RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 BEND3Q5T5X7 828 aa15.06■□□□□ 0
VRK1-204ENST00000555351 CNTROBQ8N137 903 aa15.06■□□□□ 0
VRK1-204ENST00000555351 ZC3H15Q8WU90 426 aaKnown RBP15.06■□□□□ 0
VRK1-204ENST00000555351 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
VRK1-204ENST00000555351 ANKIB1Q9P2G1 1089 aa15.06■□□□□ 0
VRK1-204ENST00000555351 ZNF609O15014 1411 aa15.06■□□□□ 0
VRK1-204ENST00000555351 ALDH1L1O75891 902 aa15.05■□□□□ -0
VRK1-204ENST00000555351 ATP2B4P23634 1241 aa15.05■□□□□ -0
VRK1-204ENST00000555351 GMPSP49915 693 aaPredicted RBP15.05■□□□□ -0
VRK1-204ENST00000555351 HTRA3P83110 453 aa15.05■□□□□ -0
VRK1-204ENST00000555351 SLFN5Q08AF3 891 aa15.05■□□□□ -0
VRK1-204ENST00000555351 GREM2Q9H772 168 aa15.05■□□□□ -0
VRK1-204ENST00000555351 PGAP2Q9UHJ9 254 aa15.05■□□□□ -0
VRK1-204ENST00000555351 ECE2O60344 883 aa15.04■□□□□ -0
VRK1-204ENST00000555351 RAD17O75943 681 aa15.04■□□□□ -0
VRK1-204ENST00000555351 UFL1O94874 794 aa15.04■□□□□ -0
VRK1-204ENST00000555351 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
VRK1-204ENST00000555351 TMEM88BA6NKF7 163 aa15.03■□□□□ -0
VRK1-204ENST00000555351 IGHMBP2P38935 993 aaKnown RBP15.03■□□□□ -0
VRK1-204ENST00000555351 CCDC85AQ96PX6 553 aaPredicted RBP15.03■□□□□ -0
VRK1-204ENST00000555351 DBNDD1Q9H9R9 158 aa15.03■□□□□ -0
VRK1-204ENST00000555351 MINPP1Q9UNW1 487 aa15.03■□□□□ -0
VRK1-204ENST00000555351 MED23Q9ULK4 1368 aa15.02■□□□□ -0
VRK1-204ENST00000555351 PTPRCP08575 1304 aa15.02■□□□□ -0
VRK1-204ENST00000555351 PSME4Q14997 1843 aa15.02■□□□□ -0
VRK1-204ENST00000555351 F6X3S4 739 aa15.02■□□□□ -0
VRK1-204ENST00000555351 H7C1D1 291 aa15.02■□□□□ -0
VRK1-204ENST00000555351 GRM8O00222 908 aa15.02■□□□□ -0
VRK1-204ENST00000555351 PSMD14O00487 310 aa15.02■□□□□ -0
VRK1-204ENST00000555351 RIMBP2O15034 1052 aa15.02■□□□□ -0
VRK1-204ENST00000555351 VIL1P09327 827 aaKnown RBP15.02■□□□□ -0
VRK1-204ENST00000555351 CT47B1P0C2W7 299 aaPredicted RBP15.02■□□□□ -0
VRK1-204ENST00000555351 ITGA6P23229 1130 aa15.02■□□□□ -0
VRK1-204ENST00000555351 MAP1SQ66K74 1059 aaPredicted RBP15.02■□□□□ -0
VRK1-204ENST00000555351 PODNQ7Z5L7 613 aa15.02■□□□□ -0
VRK1-204ENST00000555351 TRMT2AQ8IZ69 625 aaKnown RBP15.02■□□□□ -0
VRK1-204ENST00000555351 ANKRD2Q9GZV1 360 aa15.02■□□□□ -0
VRK1-204ENST00000555351 CNOT7Q9UIV1 285 aaKnown RBP15.02■□□□□ -0
VRK1-204ENST00000555351 LEMD3Q9Y2U8 911 aa15.02■□□□□ -0
VRK1-204ENST00000555351 G3V3G9 751 aa15.01□□□□□ -0.01
VRK1-204ENST00000555351 FOXO4P98177 505 aa15.01□□□□□ -0.01
VRK1-204ENST00000555351 ALDH1L2Q3SY69 923 aa15.01□□□□□ -0.01
VRK1-204ENST00000555351 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
VRK1-204ENST00000555351 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
VRK1-204ENST00000555351 CNTNAP1P78357 1384 aa15□□□□□ -0.01
VRK1-204ENST00000555351 ANKRD18BA2A2Z9 1011 aa15□□□□□ -0.01
VRK1-204ENST00000555351 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
VRK1-204ENST00000555351 DOK7Q18PE1 504 aa15□□□□□ -0.01
VRK1-204ENST00000555351 MRPL50Q8N5N7 158 aaKnown RBP15□□□□□ -0.01
VRK1-204ENST00000555351 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
VRK1-204ENST00000555351 SPEF2Q9C093 1822 aa15□□□□□ -0.01
VRK1-204ENST00000555351 UTYO14607 1347 aa14.99□□□□□ -0.01
VRK1-204ENST00000555351 MMP14P50281 582 aa14.99□□□□□ -0.01
VRK1-204ENST00000555351 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
VRK1-204ENST00000555351 FAM161AQ3B820 660 aa14.99□□□□□ -0.01
VRK1-204ENST00000555351 MICALL2Q8IY33 904 aa14.99□□□□□ -0.01
VRK1-204ENST00000555351 AGBL3Q8NEM8 1001 aa14.99□□□□□ -0.01
VRK1-204ENST00000555351 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
VRK1-204ENST00000555351 TRPM7Q96QT4 1865 aa14.99□□□□□ -0.01
VRK1-204ENST00000555351 SCN9AQ15858 1988 aa14.98□□□□□ -0.01
VRK1-204ENST00000555351 RASSF10A6NK89 507 aa14.98□□□□□ -0.01
VRK1-204ENST00000555351 GPR101Q96P66 508 aaPredicted RBP14.98□□□□□ -0.01
VRK1-204ENST00000555351 COA1Q9GZY4 146 aa14.98□□□□□ -0.01
VRK1-204ENST00000555351 HIRAP54198 1017 aaPredicted RBP14.97□□□□□ -0.01
VRK1-204ENST00000555351 BRPF1P55201 1214 aaPredicted RBP14.97□□□□□ -0.01
VRK1-204ENST00000555351 RSBN1LQ6PCB5 846 aaPredicted RBP14.97□□□□□ -0.01
VRK1-204ENST00000555351 SLC4A10Q6U841 1118 aa14.97□□□□□ -0.01
VRK1-204ENST00000555351 C15orf52Q6ZUT6 534 aaKnown RBP14.97□□□□□ -0.01
VRK1-204ENST00000555351 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
VRK1-204ENST00000555351 SSH1Q8WYL5 1049 aa14.97□□□□□ -0.01
VRK1-204ENST00000555351 KCNQ5Q9NR82 932 aa14.97□□□□□ -0.01
VRK1-204ENST00000555351 ZBTB12Q9Y330 459 aaPredicted RBP14.97□□□□□ -0.01
VRK1-204ENST00000555351 ZNF804BA4D1E1 1349 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 USP17L3A6NCW0 530 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 USP17L4A6NCW7 530 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 ZNF280AP59817 542 aaPredicted RBP14.96□□□□□ -0.01
VRK1-204ENST00000555351 CCDC57Q2TAC2 916 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 LMBR1LQ6UX01 489 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 USP17L1Q7RTZ2 530 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 TRPM4Q8TD43 1214 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 GMLQ99445 158 aa14.96□□□□□ -0.01
VRK1-204ENST00000555351 MYO3BQ8WXR4 1341 aa14.95□□□□□ -0.02
VRK1-204ENST00000555351 CHRNDQ07001 517 aa14.95□□□□□ -0.02
VRK1-204ENST00000555351 DEFB115Q30KQ5 88 aa14.95□□□□□ -0.02
VRK1-204ENST00000555351 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
VRK1-204ENST00000555351 HHIPL1Q96JK4 782 aa14.95□□□□□ -0.02
VRK1-204ENST00000555351 MKRN1Q9UHC7 482 aaKnown RBP14.95□□□□□ -0.02
VRK1-204ENST00000555351 A0A1B0GUL6 1792 aa14.94□□□□□ -0.02
VRK1-204ENST00000555351 STRIP1Q5VSL9 837 aa14.94□□□□□ -0.02
VRK1-204ENST00000555351 CST9Q5W186 159 aa14.94□□□□□ -0.02
VRK1-204ENST00000555351 ZNF646O15015 1829 aaPredicted RBP14.94□□□□□ -0.02
VRK1-204ENST00000555351 USP17L8P0C7I0 530 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 KCNJ4P48050 445 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 KIF4BQ2VIQ3 1234 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
VRK1-204ENST00000555351 EPHA10Q5JZY3 1008 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 LDHAL6AQ6ZMR3 332 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 SAMD7Q7Z3H4 446 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 KAZALD1Q96I82 304 aa14.93□□□□□ -0.02
VRK1-204ENST00000555351 TLL2Q9Y6L7 1015 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms