RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 FMR1Q06787 632 aaKnown RBP eCLIP12.73□□□□□ -0.37
HNRNPC-219ENST00000555309 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
HNRNPC-219ENST00000555309 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
HNRNPC-219ENST00000555309 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
HNRNPC-219ENST00000555309 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
HNRNPC-219ENST00000555309 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 IQCA1LA6NCM1 817 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 GMPSP49915 693 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 FOXO4P98177 505 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-219ENST00000555309 UFL1O94874 794 aa12.71□□□□□ -0.37
HNRNPC-219ENST00000555309 CSF1RP07333 972 aa12.71□□□□□ -0.37
HNRNPC-219ENST00000555309 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
HNRNPC-219ENST00000555309 SCN4AP35499 1836 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 SNAP23O00161 211 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 ITGA6P23229 1130 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 CIAPIN1Q6FI81 312 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 VPS33BQ9H267 617 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 PODXL2Q9NZ53 605 aa12.71□□□□□ -0.38
HNRNPC-219ENST00000555309 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 RTL9Q8NET4 1388 aa12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 PSMD14O00487 310 aa12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 ITGBL1O95965 494 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 HSP90B1P14625 803 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
HNRNPC-219ENST00000555309 GRM8O00222 908 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 ECE2O60344 883 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 KLRK1P26718 216 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 TXNRD3Q86VQ6 643 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 CDC5LQ99459 802 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 MYH3P11055 1940 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 ADAMTSL1Q8N6G6 1762 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
HNRNPC-219ENST00000555309 EGFRP00533 1210 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 LMBR1LQ6UX01 489 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 DLK2Q6UY11 383 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 HELBQ8NG08 1087 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 SUCLG2Q96I99 432 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 SRCIN1Q9C0H9 1055 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 TRPM4Q8TD43 1214 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
HNRNPC-219ENST00000555309 PASKQ96RG2 1323 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 TRAF5O00463 557 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 TAF5LO75529 589 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 EYA3Q99504 573 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 SMC4Q9NTJ3 1288 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 CNOT7Q9UIV1 285 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 XDHP47989 1333 aa12.67□□□□□ -0.38
HNRNPC-219ENST00000555309 ALDH1L1O75891 902 aa12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 CCT4P50991 539 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 TNIP1Q15025 636 aa12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 CCDC136Q96JN2 1154 aa12.66□□□□□ -0.38
HNRNPC-219ENST00000555309 CT47B1P0C2W7 299 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 CHRNDQ07001 517 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 TNNQ9UQP3 1299 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 TBC1D10BQ4KMP7 808 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 MPHOSPH8Q99549 860 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 ADARB2Q9NS39 739 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-219ENST00000555309 G3V3G9 751 aa12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-219ENST00000555309 BICC1Q9H694 974 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms