RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CHRNA5P30532 468 aa16.86■□□□□ 0.29
HMBOX1-213ENST00000560269 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
HMBOX1-213ENST00000560269 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
HMBOX1-213ENST00000560269 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
HMBOX1-213ENST00000560269 APBB1O00213 710 aa16.85■□□□□ 0.29
HMBOX1-213ENST00000560269 TMC4Q7Z404 712 aa16.85■□□□□ 0.29
HMBOX1-213ENST00000560269 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 KCNA3P22001 575 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 TFCP2Q12800 502 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 VGLL2Q8N8G2 317 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 CNKSR1Q969H4 720 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 ZNF622Q969S3 477 aaKnown RBP eCLIP16.84■□□□□ 0.297e-10■□□□□ 10.9
HMBOX1-213ENST00000560269 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 CEP126Q9P2H0 1117 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 BRCA1P38398 1863 aaKnown RBP16.84■□□□□ 0.29
HMBOX1-213ENST00000560269 DPEP1P16444 411 aa16.83■□□□□ 0.28
HMBOX1-213ENST00000560269 CHRNDQ07001 517 aa16.83■□□□□ 0.28
HMBOX1-213ENST00000560269 METTL24Q5JXM2 366 aa16.83■□□□□ 0.28
HMBOX1-213ENST00000560269 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
HMBOX1-213ENST00000560269 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
HMBOX1-213ENST00000560269 SLX4Q8IY92 1834 aa16.82■□□□□ 0.28
HMBOX1-213ENST00000560269 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
HMBOX1-213ENST00000560269 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
HMBOX1-213ENST00000560269 PDE8BO95263 885 aa16.82■□□□□ 0.28
HMBOX1-213ENST00000560269 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
HMBOX1-213ENST00000560269 LNPKQ9C0E8 428 aa16.82■□□□□ 0.28
HMBOX1-213ENST00000560269 ZNF609O15014 1411 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 ANKRD2Q9GZV1 360 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 AKAP2Q9Y2D5 859 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 LTBP1Q14766 1721 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 ARAP2Q8WZ64 1704 aa16.81■□□□□ 0.28
HMBOX1-213ENST00000560269 FGFR2P21802 821 aa16.8■□□□□ 0.28
HMBOX1-213ENST00000560269 PDE4AP27815 886 aa16.8■□□□□ 0.28
HMBOX1-213ENST00000560269 TTLL6Q8N841 843 aa16.8■□□□□ 0.28
HMBOX1-213ENST00000560269 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
HMBOX1-213ENST00000560269 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
HMBOX1-213ENST00000560269 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
HMBOX1-213ENST00000560269 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
HMBOX1-213ENST00000560269 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
HMBOX1-213ENST00000560269 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
HMBOX1-213ENST00000560269 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 TAF5LO75529 589 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 AACSQ86V21 672 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 PODXL2Q9NZ53 605 aa16.78■□□□□ 0.28
HMBOX1-213ENST00000560269 XDHP47989 1333 aa16.77■□□□□ 0.28
HMBOX1-213ENST00000560269 TIMM10P62072 90 aa16.77■□□□□ 0.28
HMBOX1-213ENST00000560269 GPSM2P81274 684 aa16.77■□□□□ 0.28
HMBOX1-213ENST00000560269 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
HMBOX1-213ENST00000560269 LPIN2Q92539 896 aa16.77■□□□□ 0.28
HMBOX1-213ENST00000560269 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
HMBOX1-213ENST00000560269 SNED1Q8TER0 1413 aa16.77■□□□□ 0.27
HMBOX1-213ENST00000560269 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 SKAP1Q86WV1 359 aa16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 LEMD3Q9Y2U8 911 aa16.76■□□□□ 0.27
HMBOX1-213ENST00000560269 SLC5A1P13866 664 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 GRIPAP1Q4V328 841 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 ANKIB1Q9P2G1 1089 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 STAP2Q9UGK3 403 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 NSFL1CQ9UNZ2 370 aaKnown RBP16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 DUOX1Q9NRD9 1551 aa16.75■□□□□ 0.27
HMBOX1-213ENST00000560269 ZNF804BA4D1E1 1349 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 SNAP23O00161 211 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 MX1P20591 662 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 MPNDQ8N594 471 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 OSBPL3Q9H4L5 887 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
HMBOX1-213ENST00000560269 AOX1Q06278 1338 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 TTC41PQ6P2S7 1318 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 IRS2Q9Y4H2 1338 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 C21orf2O43822 256 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 KCNJ4P48050 445 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms