USB1-208ENST00000563207 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
USB1-208ENST00000563207 BCL2L13Q9BXK5 485 aa20.01■□□□□ 0.79
USB1-208ENST00000563207 ADARB2Q9NS39 739 aaKnown RBP20.01■□□□□ 0.79
USB1-208ENST00000563207 SPEF2Q9C093 1822 aa20.01■□□□□ 0.79
USB1-208ENST00000563207 RTL9Q8NET4 1388 aa20■□□□□ 0.79
USB1-208ENST00000563207 PSMD14O00487 310 aa20■□□□□ 0.79
USB1-208ENST00000563207 PDE8AO60658 829 aa20■□□□□ 0.79
USB1-208ENST00000563207 VAMP4O75379 141 aa20■□□□□ 0.79
USB1-208ENST00000563207 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
USB1-208ENST00000563207 EGFRP00533 1210 aa20■□□□□ 0.79
USB1-208ENST00000563207 SLC4A2P04920 1241 aa20■□□□□ 0.79
USB1-208ENST00000563207 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
USB1-208ENST00000563207 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
USB1-208ENST00000563207 FOXN1O15353 648 aa19.99■□□□□ 0.79
USB1-208ENST00000563207 GLIS2Q9BZE0 524 aaPredicted RBP19.99■□□□□ 0.79
USB1-208ENST00000563207 CNOT7Q9UIV1 285 aaKnown RBP19.99■□□□□ 0.79
USB1-208ENST00000563207 RASSF10A6NK89 507 aa19.98■□□□□ 0.79
USB1-208ENST00000563207 ECE2O60344 883 aa19.98■□□□□ 0.79
USB1-208ENST00000563207 TNIP1Q15025 636 aa19.98■□□□□ 0.79
USB1-208ENST00000563207 DEFB115Q30KQ5 88 aa19.98■□□□□ 0.79
USB1-208ENST00000563207 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
USB1-208ENST00000563207 STK31Q9BXU1 1019 aa19.98■□□□□ 0.79
USB1-208ENST00000563207 ABT1Q9ULW3 272 aaKnown RBP19.98■□□□□ 0.79
USB1-208ENST00000563207 CCDC152Q4G0S7 254 aa19.97■□□□□ 0.79
USB1-208ENST00000563207 MICALL2Q8IY33 904 aa19.97■□□□□ 0.79
USB1-208ENST00000563207 NEURL1BA8MQ27 555 aa19.96■□□□□ 0.79
USB1-208ENST00000563207 UFL1O94874 794 aa19.96■□□□□ 0.79
USB1-208ENST00000563207 ANKIB1Q9P2G1 1089 aa19.96■□□□□ 0.79
USB1-208ENST00000563207 PGAP2Q9UHJ9 254 aa19.96■□□□□ 0.79
USB1-208ENST00000563207 CDHR2Q9BYE9 1310 aa19.96■□□□□ 0.79
USB1-208ENST00000563207 MYH3P11055 1940 aa19.96■□□□□ 0.79
USB1-208ENST00000563207 CAPN15O75808 1086 aa19.95■□□□□ 0.78
USB1-208ENST00000563207 CTSWP56202 376 aa19.95■□□□□ 0.78
USB1-208ENST00000563207 TNS4Q8IZW8 715 aa19.95■□□□□ 0.78
USB1-208ENST00000563207 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
USB1-208ENST00000563207 GREM2Q9H772 168 aa19.95■□□□□ 0.78
USB1-208ENST00000563207 PODXL2Q9NZ53 605 aa19.95■□□□□ 0.78
USB1-208ENST00000563207 WDR33Q9C0J8 1336 aaKnown RBP19.95■□□□□ 0.78
USB1-208ENST00000563207 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
USB1-208ENST00000563207 GRM1Q13255 1194 aa19.94■□□□□ 0.78
USB1-208ENST00000563207 TBC1D10BQ4KMP7 808 aaPredicted RBP19.94■□□□□ 0.78
USB1-208ENST00000563207 CYP4F22Q6NT55 531 aa19.94■□□□□ 0.78
USB1-208ENST00000563207 H7C1W4 665 aa19.93■□□□□ 0.78
USB1-208ENST00000563207 FLIIQ13045 1269 aa19.93■□□□□ 0.78
USB1-208ENST00000563207 RBM26Q5T8P6 1007 aaKnown RBP19.93■□□□□ 0.78
USB1-208ENST00000563207 UBE3BQ7Z3V4 1068 aa19.93■□□□□ 0.78
USB1-208ENST00000563207 EYA3Q99504 573 aa19.93■□□□□ 0.78
USB1-208ENST00000563207 GGA1Q9UJY5 639 aa19.93■□□□□ 0.78
USB1-208ENST00000563207 H7C1D1 291 aa19.92■□□□□ 0.78
