RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SPEF2Q9C093 1822 aa26.43■■□□□ 1.82
CASC4-204ENST00000557945 SIRT2Q8IXJ6 389 aa26.43■■□□□ 1.82
CASC4-204ENST00000557945 COPRSQ9NQ92 184 aa26.43■■□□□ 1.82
CASC4-204ENST00000557945 EYA2O00167 538 aa26.42■■□□□ 1.82
CASC4-204ENST00000557945 LRRC24Q50LG9 513 aa26.42■■□□□ 1.82
CASC4-204ENST00000557945 ARHGAP27Q6ZUM4 889 aa26.42■■□□□ 1.82
CASC4-204ENST00000557945 RTKN2Q8IZC4 609 aa26.42■■□□□ 1.82
CASC4-204ENST00000557945 NSFL1CQ9UNZ2 370 aaKnown RBP26.42■■□□□ 1.82
CASC4-204ENST00000557945 GPSM2P81274 684 aa26.41■■□□□ 1.82
CASC4-204ENST00000557945 ANKIB1Q9P2G1 1089 aa26.41■■□□□ 1.82
CASC4-204ENST00000557945 ARFGEF1Q9Y6D6 1849 aa26.41■■□□□ 1.82
CASC4-204ENST00000557945 CHRNDQ07001 517 aa26.4■■□□□ 1.82
CASC4-204ENST00000557945 DPP8Q6V1X1 898 aaPredicted RBP26.4■■□□□ 1.82
CASC4-204ENST00000557945 MPNDQ8N594 471 aa26.4■■□□□ 1.82
CASC4-204ENST00000557945 GRIN3BO60391 1043 aa26.39■■□□□ 1.82
CASC4-204ENST00000557945 SURF6O75683 361 aaKnown RBP26.39■■□□□ 1.82
CASC4-204ENST00000557945 G3BP1Q13283 466 aaKnown RBP eCLIP26.39■■□□□ 1.82
CASC4-204ENST00000557945 GRIPAP1Q4V328 841 aa26.39■■□□□ 1.82
CASC4-204ENST00000557945 HELBQ8NG08 1087 aaPredicted RBP26.39■■□□□ 1.82
CASC4-204ENST00000557945 ANKRD2Q9GZV1 360 aa26.39■■□□□ 1.82
CASC4-204ENST00000557945 RIPOR2Q9Y4F9 1068 aa26.39■■□□□ 1.82
CASC4-204ENST00000557945 CIAO1O76071 339 aa26.38■■□□□ 1.81
CASC4-204ENST00000557945 OS9Q13438 667 aaPredicted RBP26.38■■□□□ 1.81
CASC4-204ENST00000557945 METTL24Q5JXM2 366 aa26.38■■□□□ 1.81
CASC4-204ENST00000557945 FBXO3Q9UK99 471 aa26.38■■□□□ 1.81
CASC4-204ENST00000557945 MROH5Q6ZUA9 1318 aa26.38■■□□□ 1.81
CASC4-204ENST00000557945 XDHP47989 1333 aa26.37■■□□□ 1.81
CASC4-204ENST00000557945 IL15P40933 162 aaPredicted RBP26.36■■□□□ 1.81
CASC4-204ENST00000557945 ATG9AQ7Z3C6 839 aa26.36■■□□□ 1.81
CASC4-204ENST00000557945 GOLGB1Q14789 3259 aaKnown RBP26.36■■□□□ 1.81
CASC4-204ENST00000557945 LRRC37AA6NMS7 1700 aa26.36■■□□□ 1.81
CASC4-204ENST00000557945 C6orf229H3BNL8 230 aa26.35■■□□□ 1.81
CASC4-204ENST00000557945 TAF5LO75529 589 aa26.35■■□□□ 1.81
CASC4-204ENST00000557945 TAOK3Q9H2K8 898 aa26.35■■□□□ 1.81
CASC4-204ENST00000557945 GGA1Q9UJY5 639 aa26.35■■□□□ 1.81
CASC4-204ENST00000557945 EXOC6BQ9Y2D4 811 aa26.35■■□□□ 1.81
CASC4-204ENST00000557945 NFKBIEO00221 500 aa26.34■■□□□ 1.81
CASC4-204ENST00000557945 UFL1O94874 794 aa26.34■■□□□ 1.81
CASC4-204ENST00000557945 KCNJ4P48050 445 aa26.34■■□□□ 1.81
CASC4-204ENST00000557945 FKBP4Q02790 459 aaKnown RBP eCLIP26.34■■□□□ 1.81
CASC4-204ENST00000557945 RASSF7Q02833 373 aa26.34■■□□□ 1.81
CASC4-204ENST00000557945 PODXL2Q9NZ53 605 aa26.34■■□□□ 1.81
CASC4-204ENST00000557945 NOP58Q9Y2X3 529 aaKnown RBP26.34■■□□□ 1.81
CASC4-204ENST00000557945 ATP2B4P23634 1241 aa26.33■■□□□ 1.81
CASC4-204ENST00000557945 CEP126Q9P2H0 1117 aa26.33■■□□□ 1.81
CASC4-204ENST00000557945 SNED1Q8TER0 1413 aa26.33■■□□□ 1.81
CASC4-204ENST00000557945 SUPT20HQ8NEM7 779 aa26.33■■□□□ 1.8
CASC4-204ENST00000557945 TBC1D16Q8TBP0 767 aa26.33■■□□□ 1.8
CASC4-204ENST00000557945 PSMD1Q99460 953 aa26.33■■□□□ 1.8
CASC4-204ENST00000557945 POLLQ9UGP5 575 aa26.33■■□□□ 1.8
CASC4-204ENST00000557945 HSP90AB4PQ58FF6 505 aa26.32■■□□□ 1.8
CASC4-204ENST00000557945 ZNF277Q9NRM2 450 aaPredicted RBP26.32■■□□□ 1.8
CASC4-204ENST00000557945 LEMD3Q9Y2U8 911 aa26.32■■□□□ 1.8
CASC4-204ENST00000557945 WTIPA6NIX2 430 aaPredicted RBP26.31■■□□□ 1.8
CASC4-204ENST00000557945 APBB1O00213 710 aa26.31■■□□□ 1.8
CASC4-204ENST00000557945 PDE8BO95263 885 aa26.31■■□□□ 1.8
CASC4-204ENST00000557945 GPR101Q96P66 508 aaPredicted RBP26.31■■□□□ 1.8
CASC4-204ENST00000557945 RTFDC1Q9BY42 306 aaPredicted RBP26.31■■□□□ 1.8
CASC4-204ENST00000557945 ZNF804BA4D1E1 1349 aa26.3■■□□□ 1.8
CASC4-204ENST00000557945 SNAP23O00161 211 aa26.3■■□□□ 1.8
CASC4-204ENST00000557945 TFCP2Q12800 502 aa26.3■■□□□ 1.8
CASC4-204ENST00000557945 HDAC1Q13547 482 aaPredicted RBP26.3■■□□□ 1.8
CASC4-204ENST00000557945 VGLL2Q8N8G2 317 aa26.3■■□□□ 1.8
CASC4-204ENST00000557945 RWDD1Q9H446 243 aaPredicted RBP26.3■■□□□ 1.8
CASC4-204ENST00000557945 LTBP3Q9NS15 1303 aa26.3■■□□□ 1.8
CASC4-204ENST00000557945 FER1L6Q2WGJ9 1857 aa26.29■■□□□ 1.8
CASC4-204ENST00000557945 ERC1Q8IUD2 1116 aa26.29■■□□□ 1.8
CASC4-204ENST00000557945 EYA3Q99504 573 aa26.29■■□□□ 1.8
CASC4-204ENST00000557945 RIMBP2O15034 1052 aa26.28■■□□□ 1.8
CASC4-204ENST00000557945 SASH1O94885 1247 aa26.28■■□□□ 1.8
CASC4-204ENST00000557945 DUOX1Q9NRD9 1551 aa26.27■■□□□ 1.8
CASC4-204ENST00000557945 PPIP5K2O43314 1243 aa26.27■■□□□ 1.8
CASC4-204ENST00000557945 PUM3Q15397 648 aaKnown RBP26.27■■□□□ 1.8
CASC4-204ENST00000557945 WASHC4Q2M389 1173 aa26.27■■□□□ 1.8
CASC4-204ENST00000557945 ZC3H12CQ9C0D7 883 aaKnown RBP26.27■■□□□ 1.8
CASC4-204ENST00000557945 DCTPP1Q9H773 170 aa26.27■■□□□ 1.8
CASC4-204ENST00000557945 LTBP1Q14766 1721 aa26.26■■□□□ 1.79
CASC4-204ENST00000557945 RAB11FIP3O75154 756 aa26.26■■□□□ 1.79
CASC4-204ENST00000557945 IARSP41252 1262 aaKnown RBP26.26■■□□□ 1.79
CASC4-204ENST00000557945 UBE4AQ14139 1066 aa26.26■■□□□ 1.79
CASC4-204ENST00000557945 AOC3Q16853 763 aa26.26■■□□□ 1.79
CASC4-204ENST00000557945 ATP2B3Q16720 1220 aa26.25■■□□□ 1.79
CASC4-204ENST00000557945 BCL11AQ9H165 835 aa26.25■■□□□ 1.79
CASC4-204ENST00000557945 AKAP2Q9Y2D5 859 aa26.25■■□□□ 1.79
CASC4-204ENST00000557945 A0A1B0GUL6 1792 aa26.25■■□□□ 1.79
CASC4-204ENST00000557945 IGHDP01880 384 aa26.24■■□□□ 1.79
CASC4-204ENST00000557945 LMNB1P20700 586 aa26.24■■□□□ 1.79
CASC4-204ENST00000557945 LARGE2Q8N3Y3 721 aa26.24■■□□□ 1.79
CASC4-204ENST00000557945 RHPN1Q8TCX5 695 aa26.24■■□□□ 1.79
CASC4-204ENST00000557945 KIF1BPQ96EK5 621 aa26.24■■□□□ 1.79
CASC4-204ENST00000557945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.24■■□□□ 1.79
CASC4-204ENST00000557945 IFIT1P09914 478 aaKnown RBP26.23■■□□□ 1.79
CASC4-204ENST00000557945 SLC5A1P13866 664 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 KLRK1P26718 216 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 PRELPP51888 382 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 KIAA2012Q0VF49 1180 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 LPIN2Q92539 896 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 VPS33BQ9H267 617 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 MED23Q9ULK4 1368 aa26.23■■□□□ 1.79
CASC4-204ENST00000557945 G3V3G9 751 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms