RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FAM160A1Q05DH4 1040 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 SCRN1Q12765 414 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 CREBRFQ8IUR6 639 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
TPM1-228ENST00000560975 FEZ2Q9UHY8 353 aaPredicted RBP19.24■□□□□ 0.67
TPM1-228ENST00000560975 KCNQ3O43525 872 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 URI1O94763 535 aaPredicted RBP19.23■□□□□ 0.67
TPM1-228ENST00000560975 SASH1O94885 1247 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 CHGBP05060 677 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 DPCR1Q3MIW9 517 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 KCND1Q9NSA2 647 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 ARGLU1Q9NWB6 273 aaPredicted RBP19.23■□□□□ 0.67
TPM1-228ENST00000560975 ORC3Q9UBD5 711 aaPredicted RBP19.23■□□□□ 0.67
TPM1-228ENST00000560975 A0A1B0GVL5 298 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 MLECQ14165 292 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
TPM1-228ENST00000560975 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
TPM1-228ENST00000560975 NUTM2GQ5VZR2 741 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 ERC1Q8IUD2 1116 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 NDUFB9Q9Y6M9 179 aa19.23■□□□□ 0.67
TPM1-228ENST00000560975 SPATA31D1Q6ZQQ2 1576 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 CCDC129Q6ZRS4 1044 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
TPM1-228ENST00000560975 ENGASEQ8NFI3 743 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
TPM1-228ENST00000560975 CHD2O14647 1828 aaKnown RBP19.22■□□□□ 0.67
TPM1-228ENST00000560975 ZRANB2O95218 330 aaKnown RBP eCLIP19.22■□□□□ 0.67
TPM1-228ENST00000560975 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
TPM1-228ENST00000560975 G3BP1Q13283 466 aaKnown RBP eCLIP19.22■□□□□ 0.67
TPM1-228ENST00000560975 CCDC150Q8NCX0 1101 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 SMARCE1Q969G3 411 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 CARD6Q9BX69 1037 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 ALDH8A1Q9H2A2 487 aaPredicted RBP19.22■□□□□ 0.67
TPM1-228ENST00000560975 USP6P35125 1406 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 SBNO1A3KN83 1393 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 USP31Q70CQ4 1352 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 TAF5LO75529 589 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 KRBA2Q6ZNG9 492 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 IMPACTQ9P2X3 320 aa19.22■□□□□ 0.67
TPM1-228ENST00000560975 PSDA5PKW4 1024 aaPredicted RBP19.21■□□□□ 0.67
TPM1-228ENST00000560975 TPM4P67936 248 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 SLC20A2Q08357 652 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 ISM2Q6H9L7 571 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 KLHDC4Q8TBB5 520 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 CCDC34Q96HJ3 373 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 HMG20BQ9P0W2 317 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 CACNA1FO60840 1977 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 PTPN21Q16825 1174 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 MAP3K2Q9Y2U5 619 aa19.21■□□□□ 0.67
TPM1-228ENST00000560975 ETF1P62495 437 aaKnown RBP19.2■□□□□ 0.66
TPM1-228ENST00000560975 ZBTB9Q96C00 473 aa19.2■□□□□ 0.66
TPM1-228ENST00000560975 TMX1Q9H3N1 280 aa19.2■□□□□ 0.66
TPM1-228ENST00000560975 NRDCO43847 1150 aa19.2■□□□□ 0.66
TPM1-228ENST00000560975 MED23Q9ULK4 1368 aa19.2■□□□□ 0.66
TPM1-228ENST00000560975 OAS2P29728 719 aaKnown RBP19.19■□□□□ 0.66
TPM1-228ENST00000560975 GOLGA8FQ08AF8 430 aa19.19■□□□□ 0.66
TPM1-228ENST00000560975 GOLGA8DPQ0D2H9 430 aa19.19■□□□□ 0.66
TPM1-228ENST00000560975 MTX1Q13505 466 aa19.19■□□□□ 0.66
TPM1-228ENST00000560975 NCOA5Q9HCD5 579 aaKnown RBP19.19■□□□□ 0.66
TPM1-228ENST00000560975 PTPDC1A2A3K4 754 aa19.19■□□□□ 0.66
TPM1-228ENST00000560975 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
TPM1-228ENST00000560975 GYS2P54840 703 aa19.19■□□□□ 0.66
TPM1-228ENST00000560975 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
TPM1-228ENST00000560975 SASH3O75995 380 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 NSUN7Q8NE18 718 aaKnown RBP19.18■□□□□ 0.66
TPM1-228ENST00000560975 LGR6Q9HBX8 967 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 PCDHA7Q9UN72 937 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 FANCGO15287 622 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 NDUFA8P51970 172 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 GNL2Q13823 731 aaKnown RBP19.18■□□□□ 0.66
TPM1-228ENST00000560975 KRT32Q14532 448 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 ZFP91Q96JP5 570 aaPredicted RBP19.18■□□□□ 0.66
TPM1-228ENST00000560975 ZNF396Q96N95 335 aaPredicted RBP19.18■□□□□ 0.66
TPM1-228ENST00000560975 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 EVCP57679 992 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 CERS3Q8IU89 383 aa19.18■□□□□ 0.66
TPM1-228ENST00000560975 MRPS27Q92552 414 aaKnown RBP19.18■□□□□ 0.66
TPM1-228ENST00000560975 N4BP2Q86UW6 1770 aaPredicted RBP19.17■□□□□ 0.66
TPM1-228ENST00000560975 FMR1NBQ8N0W7 255 aaPredicted RBP19.17■□□□□ 0.66
TPM1-228ENST00000560975 TXLNBQ8N3L3 684 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 SUCLG2Q96I99 432 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 SNRKQ9NRH2 765 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 COL15A1P39059 1388 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 TADA3O75528 432 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 CTDNEP1O95476 244 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 CYP21A2P08686 494 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 SMARCC2Q8TAQ2 1214 aa19.17■□□□□ 0.66
TPM1-228ENST00000560975 BICC1Q9H694 974 aaKnown RBP19.17■□□□□ 0.66
TPM1-228ENST00000560975 TNNT3P45378 269 aaPredicted RBP19.16■□□□□ 0.66
TPM1-228ENST00000560975 TSGA10IPQ3SY00 556 aa19.16■□□□□ 0.66
TPM1-228ENST00000560975 UTP14AQ9BVJ6 771 aaKnown RBP19.16■□□□□ 0.66
TPM1-228ENST00000560975 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
TPM1-228ENST00000560975 ATP1A3P13637 1013 aa19.16■□□□□ 0.66
TPM1-228ENST00000560975 SF3A1Q15459 793 aaKnown RBP19.16■□□□□ 0.66
TPM1-228ENST00000560975 PROSER3Q2NL68 480 aa19.16■□□□□ 0.66
TPM1-228ENST00000560975 NAA16Q6N069 864 aaPredicted RBP19.16■□□□□ 0.66
TPM1-228ENST00000560975 NGDNQ8NEJ9 315 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 589 ms