USB1-208ENST00000563207 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
USB1-208ENST00000563207 ANKRD18AQ8IVF6 992 aa19.92■□□□□ 0.78
USB1-208ENST00000563207 ZC3H12CQ9C0D7 883 aaKnown RBP19.92■□□□□ 0.78
USB1-208ENST00000563207 ZNF408Q9H9D4 720 aa19.92■□□□□ 0.78
USB1-208ENST00000563207 WBP1LQ9NX94 342 aa19.92■□□□□ 0.78
USB1-208ENST00000563207 ASTN2O75129 1339 aaPredicted RBP19.92■□□□□ 0.78
USB1-208ENST00000563207 CELF2O95319 508 aaKnown RBP19.91■□□□□ 0.78
USB1-208ENST00000563207 CASP7P55210 303 aa19.91■□□□□ 0.78
USB1-208ENST00000563207 NEXNQ0ZGT2 675 aa19.91■□□□□ 0.78
USB1-208ENST00000563207 FKBP5Q13451 457 aaPredicted RBP19.91■□□□□ 0.78
USB1-208ENST00000563207 GCKRQ14397 625 aa19.91■□□□□ 0.78
USB1-208ENST00000563207 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
USB1-208ENST00000563207 DPF2Q92785 391 aa19.91■□□□□ 0.78
USB1-208ENST00000563207 CAPNS2Q96L46 248 aa19.91■□□□□ 0.78
USB1-208ENST00000563207 TLL2Q9Y6L7 1015 aa19.91■□□□□ 0.78
USB1-208ENST00000563207 F6X3S4 739 aa19.9■□□□□ 0.78
USB1-208ENST00000563207 AOC2O75106 756 aa19.9■□□□□ 0.78
USB1-208ENST00000563207 HSP90B1P14625 803 aaKnown RBP19.9■□□□□ 0.78
USB1-208ENST00000563207 ALDH1L2Q3SY69 923 aa19.9■□□□□ 0.78
USB1-208ENST00000563207 MINPP1Q9UNW1 487 aa19.9■□□□□ 0.78
USB1-208ENST00000563207 VIL1P09327 827 aaKnown RBP19.89■□□□□ 0.77
USB1-208ENST00000563207 PSME4Q14997 1843 aa19.89■□□□□ 0.77
USB1-208ENST00000563207 DNAAF4Q8WXU2 420 aa19.89■□□□□ 0.77
USB1-208ENST00000563207 ZNF646O15015 1829 aaPredicted RBP19.88■□□□□ 0.77
USB1-208ENST00000563207 XDHP47989 1333 aa19.88■□□□□ 0.77
USB1-208ENST00000563207 LBX1P52954 281 aa19.88■□□□□ 0.77
USB1-208ENST00000563207 SAPCD2Q86UD0 394 aa19.88■□□□□ 0.77
USB1-208ENST00000563207 TXNRD3Q86VQ6 643 aa19.88■□□□□ 0.77
USB1-208ENST00000563207 ZC3H15Q8WU90 426 aaKnown RBP19.88■□□□□ 0.77
USB1-208ENST00000563207 MXD3Q9BW11 206 aa19.88■□□□□ 0.77
USB1-208ENST00000563207 THSD7BQ9C0I4 1608 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 ADM5C9JUS6 153 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 G3V3G9 751 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 KLRK1P26718 216 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 DCAF8Q5TAQ9 597 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 CDC37L1Q7L3B6 337 aa19.87■□□□□ 0.77
USB1-208ENST00000563207 CDC5LQ99459 802 aaKnown RBP19.87■□□□□ 0.77
USB1-208ENST00000563207 ATP2B4P23634 1241 aa19.86■□□□□ 0.77
USB1-208ENST00000563207 BSDC1Q9NW68 430 aaPredicted RBP19.86■□□□□ 0.77
USB1-208ENST00000563207 SCAF8Q9UPN6 1271 aaKnown RBP19.86■□□□□ 0.77
USB1-208ENST00000563207 SNAP23O00161 211 aa19.85■□□□□ 0.77
USB1-208ENST00000563207 HSPA8P11142 646 aaKnown RBP19.85■□□□□ 0.77
USB1-208ENST00000563207 ITGA6P23229 1130 aa19.85■□□□□ 0.77
USB1-208ENST00000563207 RPS12P25398 132 aaKnown RBP19.85■□□□□ 0.77
USB1-208ENST00000563207 KIF4BQ2VIQ3 1234 aa19.85■□□□□ 0.77
USB1-208ENST00000563207 LINS1Q8NG48 757 aa19.85■□□□□ 0.77
USB1-208ENST00000563207 AIDAQ96BJ3 306 aa19.85■□□□□ 0.77
USB1-208ENST00000563207 ZIC5Q96T25 663 aa19.85■□□□□ 0.77
USB1-208ENST00000563207 GMLQ99445 158 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms