RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 NFIAQ12857 509 aa7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 PTK7Q13308 1070 aa7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 FAM117BQ6P1L5 589 aa7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 UTP4Q969X6 686 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 SPACA7Q96KW9 195 aa7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-202ENST00000562702 FAM196BA6NMK8 535 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 MMP20O60882 483 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 LGR5O75473 907 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 MED26O95402 600 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 WNT11O96014 354 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 CD68P34810 354 aaPredicted RBP7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 ACAD11Q709F0 780 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 ZDHHC13Q8IUH4 622 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 UBL7Q96S82 380 aaPredicted RBP7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 DBNDD2Q9BQY9 259 aa7.03□□□□□ -1.28
HDGFL3-202ENST00000562702 OPLAHO14841 1288 aa7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 SMNDC1O75940 238 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 FZD5Q13467 585 aa7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 CRTC2Q53ET0 693 aaPredicted RBP7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 RNF43Q68DV7 783 aa7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 TREML1Q86YW5 311 aa7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 TRIM33Q9UPN9 1127 aa7.02□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L15C9J2P7 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L10C9JJH3 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L13C9JLJ4 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L12C9JPN9 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L11C9JVI0 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L21D6R901 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L18D6R9N7 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L22D6RA61 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L17D6RBQ6 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L19D6RCP7 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L20D6RJB6 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 SART1O43290 800 aaKnown RBP7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP17L24Q0WX57 530 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 NLRP13Q86W25 1043 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 GLMNQ92990 594 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 C7orf69Q9H7B7 122 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 VRTNQ9H8Y1 702 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 FAM13BQ9NYF5 915 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 USP20Q9Y2K6 914 aa7.01□□□□□ -1.29
HDGFL3-202ENST00000562702 LINC01387J3KSC0 135 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 SPINK2P20155 84 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 WEE1P30291 646 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 DUOXA2Q1HG44 320 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 DTX1Q86Y01 620 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 TRIM42Q8IWZ5 723 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 KLHL23Q8NBE8 558 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 GIMAP7Q8NHV1 300 aa7□□□□□ -1.29
HDGFL3-202ENST00000562702 CDC27P30260 824 aa6.99□□□□□ -1.29
HDGFL3-202ENST00000562702 HYAL2Q12891 473 aa6.99□□□□□ -1.29
HDGFL3-202ENST00000562702 CLEC10AQ8IUN9 316 aa6.99□□□□□ -1.29
HDGFL3-202ENST00000562702 ARMC10Q8N2F6 343 aa6.99□□□□□ -1.29
HDGFL3-202ENST00000562702 MYRFLQ96LU7 910 aa6.99□□□□□ -1.29
HDGFL3-202ENST00000562702 CEP135Q66GS9 1140 aa6.98□□□□□ -1.29
HDGFL3-202ENST00000562702 GALNT11Q8NCW6 608 aa6.98□□□□□ -1.29
HDGFL3-202ENST00000562702 FAM46AQ96IP4 442 aaKnown RBP6.98□□□□□ -1.29
HDGFL3-202ENST00000562702 LACRTQ9GZZ8 138 aa6.98□□□□□ -1.29
HDGFL3-202ENST00000562702 KCNF1Q9H3M0 494 aa6.98□□□□□ -1.29
HDGFL3-202ENST00000562702 KCNMB2Q9Y691 235 aa6.98□□□□□ -1.29
HDGFL3-202ENST00000562702 HMX2A2RU54 273 aa6.97□□□□□ -1.29
HDGFL3-202ENST00000562702 PIK3R5Q8WYR1 880 aa6.97□□□□□ -1.29
HDGFL3-202ENST00000562702 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
HDGFL3-202ENST00000562702 FSCN2O14926 492 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 SCNN1AP37088 669 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 KANK4Q5T7N3 995 aaPredicted RBP6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 TTC39BQ5VTQ0 682 aaPredicted RBP6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 OR13H1Q8NG92 308 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 FAM200AQ8TCP9 573 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 CALR3Q96L12 384 aaKnown RBP6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 FAM83CQ9BQN1 747 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 PPP1R12CQ9BZL4 782 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 LRFN2Q9ULH4 789 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 ANGEL1Q9UNK9 670 aaKnown RBP6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 HIF3AQ9Y2N7 669 aa6.96□□□□□ -1.3
HDGFL3-202ENST00000562702 UBAP1LF5GYI3 381 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 WISP1O95388 367 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 CABP4P57796 275 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 TXNDC11Q6PKC3 985 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 BEND4Q6ZU67 534 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 FAM20CQ8IXL6 584 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 SHKBP1Q8TBC3 707 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 SEC31BQ9NQW1 1179 aa6.95□□□□□ -1.3
HDGFL3-202ENST00000562702 PRR19A6NJB7 356 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 BMP3P12645 472 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 PTPRAP18433 802 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 CDC25BP30305 580 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 KIAA1211Q6ZU35 1233 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 CARD10Q9BWT7 1032 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 ATG3Q9NT62 314 aa6.94□□□□□ -1.3
HDGFL3-202ENST00000562702 GAS2O43903 313 aaKnown RBP6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 COX20Q5RI15 118 aa6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 FDX2Q6P4F2 183 aa6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 PROSER2Q86WR7 435 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms