RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
SUPT16H-208ENST00000557652 HSP90AB4PQ58FF6 505 aa17.54■□□□□ 0.4
SUPT16H-208ENST00000557652 PSMD1Q99460 953 aa17.54■□□□□ 0.4
SUPT16H-208ENST00000557652 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
SUPT16H-208ENST00000557652 XDHP47989 1333 aa17.53■□□□□ 0.4
SUPT16H-208ENST00000557652 EYA2O00167 538 aa17.53■□□□□ 0.4
SUPT16H-208ENST00000557652 C21orf2O43822 256 aa17.53■□□□□ 0.4
SUPT16H-208ENST00000557652 NEFLP07196 543 aa17.53■□□□□ 0.4
SUPT16H-208ENST00000557652 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
SUPT16H-208ENST00000557652 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
SUPT16H-208ENST00000557652 IL15P40933 162 aaPredicted RBP17.52■□□□□ 0.4
SUPT16H-208ENST00000557652 MPNDQ8N594 471 aa17.52■□□□□ 0.4
SUPT16H-208ENST00000557652 MINPP1Q9UNW1 487 aa17.52■□□□□ 0.4
SUPT16H-208ENST00000557652 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
SUPT16H-208ENST00000557652 NOP58Q9Y2X3 529 aaKnown RBP17.52■□□□□ 0.4
SUPT16H-208ENST00000557652 PNMA6EA0A0J9YXQ4 647 aa17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 C1orf115Q9H7X2 142 aa17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 COL4A1P02462 1669 aa17.51■□□□□ 0.39
SUPT16H-208ENST00000557652 ATP2B4P23634 1241 aa17.5■□□□□ 0.39
SUPT16H-208ENST00000557652 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■□□□□ 8.7
SUPT16H-208ENST00000557652 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
SUPT16H-208ENST00000557652 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
SUPT16H-208ENST00000557652 EYA3Q99504 573 aa17.5■□□□□ 0.39
SUPT16H-208ENST00000557652 CHRNDQ07001 517 aa17.49■□□□□ 0.39
SUPT16H-208ENST00000557652 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
SUPT16H-208ENST00000557652 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
SUPT16H-208ENST00000557652 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
SUPT16H-208ENST00000557652 GGA1Q9UJY5 639 aa17.49■□□□□ 0.39
SUPT16H-208ENST00000557652 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
SUPT16H-208ENST00000557652 HDAC1Q13547 482 aaPredicted RBP17.48■□□□□ 0.39
SUPT16H-208ENST00000557652 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
SUPT16H-208ENST00000557652 EXOC6Q8TAG9 804 aa17.48■□□□□ 0.39
SUPT16H-208ENST00000557652 CEP126Q9P2H0 1117 aa17.48■□□□□ 0.39
SUPT16H-208ENST00000557652 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 RAB11FIP3O75154 756 aa17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 PDE8BO95263 885 aa17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 METTL24Q5JXM2 366 aa17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
SUPT16H-208ENST00000557652 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 NFKBIEO00221 500 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 LMNB1P20700 586 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 GPSM2P81274 684 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 ATG9AQ7Z3C6 839 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 GPR108Q9NPR9 543 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 AKAP2Q9Y2D5 859 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 ARAP2Q8WZ64 1704 aa17.46■□□□□ 0.39
SUPT16H-208ENST00000557652 KCNJ4P48050 445 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 TBC1D16Q8TBP0 767 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 RWDD1Q9H446 243 aaPredicted RBP17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 PCDHB15Q9Y5E8 787 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
SUPT16H-208ENST00000557652 PSME4Q14997 1843 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 ZBTB22O15209 634 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 UFL1O94874 794 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 SIL1Q9H173 461 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
SUPT16H-208ENST00000557652 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 WASHC4Q2M389 1173 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 LPIN2Q92539 896 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 ZC3H12CQ9C0D7 883 aaKnown RBP17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 MYH13Q9UKX3 1938 aa17.43■□□□□ 0.38
SUPT16H-208ENST00000557652 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
SUPT16H-208ENST00000557652 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
SUPT16H-208ENST00000557652 JDP2Q8WYK2 163 aa17.42■□□□□ 0.38
SUPT16H-208ENST00000557652 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
SUPT16H-208ENST00000557652 SLC5A1P13866 664 aa17.41■□□□□ 0.38
SUPT16H-208ENST00000557652 FGFR2P21802 821 aa17.41■□□□□ 0.38
SUPT16H-208ENST00000557652 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
SUPT16H-208ENST00000557652 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
SUPT16H-208ENST00000557652 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
SUPT16H-208ENST00000557652 TAF5LO75529 589 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 SASH1O94885 1247 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 IRX6P78412 446 aaPredicted RBP17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 NIM1KQ8IY84 436 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms