RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 LINS1Q8NG48 757 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 PPM1EQ8WY54 764 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 SYNCQ9H7C4 482 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 MAST1Q9Y2H9 1570 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 ARHGEF12Q9NZN5 1544 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 RBM28Q9NW13 759 aaKnown RBP9.57□□□□□ -0.88
CHD8-213ENST00000557364 ZBTB43O43298 467 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 TOP1P11387 765 aaKnown RBP9.57□□□□□ -0.88
CHD8-213ENST00000557364 SNX16P57768 344 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 LUZP1Q86V48 1076 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 TAX1BP1Q86VP1 789 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 WDR62O43379 1518 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 HOXB7P09629 217 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 CRACR2AQ9BSW2 395 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 H0YIN7 160 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 USP8P40818 1118 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 PPP1R2P41236 205 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 RTN1Q16799 776 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 BMP2KLQ5H9B9 411 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 CALRP27797 417 aaKnown RBP9.56□□□□□ -0.88
CHD8-213ENST00000557364 RBM26Q5T8P6 1007 aaKnown RBP9.56□□□□□ -0.88
CHD8-213ENST00000557364 CCDC102BQ68D86 513 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 FERP16591 822 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 VEZTQ9HBM0 779 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 KCNG4Q8TDN1 519 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 IP6K1Q92551 441 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 TNFAIP1Q13829 316 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 BMS1Q14692 1282 aaKnown RBP9.56□□□□□ -0.88
CHD8-213ENST00000557364 MCMDC2Q4G0Z9 681 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 IVNS1ABPQ9Y6Y0 642 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 PHACTR2O75167 634 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 STX1AQ16623 288 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 NUP88Q99567 741 aaPredicted RBP9.56□□□□□ -0.88
CHD8-213ENST00000557364 SLC4A4Q9Y6R1 1079 aa9.56□□□□□ -0.88
CHD8-213ENST00000557364 TAF12Q16514 161 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 TCERG1LQ5VWI1 586 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 PLXNC1O60486 1568 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 TBC1D22AQ8WUA7 517 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 BIN2Q9UBW5 565 aaPredicted RBP9.55□□□□□ -0.88
CHD8-213ENST00000557364 CCNL1Q9UK58 526 aaPredicted RBP9.55□□□□□ -0.88
CHD8-213ENST00000557364 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 WDR66Q8TBY9 1149 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 SLC8A3P57103 927 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 TDRD12Q587J7 1177 aaKnown RBP9.55□□□□□ -0.88
CHD8-213ENST00000557364 KIAA1524Q8TCG1 905 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 ADGBQ8N7X0 1667 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 SMC1AQ14683 1233 aaKnown RBP9.55□□□□□ -0.88
CHD8-213ENST00000557364 DYDC1Q8WWB3 177 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
CHD8-213ENST00000557364 ORC3Q9UBD5 711 aaPredicted RBP9.55□□□□□ -0.88
CHD8-213ENST00000557364 FSD2A1L4K1 749 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 IDEP14735 1019 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 PLS1Q14651 629 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 SPC24Q8NBT2 197 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 BACH2Q9BYV9 841 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
CHD8-213ENST00000557364 PRC1O43663 620 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 CA8P35219 290 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 COPS6Q7L5N1 327 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 IKBKGQ9Y6K9 419 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 YEATS2Q9ULM3 1422 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 GNPATO15228 680 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 GCP02774 474 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 MICU3Q86XE3 530 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.54□□□□□ -0.883e-6■□□□□ 9.1
CHD8-213ENST00000557364 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 HACE1Q8IYU2 909 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 VSIG10Q8N0Z9 540 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
CHD8-213ENST00000557364 SPC25Q9HBM1 224 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 NSFL1CQ9UNZ2 370 aaKnown RBP9.54□□□□□ -0.88
CHD8-213ENST00000557364 NAPAP54920 295 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 VAT1LQ9HCJ6 419 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 RAD50Q92878 1312 aa9.54□□□□□ -0.88
CHD8-213ENST00000557364 STAT6P42226 847 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 KLHL10Q6JEL2 608 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
CHD8-213ENST00000557364 PABPC4Q13310 644 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHD8-213ENST00000557364 CCDC14Q49A88 953 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 SLC26A6Q9BXS9 759 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 ZFYVE16Q7Z3T8 1539 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 BICDL2A1A5D9 508 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 LPXNO60711 386 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
CHD8-213ENST00000557364 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
CHD8-213ENST00000557364 MCTP2Q6DN12 878 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms