RNA–Protein interactions for RNA: ENST00000562428.6

NAE1-207, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-207ENST00000562428 USP17L22D6RA61 530 aa9.85□□□□□ -0.83
NAE1-207ENST00000562428 USP17L17D6RBQ6 530 aa9.85□□□□□ -0.83
NAE1-207ENST00000562428 USP17L19D6RCP7 530 aa9.85□□□□□ -0.83
NAE1-207ENST00000562428 USP17L20D6RJB6 530 aa9.85□□□□□ -0.83
NAE1-207ENST00000562428 WISP1O95388 367 aa9.85□□□□□ -0.83
NAE1-207ENST00000562428 USP17L24Q0WX57 530 aa9.85□□□□□ -0.83
NAE1-207ENST00000562428 TLR7Q9NYK1 1049 aaKnown RBP9.85□□□□□ -0.83
NAE1-207ENST00000562428 LGR5O75473 907 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 NFIAQ12857 509 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 DPYDQ12882 1025 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 ANKMY2Q8IV38 441 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 GALNT11Q8NCW6 608 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 C11orf16Q9NQ32 467 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 USP20Q9Y2K6 914 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
NAE1-207ENST00000562428 ARSDP51689 593 aa9.83□□□□□ -0.84
NAE1-207ENST00000562428 HINFPQ9BQA5 517 aa9.83□□□□□ -0.84
NAE1-207ENST00000562428 C7orf69Q9H7B7 122 aa9.83□□□□□ -0.84
NAE1-207ENST00000562428 LOC102724428A0A0B4J2F2 783 aa9.82□□□□□ -0.84
NAE1-207ENST00000562428 TM4SF5O14894 197 aa9.82□□□□□ -0.84
NAE1-207ENST00000562428 SIK1P57059 783 aa9.82□□□□□ -0.84
NAE1-207ENST00000562428 INTS5Q6P9B9 1019 aaKnown RBP9.82□□□□□ -0.84
NAE1-207ENST00000562428 TRIM42Q8IWZ5 723 aa9.82□□□□□ -0.84
NAE1-207ENST00000562428 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
NAE1-207ENST00000562428 TRIM33Q9UPN9 1127 aa9.82□□□□□ -0.84
NAE1-207ENST00000562428 OPLAHO14841 1288 aa9.81□□□□□ -0.84
NAE1-207ENST00000562428 DHX15O43143 795 aaKnown RBP9.81□□□□□ -0.84
NAE1-207ENST00000562428 HMX2A2RU54 273 aa9.8□□□□□ -0.84
NAE1-207ENST00000562428 MICAL2O94851 1124 aa9.8□□□□□ -0.84
NAE1-207ENST00000562428 KCNK4Q9NYG8 393 aa9.8□□□□□ -0.84
NAE1-207ENST00000562428 WNT11O96014 354 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 EGFRP00533 1210 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 DGKZQ13574 1117 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 LCE4AQ5TA78 99 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 RNF43Q68DV7 783 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 MAP4K3Q8IVH8 894 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 FAM46AQ96IP4 442 aaKnown RBP9.79□□□□□ -0.84
NAE1-207ENST00000562428 NSUN5Q96P11 429 aaKnown RBP9.79□□□□□ -0.84
NAE1-207ENST00000562428 ARXQ96QS3 562 aa9.79□□□□□ -0.84
NAE1-207ENST00000562428 QTRT2Q9H974 415 aaKnown RBP9.79□□□□□ -0.84
NAE1-207ENST00000562428 RFX1P22670 979 aa9.78□□□□□ -0.84
NAE1-207ENST00000562428 GRIK1P39086 918 aa9.78□□□□□ -0.84
NAE1-207ENST00000562428 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
NAE1-207ENST00000562428 RTCBQ9Y3I0 505 aaKnown RBP9.78□□□□□ -0.84
NAE1-207ENST00000562428 MMP20O60882 483 aa9.77□□□□□ -0.85
NAE1-207ENST00000562428 IGFBP4P22692 258 aa9.77□□□□□ -0.85
NAE1-207ENST00000562428 DBNDD2Q9BQY9 259 aa9.77□□□□□ -0.85
NAE1-207ENST00000562428 HOXD8P13378 290 aaPredicted RBP9.76□□□□□ -0.85
NAE1-207ENST00000562428 CDCA8Q53HL2 280 aa9.76□□□□□ -0.85
NAE1-207ENST00000562428 OGFOD2Q6N063 350 aa9.76□□□□□ -0.85
NAE1-207ENST00000562428 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
NAE1-207ENST00000562428 ADAMTSL4Q6UY14 1074 aa9.75□□□□□ -0.85
NAE1-207ENST00000562428 KIAA1211Q6ZU35 1233 aa9.75□□□□□ -0.85
NAE1-207ENST00000562428 ACAD11Q709F0 780 aa9.75□□□□□ -0.85
NAE1-207ENST00000562428 UTP4Q969X6 686 aaKnown RBP9.75□□□□□ -0.85
NAE1-207ENST00000562428 LINC01387J3KSC0 135 aa9.74□□□□□ -0.85
NAE1-207ENST00000562428 XYLBO75191 536 aa9.74□□□□□ -0.85
NAE1-207ENST00000562428 GHRHP01286 108 aa9.74□□□□□ -0.85
NAE1-207ENST00000562428 HOXA10P31260 410 aaPredicted RBP9.74□□□□□ -0.85
NAE1-207ENST00000562428 ABI1Q8IZP0 508 aa9.74□□□□□ -0.85
NAE1-207ENST00000562428 SHKBP1Q8TBC3 707 aa9.74□□□□□ -0.85
NAE1-207ENST00000562428 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
NAE1-207ENST00000562428 TXNDC11Q6PKC3 985 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 MYRFLQ96LU7 910 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 CEP41Q9BYV8 373 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 PPME1Q9Y570 386 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 KCNMB2Q9Y691 235 aa9.73□□□□□ -0.85
NAE1-207ENST00000562428 PSAPP07602 524 aa9.72□□□□□ -0.85
NAE1-207ENST00000562428 WEE1P30291 646 aa9.72□□□□□ -0.85
NAE1-207ENST00000562428 CD68P34810 354 aaPredicted RBP9.72□□□□□ -0.85
NAE1-207ENST00000562428 UVSSAQ2YD98 709 aa9.72□□□□□ -0.85
NAE1-207ENST00000562428 FOXO3O43524 673 aa9.71□□□□□ -0.86
NAE1-207ENST00000562428 SOX18P35713 384 aa9.71□□□□□ -0.86
NAE1-207ENST00000562428 ELOAQ14241 798 aaKnown RBP9.71□□□□□ -0.86
NAE1-207ENST00000562428 C11orf91Q3C1V1 193 aa9.71□□□□□ -0.86
NAE1-207ENST00000562428 CCDC97Q96F63 343 aaPredicted RBP9.71□□□□□ -0.86
NAE1-207ENST00000562428 SRPK2P78362 688 aaKnown RBP9.7□□□□□ -0.86
NAE1-207ENST00000562428 FAM20CQ8IXL6 584 aa9.7□□□□□ -0.86
NAE1-207ENST00000562428 CMTR1Q8N1G2 835 aaKnown RBP9.7□□□□□ -0.86
NAE1-207ENST00000562428 MYO19Q96H55 970 aa9.7□□□□□ -0.86
NAE1-207ENST00000562428 SERPINA10Q9UK55 444 aa9.7□□□□□ -0.86
NAE1-207ENST00000562428 LRFN2Q9ULH4 789 aa9.7□□□□□ -0.86
NAE1-207ENST00000562428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
NAE1-207ENST00000562428 C8AP07357 584 aa9.69□□□□□ -0.86
NAE1-207ENST00000562428 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
NAE1-207ENST00000562428 NFXL1Q6ZNB6 911 aa9.69□□□□□ -0.86
NAE1-207ENST00000562428 CLEC10AQ8IUN9 316 aa9.69□□□□□ -0.86
NAE1-207ENST00000562428 RGL4Q8IZJ4 473 aa9.69□□□□□ -0.86
NAE1-207ENST00000562428 FAM83CQ9BQN1 747 aa9.69□□□□□ -0.86
NAE1-207ENST00000562428 MUC3BQ9H195 1237 aa9.69□□□□□ -0.86
NAE1-207ENST00000562428 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
NAE1-207ENST00000562428 ADAM11O75078 769 aa9.68□□□□□ -0.86
NAE1-207ENST00000562428 SWI5Q1ZZU3 235 aa9.68□□□□□ -0.86
NAE1-207ENST00000562428 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
NAE1-207ENST00000562428 VTI1AQ96AJ9 217 aa9.68□□□□□ -0.86
NAE1-207ENST00000562428 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
NAE1-207ENST00000562428 DDX3YO15523 660 aaKnown RBP9.67□□□□□ -0.86
NAE1-207ENST00000562428 ATG7O95352 703 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms