RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 IFIT2P09913 472 aaKnown RBP13.85□□□□□ -0.19
SNX1-212ENST00000560861 LDHAL6AQ6ZMR3 332 aa13.85□□□□□ -0.19
SNX1-212ENST00000560861 CNBD1Q8NA66 436 aa13.85□□□□□ -0.19
SNX1-212ENST00000560861 STK32BQ9NY57 414 aa13.85□□□□□ -0.19
SNX1-212ENST00000560861 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
SNX1-212ENST00000560861 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 TAF7LQ5H9L4 462 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 CCDC24Q8N4L8 307 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 DBNDD2Q9BQY9 259 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 CEP126Q9P2H0 1117 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
SNX1-212ENST00000560861 COL11A2P13942 1736 aaPredicted RBP13.84□□□□□ -0.19
SNX1-212ENST00000560861 AKAP11Q9UKA4 1901 aa13.84□□□□□ -0.19
SNX1-212ENST00000560861 CDC45O75419 566 aa13.83□□□□□ -0.2
SNX1-212ENST00000560861 GLRX3O76003 335 aaKnown RBP13.83□□□□□ -0.2
SNX1-212ENST00000560861 FGFR2P21802 821 aa13.83□□□□□ -0.2
SNX1-212ENST00000560861 GTF2E1P29083 439 aaPredicted RBP13.83□□□□□ -0.2
SNX1-212ENST00000560861 TBC1D9Q6ZT07 1266 aa13.83□□□□□ -0.2
SNX1-212ENST00000560861 LRRC37AA6NMS7 1700 aa13.83□□□□□ -0.2
SNX1-212ENST00000560861 MROH5Q6ZUA9 1318 aa13.83□□□□□ -0.2
SNX1-212ENST00000560861 A0A1B0GUL7 405 aa13.82□□□□□ -0.2
SNX1-212ENST00000560861 PSDA5PKW4 1024 aaPredicted RBP13.82□□□□□ -0.2
SNX1-212ENST00000560861 PDE8BO95263 885 aa13.82□□□□□ -0.2
SNX1-212ENST00000560861 ATP5JP18859 108 aa13.82□□□□□ -0.2
SNX1-212ENST00000560861 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
SNX1-212ENST00000560861 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
SNX1-212ENST00000560861 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
SNX1-212ENST00000560861 ERC2O15083 957 aa13.81□□□□□ -0.2
SNX1-212ENST00000560861 IGHMBP2P38935 993 aaKnown RBP13.81□□□□□ -0.2
SNX1-212ENST00000560861 TIMM10P62072 90 aa13.81□□□□□ -0.2
SNX1-212ENST00000560861 METTL24Q5JXM2 366 aa13.81□□□□□ -0.2
SNX1-212ENST00000560861 GPATCH3Q96I76 525 aa13.81□□□□□ -0.2
SNX1-212ENST00000560861 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
SNX1-212ENST00000560861 AKAP2Q9Y2D5 859 aa13.81□□□□□ -0.2
SNX1-212ENST00000560861 MMP10P09238 476 aa13.8□□□□□ -0.2
SNX1-212ENST00000560861 ADORA1P30542 326 aa13.8□□□□□ -0.2
SNX1-212ENST00000560861 ST5P78524 1137 aa13.8□□□□□ -0.2
SNX1-212ENST00000560861 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
SNX1-212ENST00000560861 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
SNX1-212ENST00000560861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNX1-212ENST00000560861 LTBP1Q14766 1721 aa13.8□□□□□ -0.2
SNX1-212ENST00000560861 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
SNX1-212ENST00000560861 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
SNX1-212ENST00000560861 XAGE2Q96GT9 111 aa13.79□□□□□ -0.2
SNX1-212ENST00000560861 MPHOSPH8Q99549 860 aa13.79□□□□□ -0.2
SNX1-212ENST00000560861 CHMLP26374 656 aa13.78□□□□□ -0.2
SNX1-212ENST00000560861 CHRNDQ07001 517 aa13.78□□□□□ -0.2
SNX1-212ENST00000560861 GRAPQ13588 217 aa13.78□□□□□ -0.2
SNX1-212ENST00000560861 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
SNX1-212ENST00000560861 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
SNX1-212ENST00000560861 GRAPLQ8TC17 118 aaPredicted RBP13.78□□□□□ -0.2
SNX1-212ENST00000560861 ZNF512BQ96KM6 892 aaPredicted RBP13.78□□□□□ -0.2
SNX1-212ENST00000560861 HAUS7Q99871 368 aa13.78□□□□□ -0.2
SNX1-212ENST00000560861 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
SNX1-212ENST00000560861 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
SNX1-212ENST00000560861 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
SNX1-212ENST00000560861 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
SNX1-212ENST00000560861 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
SNX1-212ENST00000560861 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
SNX1-212ENST00000560861 LPIN2Q92539 896 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 NEUROD6Q96NK8 337 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 BOLA2Q9H3K6 86 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 KIF13BQ9NQT8 1826 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 DLEC1Q9Y238 1755 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
SNX1-212ENST00000560861 MYH7P12883 1935 aa13.76□□□□□ -0.21
SNX1-212ENST00000560861 DOCK2Q92608 1830 aa13.76□□□□□ -0.21
SNX1-212ENST00000560861 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
SNX1-212ENST00000560861 CNTROBQ8N137 903 aa13.76□□□□□ -0.21
SNX1-212ENST00000560861 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
SNX1-212ENST00000560861 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
SNX1-212ENST00000560861 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
SNX1-212ENST00000560861 C10orf71Q711Q0 1435 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 SNAP23O00161 211 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 TAF5LO75529 589 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
SNX1-212ENST00000560861 SLC51AQ86UW1 340 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 RILPL2Q969X0 211 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
SNX1-212ENST00000560861 TBC1D32Q96NH3 1257 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 ESYT1Q9BSJ8 1104 aa13.75□□□□□ -0.21
SNX1-212ENST00000560861 MYO5AQ9Y4I1 1855 aaKnown RBP13.75□□□□□ -0.21
SNX1-212ENST00000560861 ZNF804BA4D1E1 1349 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 ZBTB22O15209 634 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 NPHP1O15259 732 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 SRGNP10124 158 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 SLC5A1P13866 664 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 SCARF1Q14162 830 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
SNX1-212ENST00000560861 IL25Q9H293 177 aa13.74□□□□□ -0.21
SNX1-212ENST00000560861 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 261 ms