RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
MARK3-220ENST00000560417 SUV39H2Q9H5I1 410 aa9.2□□□□□ -0.94
MARK3-220ENST00000560417 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
MARK3-220ENST00000560417 EIF4BP23588 611 aaKnown RBP9.19□□□□□ -0.94
MARK3-220ENST00000560417 NRLP54845 237 aa9.19□□□□□ -0.94
MARK3-220ENST00000560417 PLAURQ03405 335 aa9.19□□□□□ -0.94
MARK3-220ENST00000560417 GAS6Q14393 721 aa9.19□□□□□ -0.94
MARK3-220ENST00000560417 GLIS3Q8NEA6 775 aa9.19□□□□□ -0.94
MARK3-220ENST00000560417 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
MARK3-220ENST00000560417 LATS2Q9NRM7 1088 aa9.19□□□□□ -0.94
MARK3-220ENST00000560417 A0A1W2PP55 124 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 ZBTB42B2RXF5 422 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
MARK3-220ENST00000560417 GPLD1P80108 840 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 GRM2Q14416 872 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 CEP120Q8N960 986 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 CRELD1Q96HD1 420 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 CNTNAP3BQ96NU0 1288 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 BCO2Q9BYV7 579 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 CNTNAP3Q9BZ76 1288 aa9.18□□□□□ -0.94
MARK3-220ENST00000560417 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
MARK3-220ENST00000560417 H3BM21 787 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 VSIG8P0DPA2 414 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 HYAL2Q12891 473 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 NXPE4Q6UWF7 544 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 SYT9Q86SS6 491 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
MARK3-220ENST00000560417 TMEM87AQ8NBN3 555 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 FAM8A1Q9UBU6 413 aa9.17□□□□□ -0.94
MARK3-220ENST00000560417 SIN3BO75182 1162 aa9.16□□□□□ -0.94
MARK3-220ENST00000560417 GADD45BO75293 160 aaPredicted RBP9.16□□□□□ -0.94
MARK3-220ENST00000560417 TNFRSF25Q93038 417 aa9.16□□□□□ -0.94
MARK3-220ENST00000560417 MDFIQ99750 246 aa9.16□□□□□ -0.94
MARK3-220ENST00000560417 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
MARK3-220ENST00000560417 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
MARK3-220ENST00000560417 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
MARK3-220ENST00000560417 NFKBIEO00221 500 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 BMP4P12644 408 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 ACPPP15309 386 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 MX2P20592 715 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 HDLBPQ00341 1268 aaKnown RBP9.15□□□□□ -0.94
MARK3-220ENST00000560417 FANCCQ00597 558 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 PRPF40BQ6NWY9 871 aaKnown RBP9.15□□□□□ -0.94
MARK3-220ENST00000560417 NCAPG2Q86XI2 1143 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 TCF12Q99081 682 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 ZKSCAN3Q9BRR0 538 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 DZANK1Q9NVP4 752 aa9.15□□□□□ -0.94
MARK3-220ENST00000560417 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
MARK3-220ENST00000560417 LOC102724428A0A0B4J2F2 783 aa9.14□□□□□ -0.95
MARK3-220ENST00000560417 SIK1P57059 783 aa9.14□□□□□ -0.95
MARK3-220ENST00000560417 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
MARK3-220ENST00000560417 NSUN5Q96P11 429 aaKnown RBP9.14□□□□□ -0.95
MARK3-220ENST00000560417 EHD4Q9H223 541 aa9.14□□□□□ -0.95
MARK3-220ENST00000560417 TRAK1Q9UPV9 953 aa9.14□□□□□ -0.95
MARK3-220ENST00000560417 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 ARAFP10398 606 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 PCSK7Q16549 785 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 CCNJLQ8IV13 435 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 C3orf58Q8NDZ4 430 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 OSMRQ99650 979 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 ABCB6Q9NP58 842 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 MBIPQ9NS73 344 aa9.13□□□□□ -0.95
MARK3-220ENST00000560417 DNAJB12Q9NXW2 375 aaKnown RBP9.13□□□□□ -0.95
MARK3-220ENST00000560417 ADARB2-AS1A8MUL3 147 aa9.12□□□□□ -0.95
MARK3-220ENST00000560417 PCBP4P57723 403 aaKnown RBP9.12□□□□□ -0.95
MARK3-220ENST00000560417 LIN7BQ9HAP6 207 aa9.12□□□□□ -0.95
MARK3-220ENST00000560417 J3QW42 95 aa9.11□□□□□ -0.95
MARK3-220ENST00000560417 MAP2K3P46734 347 aa9.11□□□□□ -0.95
MARK3-220ENST00000560417 ST13P50502 369 aaKnown RBP9.11□□□□□ -0.95
MARK3-220ENST00000560417 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
MARK3-220ENST00000560417 TMEM102Q8N9M5 508 aaPredicted RBP9.11□□□□□ -0.95
MARK3-220ENST00000560417 ANKRD24Q8TF21 1146 aa9.11□□□□□ -0.95
MARK3-220ENST00000560417 UBE2OQ9C0C9 1292 aaKnown RBP9.11□□□□□ -0.95
MARK3-220ENST00000560417 BHLHE41Q9C0J9 482 aaPredicted RBP9.11□□□□□ -0.95
MARK3-220ENST00000560417 TRPA1O75762 1119 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 ADH6P28332 368 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 GSTT1P30711 240 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 MLLT1Q03111 559 aaPredicted RBP9.1□□□□□ -0.95
MARK3-220ENST00000560417 RAD51AP2Q09MP3 1159 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 TAF1CQ15572 869 aaPredicted RBP9.1□□□□□ -0.95
MARK3-220ENST00000560417 RNFT1Q5M7Z0 435 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 RNF34Q969K3 372 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 HHIPQ96QV1 700 aa9.1□□□□□ -0.95
MARK3-220ENST00000560417 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 TERTO14746 1132 aaKnown RBP9.09□□□□□ -0.95
MARK3-220ENST00000560417 ZNF76P36508 570 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
MARK3-220ENST00000560417 ZNF787Q6DD87 383 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 HFE2Q6ZVN8 426 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 FCHSD1Q86WN1 690 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 PBX4Q9BYU1 374 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 PPP4R2Q9NY27 417 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 SLC6A14Q9UN76 642 aa9.09□□□□□ -0.95
MARK3-220ENST00000560417 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
MARK3-220ENST00000560417 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
MARK3-220ENST00000560417 ITPKAP23677 461 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms