RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 LRP8Q14114 963 aa5.73□□□□□ -1.49
FOXN3-216ENST00000557496 TMEM164Q5U3C3 297 aa5.73□□□□□ -1.49
FOXN3-216ENST00000557496 GDF6Q6KF10 455 aaPredicted RBP5.73□□□□□ -1.49
FOXN3-216ENST00000557496 RBSNQ9H1K0 784 aa5.73□□□□□ -1.49
FOXN3-216ENST00000557496 SRA1Q9HD15 236 aaKnown RBP5.73□□□□□ -1.49
FOXN3-216ENST00000557496 PTCD1O75127 700 aaKnown RBP5.72□□□□□ -1.49
FOXN3-216ENST00000557496 DZIP1LQ8IYY4 767 aaKnown RBP5.72□□□□□ -1.49
FOXN3-216ENST00000557496 IL22RA1Q8N6P7 574 aa5.72□□□□□ -1.49
FOXN3-216ENST00000557496 OR13H1Q8NG92 308 aa5.72□□□□□ -1.49
FOXN3-216ENST00000557496 CLP1Q92989 425 aaKnown RBP5.72□□□□□ -1.49
FOXN3-216ENST00000557496 PSMG3-AS1Q96PY0 264 aa5.72□□□□□ -1.49
FOXN3-216ENST00000557496 MRPL18Q9H0U6 180 aaKnown RBP5.72□□□□□ -1.49
FOXN3-216ENST00000557496 AKTIPQ9H8T0 292 aa5.72□□□□□ -1.49
FOXN3-216ENST00000557496 TRIM33Q9UPN9 1127 aa5.72□□□□□ -1.49
FOXN3-216ENST00000557496 UBAP1LF5GYI3 381 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 F8W735 103 aaPredicted RBP5.71□□□□□ -1.5
FOXN3-216ENST00000557496 ZAP70P43403 619 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 SETDB1Q15047 1291 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 PRR23CQ6ZRP0 262 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 MAP4K3Q8IVH8 894 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 TMEM130Q8N3G9 435 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 PIK3R5Q8WYR1 880 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 FAM13BQ9NYF5 915 aa5.71□□□□□ -1.5
FOXN3-216ENST00000557496 NAA30Q147X3 362 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-216ENST00000557496 COL13A1Q5TAT6 717 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-216ENST00000557496 Q6ZS46 218 aa5.7□□□□□ -1.5
FOXN3-216ENST00000557496 CACTIN-AS1Q8N1I8 211 aa5.7□□□□□ -1.5
FOXN3-216ENST00000557496 DCAF11Q8TEB1 546 aa5.7□□□□□ -1.5
FOXN3-216ENST00000557496 ZBTB39O15060 712 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 HYAL3O43820 417 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-216ENST00000557496 ALX3O95076 343 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 KIF4AO95239 1232 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 ATP11AP98196 1134 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 MUC3BQ9H195 1237 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 STIM2Q9P246 746 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 SLAIN2Q9P270 581 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 RNF112Q9ULX5 631 aa5.69□□□□□ -1.5
FOXN3-216ENST00000557496 HYAL2Q12891 473 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 ADAMTSL4Q6UY14 1074 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.68□□□□□ -1.5
FOXN3-216ENST00000557496 NBPF11Q86T75 865 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 ABTB2Q8N961 1025 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 GPR152Q8TDT2 470 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 PBXIP1Q96AQ6 731 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 FNDC3AQ9Y2H6 1198 aaKnown RBP5.68□□□□□ -1.5
FOXN3-216ENST00000557496 PPME1Q9Y570 386 aa5.68□□□□□ -1.5
FOXN3-216ENST00000557496 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-216ENST00000557496 TM4SF5O14894 197 aa5.67□□□□□ -1.5
FOXN3-216ENST00000557496 AGGF1Q8N302 714 aaeCLIP5.67□□□□□ -1.5
FOXN3-216ENST00000557496 GALNT11Q8NCW6 608 aa5.67□□□□□ -1.5
FOXN3-216ENST00000557496 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
FOXN3-216ENST00000557496 ABI2Q9NYB9 513 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-216ENST00000557496 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 SMNDC1O75940 238 aaKnown RBP eCLIP5.66□□□□□ -1.5
FOXN3-216ENST00000557496 FSTP19883 344 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 ATP2B4P23634 1241 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 TTC39BQ5VTQ0 682 aaPredicted RBP5.66□□□□□ -1.5
FOXN3-216ENST00000557496 CEP135Q66GS9 1140 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 SPACA7Q96KW9 195 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 LACRTQ9GZZ8 138 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 RASSF4Q9H2L5 321 aa5.66□□□□□ -1.5
FOXN3-216ENST00000557496 WISP1O95388 367 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 CYP2E1P05181 493 aaPredicted RBP5.65□□□□□ -1.5
FOXN3-216ENST00000557496 GLB1P16278 677 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 CDC27P30260 824 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 SCNN1AP37088 669 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 PDE12Q6L8Q7 609 aaKnown RBP5.65□□□□□ -1.5
FOXN3-216ENST00000557496 TXNDC11Q6PKC3 985 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 SLC51AQ86UW1 340 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 CEP120Q8N960 986 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 NUDT16Q96DE0 195 aaKnown RBP5.65□□□□□ -1.5
FOXN3-216ENST00000557496 PBX4Q9BYU1 374 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 TMEM63CQ9P1W3 806 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 SEPT3Q9UH03 358 aa5.65□□□□□ -1.5
FOXN3-216ENST00000557496 EPHA1P21709 976 aa5.64□□□□□ -1.51
FOXN3-216ENST00000557496 CD68P34810 354 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-216ENST00000557496 ATCAYQ86WG3 371 aa5.64□□□□□ -1.51
FOXN3-216ENST00000557496 UBL7Q96S82 380 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-216ENST00000557496 ELP3Q9H9T3 547 aa5.64□□□□□ -1.51
FOXN3-216ENST00000557496 KCNK4Q9NYG8 393 aa5.64□□□□□ -1.51
FOXN3-216ENST00000557496 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
FOXN3-216ENST00000557496 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
FOXN3-216ENST00000557496 HELQQ8TDG4 1101 aa5.63□□□□□ -1.51
FOXN3-216ENST00000557496 CCDC97Q96F63 343 aaPredicted RBP5.63□□□□□ -1.51
FOXN3-216ENST00000557496 CARD10Q9BWT7 1032 aa5.63□□□□□ -1.51
FOXN3-216ENST00000557496 ZMYND15Q9H091 742 aa5.63□□□□□ -1.51
FOXN3-216ENST00000557496 KANSL3Q9P2N6 904 aa5.63□□□□□ -1.51
FOXN3-216ENST00000557496 FSCN2O14926 492 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 ADAM11O75078 769 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 UVSSAQ2YD98 709 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 XKR5Q6UX68 686 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 ACAD11Q709F0 780 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 ZNF438Q7Z4V0 828 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 ARMC10Q8N2F6 343 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 KLHL23Q8NBE8 558 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 POP1Q99575 1024 aaKnown RBP5.62□□□□□ -1.51
FOXN3-216ENST00000557496 ADAM19Q9H013 955 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 CNTN3Q9P232 1028 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 SERPINA10Q9UK55 444 aa5.62□□□□□ -1.51
FOXN3-216ENST00000557496 RAXQ9Y2V3 346 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms