RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TRAK1Q9UPV9 953 aa8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 POTECB2RU33 542 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 SCAMP3O14828 347 aaKnown RBP8.83□□□□□ -1
CKS1BP1-201ENST00000555221 NRLP54845 237 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 ZNF468Q5VIY5 522 aaPredicted RBP8.83□□□□□ -1
CKS1BP1-201ENST00000555221 KIAA0319Q5VV43 1072 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 PI16Q6UXB8 463 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 TMEM87AQ8NBN3 555 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 CRELD1Q96HD1 420 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 AVENQ9NQS1 362 aaPredicted RBP8.83□□□□□ -1
CKS1BP1-201ENST00000555221 PPP4R2Q9NY27 417 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 FAM8A1Q9UBU6 413 aa8.83□□□□□ -1
CKS1BP1-201ENST00000555221 KIF4AO95239 1232 aa8.82□□□□□ -1
CKS1BP1-201ENST00000555221 MX2P20592 715 aa8.82□□□□□ -1
CKS1BP1-201ENST00000555221 GPLD1P80108 840 aa8.82□□□□□ -1
CKS1BP1-201ENST00000555221 SPACA7Q96KW9 195 aa8.82□□□□□ -1
CKS1BP1-201ENST00000555221 NSFL1CQ9UNZ2 370 aaKnown RBP8.82□□□□□ -1
CKS1BP1-201ENST00000555221 SIN3BO75182 1162 aa8.81□□□□□ -1
CKS1BP1-201ENST00000555221 SYT9Q86SS6 491 aa8.81□□□□□ -1
CKS1BP1-201ENST00000555221 TRPM4Q8TD43 1214 aa8.81□□□□□ -1
CKS1BP1-201ENST00000555221 BCO2Q9BYV7 579 aa8.81□□□□□ -1
CKS1BP1-201ENST00000555221 OSBPL7Q9BZF2 842 aa8.81□□□□□ -1
CKS1BP1-201ENST00000555221 EHD4Q9H223 541 aa8.81□□□□□ -1
CKS1BP1-201ENST00000555221 METTL5Q9NRN9 209 aaKnown RBP8.81□□□□□ -1
CKS1BP1-201ENST00000555221 A0A1W2PP55 124 aa8.8□□□□□ -1
CKS1BP1-201ENST00000555221 GRM2Q14416 872 aa8.8□□□□□ -1
CKS1BP1-201ENST00000555221 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
CKS1BP1-201ENST00000555221 NXPE4Q6UWF7 544 aa8.8□□□□□ -1
CKS1BP1-201ENST00000555221 NSUN5Q96P11 429 aaKnown RBP8.8□□□□□ -1
CKS1BP1-201ENST00000555221 H3BM21 787 aa8.79□□□□□ -1
CKS1BP1-201ENST00000555221 MAP2K3P46734 347 aa8.79□□□□□ -1
CKS1BP1-201ENST00000555221 UBE2OQ9C0C9 1292 aaKnown RBP8.79□□□□□ -1
CKS1BP1-201ENST00000555221 LATS2Q9NRM7 1088 aa8.79□□□□□ -1
CKS1BP1-201ENST00000555221 LOC102724428A0A0B4J2F2 783 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 C2CD2LO14523 706 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 USP17L7P0C7H9 530 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 ARAFP10398 606 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 ADH6P28332 368 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 GSTT1P30711 240 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 SIK1P57059 783 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 LDLRAD1Q5T700 205 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 COL13A1Q5TAT6 717 aaPredicted RBP8.78□□□□□ -1
CKS1BP1-201ENST00000555221 PRPF40BQ6NWY9 871 aaKnown RBP8.78□□□□□ -1
CKS1BP1-201ENST00000555221 CEP120Q8N960 986 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 OSMRQ99650 979 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 RBSNQ9H1K0 784 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 IGFLR1Q9H665 355 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 MBIPQ9NS73 344 aa8.78□□□□□ -1
CKS1BP1-201ENST00000555221 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.78□□□□□ -1
CKS1BP1-201ENST00000555221 CTSHP09668 335 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 XRCC5P13010 732 aaKnown RBP8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 ZNF76P36508 570 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 GAS6Q14393 721 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 ZKSCAN3Q9BRR0 538 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 LIN7BQ9HAP6 207 aa8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
CKS1BP1-201ENST00000555221 GHRHP01286 108 aa8.76□□□□□ -1.01
CKS1BP1-201ENST00000555221 VSIG8P0DPA2 414 aa8.76□□□□□ -1.01
CKS1BP1-201ENST00000555221 PCBP4P57723 403 aaKnown RBP8.76□□□□□ -1.01
CKS1BP1-201ENST00000555221 RNF34Q969K3 372 aa8.76□□□□□ -1.01
CKS1BP1-201ENST00000555221 ZFYVE1Q9HBF4 777 aa8.76□□□□□ -1.01
CKS1BP1-201ENST00000555221 DZANK1Q9NVP4 752 aa8.76□□□□□ -1.01
CKS1BP1-201ENST00000555221 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 ST13P50502 369 aaKnown RBP8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 HDLBPQ00341 1268 aaKnown RBP8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 FANCCQ00597 558 aa8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 MLLT1Q03111 559 aaPredicted RBP8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 TAF1CQ15572 869 aaPredicted RBP8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 GLIS3Q8NEA6 775 aa8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 SLC16A10Q8TF71 515 aa8.75□□□□□ -1.01
CKS1BP1-201ENST00000555221 USP31Q70CQ4 1352 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 TMEM238LA0A1B0GVL6 79 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 EIF2AK2P19525 551 aaKnown RBP8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 ZNF787Q6DD87 383 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 TMEM102Q8N9M5 508 aaPredicted RBP8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 TCF12Q99081 682 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 PBX4Q9BYU1 374 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 BHLHE41Q9C0J9 482 aaPredicted RBP8.74□□□□□ -1.01
CKS1BP1-201ENST00000555221 J3QW42 95 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 ACPPP15309 386 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 ADH7P40394 386 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 FCGRTP55899 365 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 HFE2Q6ZVN8 426 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 FAM35AQ86V20 835 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 OXCT2Q9BYC2 517 aaPredicted RBP8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 PPM1HQ9ULR3 514 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 SLC6A14Q9UN76 642 aa8.73□□□□□ -1.01
CKS1BP1-201ENST00000555221 PDE2AO00408 941 aaPredicted RBP8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 ERCC5P28715 1186 aaPredicted RBP8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 PTPN12Q05209 780 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms