RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 H7C1W4 665 aa16.47■□□□□ 0.23
RABGGTA-220ENST00000560998 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
RABGGTA-220ENST00000560998 KCNB2Q92953 911 aa16.47■□□□□ 0.23
RABGGTA-220ENST00000560998 A1BGP04217 495 aa16.46■□□□□ 0.23
RABGGTA-220ENST00000560998 BOLA2Q9H3K6 86 aa16.46■□□□□ 0.23
RABGGTA-220ENST00000560998 SNRKQ9NRH2 765 aa16.46■□□□□ 0.23
RABGGTA-220ENST00000560998 CCDC192P0DO97 292 aa16.46■□□□□ 0.22
RABGGTA-220ENST00000560998 TFCP2Q12800 502 aa16.46■□□□□ 0.22
RABGGTA-220ENST00000560998 NMIQ13287 307 aaPredicted RBP16.46■□□□□ 0.22
RABGGTA-220ENST00000560998 TNNI3KQ59H18 835 aa16.46■□□□□ 0.22
RABGGTA-220ENST00000560998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.46■□□□□ 0.22
RABGGTA-220ENST00000560998 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.22
RABGGTA-220ENST00000560998 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
RABGGTA-220ENST00000560998 FOXO4P98177 505 aa16.45■□□□□ 0.22
RABGGTA-220ENST00000560998 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
RABGGTA-220ENST00000560998 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-220ENST00000560998 RNF20Q5VTR2 975 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 GDPD2Q9HCC8 539 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 DBNLQ9UJU6 430 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 VGLL3A8MV65 326 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 ZSCAN22P10073 491 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 TNNT1P13805 278 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 ATP5JP18859 108 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 AK2P54819 239 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
RABGGTA-220ENST00000560998 AP5Z1O43299 807 aa16.43■□□□□ 0.22
RABGGTA-220ENST00000560998 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
RABGGTA-220ENST00000560998 TM6SF1Q9BZW5 370 aa16.43■□□□□ 0.22
RABGGTA-220ENST00000560998 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 RUFY3Q7L099 469 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 A0A0D9SFI3 127 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 ZBTB22O15209 634 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 PTGS1P23219 599 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 CNPY2Q9Y2B0 182 aa16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 RBM8AQ9Y5S9 174 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-220ENST00000560998 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
RABGGTA-220ENST00000560998 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-220ENST00000560998 ZSWIM6Q9HCJ5 1215 aa16.41■□□□□ 0.22
RABGGTA-220ENST00000560998 CPA1P15085 419 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 CREB3L3Q68CJ9 461 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 ITGB4P16144 1822 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 EDC3Q96F86 508 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 C16orf45Q96MC5 204 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 DBNDD2Q9BQY9 259 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 BTG4Q9NY30 223 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 JCADQ9P266 1359 aa16.4■□□□□ 0.22
RABGGTA-220ENST00000560998 COL14A1Q05707 1796 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 F13A1P00488 732 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 ERO1AQ96HE7 468 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 PDRG1Q9NUG6 133 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 CYP46A1Q9Y6A2 500 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 RFX7Q2KHR2 1363 aa16.39■□□□□ 0.21
RABGGTA-220ENST00000560998 NEMFO60524 1076 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 PIGBQ92521 554 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 HAUS7Q99871 368 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 ASAP1Q9ULH1 1129 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 TCHHQ07283 1943 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 SLC27A2O14975 620 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 STX6O43752 255 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 CDC25BP30305 580 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 LARP6Q9BRS8 491 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-220ENST00000560998 KMT5BQ4FZB7 885 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 CYP2C19P33261 490 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 IL15P40933 162 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
RABGGTA-220ENST00000560998 LARGE1O95461 756 aa16.36■□□□□ 0.21
RABGGTA-220ENST00000560998 FOXD4L6Q3SYB3 417 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-220ENST00000560998 FOXD4L3Q6VB84 417 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-220ENST00000560998 PLA2G4DQ86XP0 818 aa16.36■□□□□ 0.21
RABGGTA-220ENST00000560998 ZSCAN31Q96LW9 406 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-220ENST00000560998 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms