RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	ANP32E	Q9BTT0	268 aa		13.3	□□□□□ -0.28
SRSF5-208	ENST00000554929		E9PSI1	815 aa		13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	RNMT	O43148	476 aa	Known RBP	13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	GPR153	Q6NV75	609 aa		13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	TRMT2A	Q8IZ69	625 aa	Known RBP	13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	ZNF710	Q8N1W2	664 aa		13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	EXOC6	Q8TAG9	804 aa		13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	PGAP2	Q9UHJ9	254 aa		13.29	□□□□□ -0.28
SRSF5-208	ENST00000554929	KLRG2	A4D1S0	409 aa	Predicted RBP	13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	FAM205C	A6NFA0	338 aa		13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	FAM177B	A6PVY3	158 aa		13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	IL6ST	P40189	918 aa	Predicted RBP	13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	HIRA	P54198	1017 aa	Predicted RBP	13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	SULT6B1	Q6IMI4	303 aa		13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	ZSWIM6	Q9HCJ5	1215 aa		13.28	□□□□□ -0.28
SRSF5-208	ENST00000554929	TCERG1	O14776	1098 aa	Known RBP	13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	A1BG	P04217	495 aa		13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	GMPS	P49915	693 aa	Predicted RBP	13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	TPTE2	Q6XPS3	522 aa		13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	DZIP3	Q86Y13	1208 aa	Known RBP	13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	TTC5	Q8N0Z6	440 aa		13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	C2orf69	Q8N8R5	385 aa		13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	ZC3H15	Q8WU90	426 aa	Known RBP	13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	GBA2	Q9HCG7	927 aa	Predicted RBP	13.27	□□□□□ -0.29
SRSF5-208	ENST00000554929	C2orf72	A6NCS6	295 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	MS4A1	P11836	297 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	CC2D2B	Q6DHV5	1058 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	TRPM4	Q8TD43	1214 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	BCL2L13	Q9BXK5	485 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	KRTAP3-3	Q9BYR6	98 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	KRTAP3-2	Q9BYR7	98 aa		13.26	□□□□□ -0.29
SRSF5-208	ENST00000554929	SNED1	Q8TER0	1413 aa		13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	APAF1	O14727	1248 aa		13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	PPIP5K2	O43314	1243 aa		13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	TBC1D8	O95759	1140 aa		13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	GTF2E1	P29083	439 aa	Predicted RBP	13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	CXCL9	Q07325	125 aa		13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	RUNDC1	Q96C34	613 aa		13.25	□□□□□ -0.29
SRSF5-208	ENST00000554929	SLC10A3	P09131	477 aa		13.24	□□□□□ -0.29
SRSF5-208	ENST00000554929	AOC3	Q16853	763 aa		13.24	□□□□□ -0.29
SRSF5-208	ENST00000554929	ZNF496	Q96IT1	587 aa	Predicted RBP	13.24	□□□□□ -0.29
SRSF5-208	ENST00000554929	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.24	□□□□□ -0.29
SRSF5-208	ENST00000554929	RIMBP2	O15034	1052 aa		13.23	□□□□□ -0.29
SRSF5-208	ENST00000554929	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
SRSF5-208	ENST00000554929	MRC1	P22897	1456 aa		13.23	□□□□□ -0.29
SRSF5-208	ENST00000554929	PIP4K2A	P48426	406 aa	Predicted RBP	13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	CCDC27	Q2M243	656 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	CLEC4G	Q6UXB4	293 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	KRT26	Q7Z3Y9	468 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	SLC51A	Q86UW1	340 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	WDR63	Q8IWG1	891 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	CCDC146	Q8IYE0	955 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	CNOT7	Q9UIV1	285 aa	Known RBP	13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	ZNRF3	Q9ULT6	936 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	ZNF652	Q9Y2D9	606 aa		13.22	□□□□□ -0.29
SRSF5-208	ENST00000554929	HEG1	Q9ULI3	1381 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	SHTN1	A0MZ66	631 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929		H7C1D1	291 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	GRIPAP1	Q4V328	841 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	ERICH6	Q7L0X2	663 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	CRBN	Q96SW2	442 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	UBR2	Q8IWV8	1755 aa		13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	POLR2A	P24928	1970 aa	Known RBP	13.21	□□□□□ -0.29
SRSF5-208	ENST00000554929	RAD17	O75943	681 aa		13.2	□□□□□ -0.3
SRSF5-208	ENST00000554929	AAMP	Q13685	434 aa		13.2	□□□□□ -0.3
SRSF5-208	ENST00000554929	RPGR	Q92834	1020 aa	Known RBP	13.2	□□□□□ -0.3
SRSF5-208	ENST00000554929	PNN	Q9H307	717 aa	Known RBP	13.2	□□□□□ -0.3
SRSF5-208	ENST00000554929	MKI67	P46013	3256 aa	Known RBP	13.19	□□□□□ -0.3
SRSF5-208	ENST00000554929	ADM5	C9JUS6	153 aa		13.19	□□□□□ -0.3
SRSF5-208	ENST00000554929	GPR25	O00155	361 aa		13.19	□□□□□ -0.3
SRSF5-208	ENST00000554929	SPNS2	Q8IVW8	549 aa		13.19	□□□□□ -0.3
SRSF5-208	ENST00000554929	WWC1	Q8IX03	1113 aa		13.19	□□□□□ -0.3
SRSF5-208	ENST00000554929	CDHR2	Q9BYE9	1310 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	PPEF1	O14829	653 aa	Predicted RBP	13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	PLIN1	O60240	522 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	ANP32A	P39687	249 aa	Known RBP	13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	TNIP1	Q15025	636 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	CRY2	Q49AN0	593 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	ZNF790	Q6PG37	636 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	SAMD7	Q7Z3H4	446 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	RASAL3	Q86YV0	1011 aa		13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	DCPS	Q96C86	337 aa	Known RBP	13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	TMX4	Q9H1E5	349 aa	Predicted RBP	13.18	□□□□□ -0.3
SRSF5-208	ENST00000554929	EN2	P19622	333 aa	Predicted RBP	13.17	□□□□□ -0.3
SRSF5-208	ENST00000554929	PDE3A	Q14432	1141 aa		13.17	□□□□□ -0.3
SRSF5-208	ENST00000554929	INTS3	Q68E01	1043 aa	Known RBP	13.17	□□□□□ -0.3
SRSF5-208	ENST00000554929	NUTM1	Q86Y26	1132 aa		13.17	□□□□□ -0.3
SRSF5-208	ENST00000554929	FKTN	O75072	461 aa		13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	CT47B1	P0C2W7	299 aa	Predicted RBP	13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	MTHFSD	Q2M296	383 aa	Known RBP	13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	ARSI	Q5FYB1	569 aa		13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	RBM26	Q5T8P6	1007 aa	Known RBP	13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	RBM17	Q96I25	401 aa	Known RBP	13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	FMNL2	Q96PY5	1086 aa		13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	VPS33B	Q9H267	617 aa		13.16	□□□□□ -0.3
SRSF5-208	ENST00000554929	PAPPA2	Q9BXP8	1791 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms