RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 CCDC85AQ96PX6 553 aaPredicted RBP31.49■■■□□ 2.63
PPP4R4-204ENST00000555690 MAP3K2Q9Y2U5 619 aa31.49■■■□□ 2.63
PPP4R4-204ENST00000555690 PDE8AO60658 829 aa31.48■■■□□ 2.63
PPP4R4-204ENST00000555690 ECE1P42892 770 aa31.48■■■□□ 2.63
PPP4R4-204ENST00000555690 CCDC152Q4G0S7 254 aa31.48■■■□□ 2.63
PPP4R4-204ENST00000555690 PODXL2Q9NZ53 605 aa31.47■■■□□ 2.63
PPP4R4-204ENST00000555690 ANKIB1Q9P2G1 1089 aa31.47■■■□□ 2.63
PPP4R4-204ENST00000555690 CDC37L1Q7L3B6 337 aa31.46■■■□□ 2.63
PPP4R4-204ENST00000555690 SAMD7Q7Z3H4 446 aa31.46■■■□□ 2.63
PPP4R4-204ENST00000555690 ZC3H12CQ9C0D7 883 aaKnown RBP31.46■■■□□ 2.63
PPP4R4-204ENST00000555690 RTL9Q8NET4 1388 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 PI4KAP2A4QPH2 592 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 KSR2Q6VAB6 950 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 SAPCD2Q86UD0 394 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 WWC1Q8IX03 1113 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 PI4KAP1Q8N8J0 262 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 ZNF408Q9H9D4 720 aa31.45■■■□□ 2.63
PPP4R4-204ENST00000555690 UFL1O94874 794 aa31.44■■■□□ 2.62
PPP4R4-204ENST00000555690 HSPA8P11142 646 aaKnown RBP31.44■■■□□ 2.62
PPP4R4-204ENST00000555690 CCDC27Q2M243 656 aa31.44■■■□□ 2.62
PPP4R4-204ENST00000555690 RPS12P25398 132 aaKnown RBP31.43■■■□□ 2.62
PPP4R4-204ENST00000555690 TBC1D10BQ4KMP7 808 aaPredicted RBP31.43■■■□□ 2.62
PPP4R4-204ENST00000555690 STK31Q9BXU1 1019 aa31.43■■■□□ 2.62
PPP4R4-204ENST00000555690 GGA1Q9UJY5 639 aa31.43■■■□□ 2.62
PPP4R4-204ENST00000555690 EGFRP00533 1210 aa31.42■■■□□ 2.62
PPP4R4-204ENST00000555690 IGKV5-2P06315 115 aa31.42■■■□□ 2.62
PPP4R4-204ENST00000555690 USP48Q86UV5 1035 aa31.42■■■□□ 2.62
PPP4R4-204ENST00000555690 AOC2O75106 756 aa31.41■■■□□ 2.62
PPP4R4-204ENST00000555690 RBM26Q5T8P6 1007 aaKnown RBP31.41■■■□□ 2.62
PPP4R4-204ENST00000555690 G3V3G9 751 aa31.4■■■□□ 2.62
PPP4R4-204ENST00000555690 TWISTNBQ3B726 338 aaPredicted RBP31.4■■■□□ 2.62
PPP4R4-204ENST00000555690 DCAF8Q5TAQ9 597 aa31.4■■■□□ 2.62
PPP4R4-204ENST00000555690 DLK2Q6UY11 383 aa31.4■■■□□ 2.62
PPP4R4-204ENST00000555690 ANKRD18AQ8IVF6 992 aa31.4■■■□□ 2.62
PPP4R4-204ENST00000555690 G2E3Q7L622 706 aa31.39■■■□□ 2.62
PPP4R4-204ENST00000555690 VIL1P09327 827 aaKnown RBP31.38■■■□□ 2.61
PPP4R4-204ENST00000555690 CTSWP56202 376 aa31.38■■■□□ 2.61
PPP4R4-204ENST00000555690 NEXNQ0ZGT2 675 aa31.38■■■□□ 2.61
PPP4R4-204ENST00000555690 CWF19L2Q2TBE0 894 aaKnown RBP31.38■■■□□ 2.61
PPP4R4-204ENST00000555690 BEGAINQ9BUH8 593 aa31.38■■■□□ 2.61
PPP4R4-204ENST00000555690 SLC4A2P04920 1241 aa31.37■■■□□ 2.61
PPP4R4-204ENST00000555690 THSD7BQ9C0I4 1608 aa31.37■■■□□ 2.61
PPP4R4-204ENST00000555690 SCN9AQ15858 1988 aa31.37■■■□□ 2.61
PPP4R4-204ENST00000555690 XDHP47989 1333 aa31.36■■■□□ 2.61
PPP4R4-204ENST00000555690 MAP2K2P36507 400 aa31.36■■■□□ 2.61
PPP4R4-204ENST00000555690 KRT26Q7Z3Y9 468 aa31.36■■■□□ 2.61
PPP4R4-204ENST00000555690 TTLL11Q8NHH1 800 aa31.36■■■□□ 2.61
PPP4R4-204ENST00000555690 HHIPL1Q96JK4 782 aa31.36■■■□□ 2.61
PPP4R4-204ENST00000555690 IL16Q14005 1332 aa31.35■■■□□ 2.61
PPP4R4-204ENST00000555690 CDC5LQ99459 802 aaKnown RBP31.35■■■□□ 2.61
PPP4R4-204ENST00000555690 MRS2Q9HD23 443 aa31.35■■■□□ 2.61
PPP4R4-204ENST00000555690 NEURL1BA8MQ27 555 aa31.34■■■□□ 2.61
PPP4R4-204ENST00000555690 DCPSQ96C86 337 aaKnown RBP31.34■■■□□ 2.61
PPP4R4-204ENST00000555690 GREM2Q9H772 168 aa31.34■■■□□ 2.61
PPP4R4-204ENST00000555690 ATP2B4P23634 1241 aa31.33■■■□□ 2.61
PPP4R4-204ENST00000555690 KIF4BQ2VIQ3 1234 aa31.33■■■□□ 2.61
PPP4R4-204ENST00000555690 WTIPA6NIX2 430 aaPredicted RBP31.32■■■□□ 2.6
PPP4R4-204ENST00000555690 POLR2AP24928 1970 aaKnown RBP31.31■■■□□ 2.6
PPP4R4-204ENST00000555690 ADM5C9JUS6 153 aa31.31■■■□□ 2.6
PPP4R4-204ENST00000555690 NCBP3Q53F19 620 aaKnown RBP31.31■■■□□ 2.6
PPP4R4-204ENST00000555690 UBE3BQ7Z3V4 1068 aa31.31■■■□□ 2.6
PPP4R4-204ENST00000555690 SALL2Q9Y467 1007 aaPredicted RBP31.31■■■□□ 2.6
PPP4R4-204ENST00000555690 H7C1W4 665 aa31.3■■■□□ 2.6
PPP4R4-204ENST00000555690 HUNKP57058 714 aa31.3■■■□□ 2.6
PPP4R4-204ENST00000555690 RSBN1LQ6PCB5 846 aaPredicted RBP31.3■■■□□ 2.6
PPP4R4-204ENST00000555690 BSDC1Q9NW68 430 aaPredicted RBP31.3■■■□□ 2.6
PPP4R4-204ENST00000555690 TSKSQ9UJT2 592 aa31.3■■■□□ 2.6
PPP4R4-204ENST00000555690 MINPP1Q9UNW1 487 aa31.3■■■□□ 2.6
PPP4R4-204ENST00000555690 FLIIQ13045 1269 aa31.29■■■□□ 2.6
PPP4R4-204ENST00000555690 AGBL3Q8NEM8 1001 aa31.29■■■□□ 2.6
PPP4R4-204ENST00000555690 ASTN2O75129 1339 aaPredicted RBP31.28■■■□□ 2.6
PPP4R4-204ENST00000555690 FANCIQ9NVI1 1328 aa31.28■■■□□ 2.6
PPP4R4-204ENST00000555690 GGA3Q9NZ52 723 aa31.28■■■□□ 2.6
PPP4R4-204ENST00000555690 ZNF280AP59817 542 aaPredicted RBP31.27■■■□□ 2.6
PPP4R4-204ENST00000555690 GCKRQ14397 625 aa31.27■■■□□ 2.6
PPP4R4-204ENST00000555690 PODNQ7Z5L7 613 aa31.27■■■□□ 2.6
PPP4R4-204ENST00000555690 GBA2Q9HCG7 927 aaPredicted RBP31.27■■■□□ 2.6
PPP4R4-204ENST00000555690 ANP32CO43423 234 aa31.26■■■□□ 2.59
PPP4R4-204ENST00000555690 FKBP5Q13451 457 aaPredicted RBP31.26■■■□□ 2.59
PPP4R4-204ENST00000555690 USP17L3A6NCW0 530 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 USP17L4A6NCW7 530 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 USP17L1Q7RTZ2 530 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 SULF1Q8IWU6 871 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 C2orf69Q8N8R5 385 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 ZIC5Q96T25 663 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 GMLQ99445 158 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 MYH3P11055 1940 aa31.25■■■□□ 2.59
PPP4R4-204ENST00000555690 CCT4P50991 539 aaKnown RBP31.24■■■□□ 2.59
PPP4R4-204ENST00000555690 BRPF1P55201 1214 aaPredicted RBP31.24■■■□□ 2.59
PPP4R4-204ENST00000555690 SCARF1Q14162 830 aa31.24■■■□□ 2.59
PPP4R4-204ENST00000555690 DNAAF4Q8WXU2 420 aa31.24■■■□□ 2.59
PPP4R4-204ENST00000555690 ZNF609O15014 1411 aa31.24■■■□□ 2.59
PPP4R4-204ENST00000555690 MED23Q9ULK4 1368 aa31.23■■■□□ 2.59
PPP4R4-204ENST00000555690 VAMP4O75379 141 aa31.23■■■□□ 2.59
PPP4R4-204ENST00000555690 USP17L8P0C7I0 530 aa31.23■■■□□ 2.59
PPP4R4-204ENST00000555690 NOGQ13253 232 aa31.23■■■□□ 2.59
PPP4R4-204ENST00000555690 WDR63Q8IWG1 891 aa31.23■■■□□ 2.59
PPP4R4-204ENST00000555690 IGHMBP2P38935 993 aaKnown RBP31.22■■■□□ 2.59
PPP4R4-204ENST00000555690 CASP7P55210 303 aa31.22■■■□□ 2.59
PPP4R4-204ENST00000555690 EXOSC9Q06265 439 aaKnown RBP31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms