RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 ITGA6P23229 1130 aa18.62■□□□□ 0.57
PSME1-207ENST00000560420 WASHC4Q2M389 1173 aa18.62■□□□□ 0.57
PSME1-207ENST00000560420 XDHP47989 1333 aa18.62■□□□□ 0.57
PSME1-207ENST00000560420 ZNF609O15014 1411 aa18.62■□□□□ 0.57
PSME1-207ENST00000560420 ZNF646O15015 1829 aaPredicted RBP18.62■□□□□ 0.57
PSME1-207ENST00000560420 PSME4Q14997 1843 aa18.62■□□□□ 0.57
PSME1-207ENST00000560420 EPHX2P34913 555 aa18.61■□□□□ 0.57
PSME1-207ENST00000560420 APLP1P51693 650 aa18.61■□□□□ 0.57
PSME1-207ENST00000560420 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
PSME1-207ENST00000560420 GPR101Q96P66 508 aaPredicted RBP18.61■□□□□ 0.57
PSME1-207ENST00000560420 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
PSME1-207ENST00000560420 UFL1O94874 794 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 NBPF7P0C2Y1 421 aaPredicted RBP18.6■□□□□ 0.57
PSME1-207ENST00000560420 RARSP54136 660 aaKnown RBP18.6■□□□□ 0.57
PSME1-207ENST00000560420 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 SLC4A10Q6U841 1118 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 EYA3Q99504 573 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 GPRC5DQ9NZD1 345 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 GGA1Q9UJY5 639 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 GJA3Q9Y6H8 435 aa18.6■□□□□ 0.57
PSME1-207ENST00000560420 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 PASKQ96RG2 1323 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 IRS2Q9Y4H2 1338 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 C6orf229H3BNL8 230 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 EPS15P42566 896 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 RABL6Q3YEC7 729 aaPredicted RBP18.59■□□□□ 0.57
PSME1-207ENST00000560420 CIAPIN1Q6FI81 312 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 SUCLG2Q96I99 432 aa18.59■□□□□ 0.57
PSME1-207ENST00000560420 RAD17O75943 681 aa18.58■□□□□ 0.56
PSME1-207ENST00000560420 ATP2B4P23634 1241 aa18.58■□□□□ 0.56
PSME1-207ENST00000560420 LMBR1LQ6UX01 489 aa18.58■□□□□ 0.56
PSME1-207ENST00000560420 PNMA8AQ86V59 439 aaPredicted RBP18.58■□□□□ 0.56
PSME1-207ENST00000560420 DBNDD1Q9H9R9 158 aa18.58■□□□□ 0.56
PSME1-207ENST00000560420 ANKIB1Q9P2G1 1089 aa18.58■□□□□ 0.56
PSME1-207ENST00000560420 RIMBP2O15034 1052 aa18.57■□□□□ 0.56
PSME1-207ENST00000560420 ECE2O60344 883 aa18.57■□□□□ 0.56
PSME1-207ENST00000560420 IGHMBP2P38935 993 aaKnown RBP18.57■□□□□ 0.56
PSME1-207ENST00000560420 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
PSME1-207ENST00000560420 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
PSME1-207ENST00000560420 KCNQ5Q9NR82 932 aa18.57■□□□□ 0.56
PSME1-207ENST00000560420 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
PSME1-207ENST00000560420 ANKRD18BA2A2Z9 1011 aa18.56■□□□□ 0.56
PSME1-207ENST00000560420 PSMD14O00487 310 aa18.56■□□□□ 0.56
PSME1-207ENST00000560420 ITGBL1O95965 494 aaPredicted RBP18.56■□□□□ 0.56
PSME1-207ENST00000560420 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
PSME1-207ENST00000560420 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
PSME1-207ENST00000560420 TNIP1Q15025 636 aa18.56■□□□□ 0.56
PSME1-207ENST00000560420 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
PSME1-207ENST00000560420 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
PSME1-207ENST00000560420 IFIT5Q13325 482 aaKnown RBP18.55■□□□□ 0.56
PSME1-207ENST00000560420 DOK7Q18PE1 504 aa18.55■□□□□ 0.56
PSME1-207ENST00000560420 USP50Q70EL3 339 aaPredicted RBP18.55■□□□□ 0.56
PSME1-207ENST00000560420 ZC3H12CQ9C0D7 883 aaKnown RBP18.55■□□□□ 0.56
PSME1-207ENST00000560420 NOB1Q9ULX3 412 aaKnown RBP18.55■□□□□ 0.56
PSME1-207ENST00000560420 LEMD3Q9Y2U8 911 aa18.55■□□□□ 0.56
PSME1-207ENST00000560420 VIL1P09327 827 aaKnown RBP18.54■□□□□ 0.56
PSME1-207ENST00000560420 LMOD1P29536 600 aaPredicted RBP18.54■□□□□ 0.56
PSME1-207ENST00000560420 CHRNDQ07001 517 aa18.54■□□□□ 0.56
PSME1-207ENST00000560420 TXNRD3Q86VQ6 643 aa18.54■□□□□ 0.56
PSME1-207ENST00000560420 ARHGAP45Q92619 1136 aa18.54■□□□□ 0.56
PSME1-207ENST00000560420 DPF2Q92785 391 aa18.54■□□□□ 0.56
PSME1-207ENST00000560420 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
PSME1-207ENST00000560420 ADARB2Q9NS39 739 aaKnown RBP18.54■□□□□ 0.56
PSME1-207ENST00000560420 KIF16BQ96L93 1317 aa18.53■□□□□ 0.56
PSME1-207ENST00000560420 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
PSME1-207ENST00000560420 HTRA3P83110 453 aa18.53■□□□□ 0.56
PSME1-207ENST00000560420 C15orf52Q6ZUT6 534 aaKnown RBP18.53■□□□□ 0.56
PSME1-207ENST00000560420 PGAP2Q9UHJ9 254 aa18.53■□□□□ 0.56
PSME1-207ENST00000560420 RPS12P25398 132 aaKnown RBP18.52■□□□□ 0.56
PSME1-207ENST00000560420 KLRK1P26718 216 aa18.52■□□□□ 0.56
PSME1-207ENST00000560420 HIRAP54198 1017 aaPredicted RBP18.52■□□□□ 0.56
PSME1-207ENST00000560420 EAPPQ56P03 285 aaPredicted RBP18.52■□□□□ 0.56
PSME1-207ENST00000560420 ZNF594Q96JF6 807 aaPredicted RBP18.52■□□□□ 0.56
PSME1-207ENST00000560420 GMLQ99445 158 aa18.52■□□□□ 0.56
PSME1-207ENST00000560420 MPHOSPH8Q99549 860 aa18.52■□□□□ 0.56
PSME1-207ENST00000560420 API5Q9BZZ5 524 aaKnown RBP18.52■□□□□ 0.56
PSME1-207ENST00000560420 ANKRD2Q9GZV1 360 aa18.52■□□□□ 0.56
PSME1-207ENST00000560420 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
PSME1-207ENST00000560420 ZNF804BA4D1E1 1349 aa18.51■□□□□ 0.55
PSME1-207ENST00000560420 PCNTO95613 3336 aa18.51■□□□□ 0.55
PSME1-207ENST00000560420 CCDC57Q2TAC2 916 aa18.51■□□□□ 0.55
PSME1-207ENST00000560420 PODNQ7Z5L7 613 aa18.51■□□□□ 0.55
PSME1-207ENST00000560420 TRPM4Q8TD43 1214 aa18.51■□□□□ 0.55
PSME1-207ENST00000560420 MAP1SQ66K74 1059 aaPredicted RBP18.5■□□□□ 0.55
PSME1-207ENST00000560420 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
PSME1-207ENST00000560420 CNOT7Q9UIV1 285 aaKnown RBP18.5■□□□□ 0.55
PSME1-207ENST00000560420 SNAP23O00161 211 aa18.49■□□□□ 0.55
PSME1-207ENST00000560420 INTS3Q68E01 1043 aaKnown RBP18.49■□□□□ 0.55
PSME1-207ENST00000560420 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
PSME1-207ENST00000560420 COA1Q9GZY4 146 aa18.49■□□□□ 0.55
PSME1-207ENST00000560420 CHMP3Q9Y3E7 222 aa18.49■□□□□ 0.55
PSME1-207ENST00000560420 RIPOR2Q9Y4F9 1068 aa18.49■□□□□ 0.55
PSME1-207ENST00000560420 BCAR3O75815 825 aa18.48■□□□□ 0.55
PSME1-207ENST00000560420 EGFRP00533 1210 aa18.48■□□□□ 0.55
PSME1-207ENST00000560420 TRIM27P14373 513 aa18.48■□□□□ 0.55
PSME1-207ENST00000560420 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
PSME1-207ENST00000560420 RSBN1LQ6PCB5 846 aaPredicted RBP18.48■□□□□ 0.55
PSME1-207ENST00000560420 LDHAL6AQ6ZMR3 332 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms