RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 IGHMBP2P38935 993 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 MSL1Q68DK7 614 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 CCDC8Q9H0W5 538 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 CEP126Q9P2H0 1117 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
HNRNPC-220ENST00000555585 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 DDR1Q08345 913 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 OSBPL3Q9H4L5 887 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-220ENST00000555585 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 BACH2Q9BYV9 841 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 AOX1Q06278 1338 aa11.83□□□□□ -0.52
HNRNPC-220ENST00000555585 ERC2O15083 957 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 MMP10P09238 476 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 ECHDC1Q9NTX5 307 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 AKAP2Q9Y2D5 859 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 TAF1P21675 1872 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 LRP5O75197 1615 aa11.82□□□□□ -0.52
HNRNPC-220ENST00000555585 RIC1Q4ADV7 1423 aa11.81□□□□□ -0.52
HNRNPC-220ENST00000555585 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
HNRNPC-220ENST00000555585 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-220ENST00000555585 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
HNRNPC-220ENST00000555585 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 ZNF609O15014 1411 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 A0A1B0GUL7 405 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 GLRX3O76003 335 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 SDSP20132 328 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 TIMM10P62072 90 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 PI4K2BQ8TCG2 481 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 AK9Q5TCS8 1911 aa11.8□□□□□ -0.52
HNRNPC-220ENST00000555585 COL4A1P02462 1669 aa11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 CDC45O75419 566 aa11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 PDE8BO95263 885 aa11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 MAP4K4O95819 1239 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 RBM17Q96I25 401 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 BSDC1Q9NW68 430 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-220ENST00000555585 ANKRD31Q8N7Z5 1873 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 TAF5LO75529 589 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 CHRNDQ07001 517 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 GRAPQ13588 217 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 CNTROBQ8N137 903 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 XAGE2Q96GT9 111 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 BRIP1Q9BX63 1249 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
HNRNPC-220ENST00000555585 A0A1B0GUL6 1792 aa11.77□□□□□ -0.52
HNRNPC-220ENST00000555585 SLC5A1P13866 664 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 ATP5JP18859 108 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 ADORA1P30542 326 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 PDE6BP35913 854 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 PUM3Q15397 648 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 TTC39AQ5SRH9 613 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
HNRNPC-220ENST00000555585 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 CRY2Q49AN0 593 aa11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 LPIN2Q92539 896 aa11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 ARAP2Q8WZ64 1704 aa11.76□□□□□ -0.53
HNRNPC-220ENST00000555585 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms