RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 GMPSP49915 693 aaPredicted RBP22.35■■□□□ 1.17
SMAD3-210ENST00000559092 CREBZFQ9NS37 354 aa22.35■■□□□ 1.17
SMAD3-210ENST00000559092 ADARB2Q9NS39 739 aaKnown RBP22.35■■□□□ 1.17
SMAD3-210ENST00000559092 ALDH1L1O75891 902 aa22.34■■□□□ 1.17
SMAD3-210ENST00000559092 ATP2B4P23634 1241 aa22.34■■□□□ 1.17
SMAD3-210ENST00000559092 TRMT2AQ8IZ69 625 aaKnown RBP22.34■■□□□ 1.17
SMAD3-210ENST00000559092 CNTROBQ8N137 903 aa22.34■■□□□ 1.17
SMAD3-210ENST00000559092 BCL2L13Q9BXK5 485 aa22.34■■□□□ 1.17
SMAD3-210ENST00000559092 COL4A1P02462 1669 aa22.33■■□□□ 1.17
SMAD3-210ENST00000559092 IGHMBP2P38935 993 aaKnown RBP22.33■■□□□ 1.17
SMAD3-210ENST00000559092 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.17
SMAD3-210ENST00000559092 DPF2Q92785 391 aa22.33■■□□□ 1.17
SMAD3-210ENST00000559092 DBNDD1Q9H9R9 158 aa22.33■■□□□ 1.17
SMAD3-210ENST00000559092 MINPP1Q9UNW1 487 aa22.33■■□□□ 1.17
SMAD3-210ENST00000559092 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 ECE2O60344 883 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 ITGA6P23229 1130 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 DOK7Q18PE1 504 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 JMYQ8N9B5 988 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 SRCIN1Q9C0H9 1055 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 TAF1P21675 1872 aa22.32■■□□□ 1.16
SMAD3-210ENST00000559092 PTPRCP08575 1304 aa22.31■■□□□ 1.16
SMAD3-210ENST00000559092 G3V3G9 751 aa22.31■■□□□ 1.16
SMAD3-210ENST00000559092 GRM8O00222 908 aa22.31■■□□□ 1.16
SMAD3-210ENST00000559092 CT47B1P0C2W7 299 aaPredicted RBP22.31■■□□□ 1.16
SMAD3-210ENST00000559092 RPS12P25398 132 aaKnown RBP22.31■■□□□ 1.16
SMAD3-210ENST00000559092 DCAF8Q5TAQ9 597 aa22.31■■□□□ 1.16
SMAD3-210ENST00000559092 MAP1SQ66K74 1059 aaPredicted RBP22.31■■□□□ 1.16
SMAD3-210ENST00000559092 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
SMAD3-210ENST00000559092 CDCA7LQ96GN5 454 aa22.31■■□□□ 1.16
SMAD3-210ENST00000559092 H7C1D1 291 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 PSMD14O00487 310 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 FOXO4P98177 505 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 FAM161AQ3B820 660 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 ALDH1L2Q3SY69 923 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 SSH1Q8WYL5 1049 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 GPR101Q96P66 508 aaPredicted RBP22.3■■□□□ 1.16
SMAD3-210ENST00000559092 MPHOSPH8Q99549 860 aa22.3■■□□□ 1.16
SMAD3-210ENST00000559092 C9orf78Q9NZ63 289 aaPredicted RBP22.3■■□□□ 1.16
SMAD3-210ENST00000559092 CNOT7Q9UIV1 285 aaKnown RBP22.3■■□□□ 1.16
SMAD3-210ENST00000559092 ANKRD18BA2A2Z9 1011 aa22.29■■□□□ 1.16
SMAD3-210ENST00000559092 ZC3H15Q8WU90 426 aaKnown RBP22.29■■□□□ 1.16
SMAD3-210ENST00000559092 ANKRD2Q9GZV1 360 aa22.29■■□□□ 1.16
SMAD3-210ENST00000559092 LEMD3Q9Y2U8 911 aa22.29■■□□□ 1.16
SMAD3-210ENST00000559092 TMEM88BA6NKF7 163 aa22.28■■□□□ 1.16
SMAD3-210ENST00000559092 VIL1P09327 827 aaKnown RBP22.28■■□□□ 1.16
SMAD3-210ENST00000559092 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
SMAD3-210ENST00000559092 PODNQ7Z5L7 613 aa22.28■■□□□ 1.16
SMAD3-210ENST00000559092 PGAP2Q9UHJ9 254 aa22.28■■□□□ 1.16
SMAD3-210ENST00000559092 CCT4P50991 539 aaKnown RBP22.27■■□□□ 1.16
SMAD3-210ENST00000559092 LTBP1Q14766 1721 aa22.27■■□□□ 1.16
SMAD3-210ENST00000559092 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
SMAD3-210ENST00000559092 KCNQ5Q9NR82 932 aa22.27■■□□□ 1.16
SMAD3-210ENST00000559092 ADAMTSL1Q8N6G6 1762 aa22.27■■□□□ 1.16
SMAD3-210ENST00000559092 MICALL2Q8IY33 904 aa22.26■■□□□ 1.15
SMAD3-210ENST00000559092 ZBTB12Q9Y330 459 aaPredicted RBP22.26■■□□□ 1.15
SMAD3-210ENST00000559092 LMBR1LQ6UX01 489 aa22.25■■□□□ 1.15
SMAD3-210ENST00000559092 UTYO14607 1347 aa22.25■■□□□ 1.15
SMAD3-210ENST00000559092 MED23Q9ULK4 1368 aa22.25■■□□□ 1.15
SMAD3-210ENST00000559092 CCDC57Q2TAC2 916 aa22.24■■□□□ 1.15
SMAD3-210ENST00000559092 WTIPA6NIX2 430 aaPredicted RBP22.23■■□□□ 1.15
SMAD3-210ENST00000559092 HIRAP54198 1017 aaPredicted RBP22.23■■□□□ 1.15
SMAD3-210ENST00000559092 EPHA10Q5JZY3 1008 aa22.23■■□□□ 1.15
SMAD3-210ENST00000559092 AGBL3Q8NEM8 1001 aa22.23■■□□□ 1.15
SMAD3-210ENST00000559092 CHMP3Q9Y3E7 222 aa22.23■■□□□ 1.15
SMAD3-210ENST00000559092 ZNF804BA4D1E1 1349 aa22.23■■□□□ 1.15
SMAD3-210ENST00000559092 BRPF1P55201 1214 aaPredicted RBP22.22■■□□□ 1.15
SMAD3-210ENST00000559092 CHRNDQ07001 517 aa22.22■■□□□ 1.15
SMAD3-210ENST00000559092 MIER1Q8N108 512 aa22.22■■□□□ 1.15
SMAD3-210ENST00000559092 COA1Q9GZY4 146 aa22.22■■□□□ 1.15
SMAD3-210ENST00000559092 SMC4Q9NTJ3 1288 aa22.22■■□□□ 1.15
SMAD3-210ENST00000559092 USP17L3A6NCW0 530 aa22.21■■□□□ 1.15
SMAD3-210ENST00000559092 USP17L4A6NCW7 530 aa22.21■■□□□ 1.15
SMAD3-210ENST00000559092 NBPF7P0C2Y1 421 aaPredicted RBP22.21■■□□□ 1.15
SMAD3-210ENST00000559092 RSBN1LQ6PCB5 846 aaPredicted RBP22.21■■□□□ 1.15
SMAD3-210ENST00000559092 USP17L1Q7RTZ2 530 aa22.21■■□□□ 1.15
SMAD3-210ENST00000559092 TRPM4Q8TD43 1214 aa22.21■■□□□ 1.15
SMAD3-210ENST00000559092 ZNF609O15014 1411 aa22.21■■□□□ 1.15
SMAD3-210ENST00000559092 SHTN1A0MZ66 631 aa22.2■■□□□ 1.14
SMAD3-210ENST00000559092 MKRN1Q9UHC7 482 aaKnown RBP22.2■■□□□ 1.14
SMAD3-210ENST00000559092 CNTNAP1P78357 1384 aa22.2■■□□□ 1.14
SMAD3-210ENST00000559092 PCNTO95613 3336 aa22.2■■□□□ 1.14
SMAD3-210ENST00000559092 KCNJ4P48050 445 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 TAF7LQ5H9L4 462 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 LDHAL6AQ6ZMR3 332 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 CDC37L1Q7L3B6 337 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 SAMD7Q7Z3H4 446 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 KAZALD1Q96I82 304 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 SUCLG2Q96I99 432 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 GMLQ99445 158 aa22.19■■□□□ 1.14
SMAD3-210ENST00000559092 ZNF280AP59817 542 aaPredicted RBP22.18■■□□□ 1.14
SMAD3-210ENST00000559092 TBC1D10BQ4KMP7 808 aaPredicted RBP22.18■■□□□ 1.14
SMAD3-210ENST00000559092 C15orf52Q6ZUT6 534 aaKnown RBP22.18■■□□□ 1.14
SMAD3-210ENST00000559092 RASSF10A6NK89 507 aa22.17■■□□□ 1.14
SMAD3-210ENST00000559092 MMP14P50281 582 aa22.17■■□□□ 1.14
SMAD3-210ENST00000559092 RABL6Q3YEC7 729 aaPredicted RBP22.17■■□□□ 1.14
SMAD3-210ENST00000559092 STRIP1Q5VSL9 837 aa22.17■■□□□ 1.14
SMAD3-210ENST00000559092 CST9Q5W186 159 aa22.17■■□□□ 1.14
SMAD3-210ENST00000559092 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
SMAD3-210ENST00000559092 USP44Q9H0E7 712 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms