RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CPLX1O14810 134 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 MTX1Q13505 466 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 AIDAQ96BJ3 306 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 CTSWP56202 376 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 LRRC2Q9BYS8 371 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 PPFIA3O75145 1194 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 CERKQ8TCT0 537 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 NWD1Q149M9 1564 aa19.6■□□□□ 0.73
PCNX1-209ENST00000554879 AFF2P51816 1311 aa19.59■□□□□ 0.73
PCNX1-209ENST00000554879 CERS3Q8IU89 383 aa19.59■□□□□ 0.73
PCNX1-209ENST00000554879 SNX21Q969T3 373 aa19.59■□□□□ 0.73
PCNX1-209ENST00000554879 ZGPATQ8N5A5 531 aaKnown RBP19.59■□□□□ 0.73
PCNX1-209ENST00000554879 PI4K2BQ8TCG2 481 aa19.59■□□□□ 0.73
PCNX1-209ENST00000554879 CD2BP2O95400 341 aaKnown RBP19.59■□□□□ 0.73
PCNX1-209ENST00000554879 ZSCAN25Q6NSZ9 544 aa19.59■□□□□ 0.73
PCNX1-209ENST00000554879 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.73
PCNX1-209ENST00000554879 PRPF40AO75400 957 aaKnown RBP19.58■□□□□ 0.73
PCNX1-209ENST00000554879 MCMDC2Q4G0Z9 681 aa19.58■□□□□ 0.73
PCNX1-209ENST00000554879 PARP10Q53GL7 1025 aa19.58■□□□□ 0.73
PCNX1-209ENST00000554879 CAVIN4Q5BKX8 364 aa19.58■□□□□ 0.72
PCNX1-209ENST00000554879 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.72
PCNX1-209ENST00000554879 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
PCNX1-209ENST00000554879 KAZALD1Q96I82 304 aa19.58■□□□□ 0.72
PCNX1-209ENST00000554879 SEC62Q99442 399 aaKnown RBP19.58■□□□□ 0.72
PCNX1-209ENST00000554879 CWC22Q9HCG8 908 aaKnown RBP19.58■□□□□ 0.72
PCNX1-209ENST00000554879 USPL1Q5W0Q7 1092 aa19.58■□□□□ 0.72
PCNX1-209ENST00000554879 TPTE2Q6XPS3 522 aa19.58■□□□□ 0.72
PCNX1-209ENST00000554879 TRPC5Q9UL62 973 aaPredicted RBP19.58■□□□□ 0.72
PCNX1-209ENST00000554879 JCADQ9P266 1359 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 ERICH4A6NGS2 130 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 SLC9C2Q5TAH2 1124 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 A0A0D9SFI3 127 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 ADORA1P30542 326 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
PCNX1-209ENST00000554879 PTH1RQ03431 593 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 CCDC171Q6TFL3 1326 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 NECAB1Q8N987 351 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 DDX11Q96FC9 970 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 SEC31BQ9NQW1 1179 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 CIZ1Q9ULV3 898 aaPredicted RBP19.56■□□□□ 0.72
PCNX1-209ENST00000554879 LIMCH1Q9UPQ0 1083 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 JAG2Q9Y219 1238 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 ATP5JP18859 108 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 PTMSP20962 102 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 TDO2P48775 406 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 MAP3K12Q12852 859 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 KLHL34Q8N239 644 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
PCNX1-209ENST00000554879 SRP68Q9UHB9 627 aaKnown RBP19.56■□□□□ 0.72
PCNX1-209ENST00000554879 TRIM37O94972 964 aa19.55■□□□□ 0.72
PCNX1-209ENST00000554879 SUSD4Q5VX71 490 aa19.55■□□□□ 0.72
PCNX1-209ENST00000554879 CREB3L3Q68CJ9 461 aa19.55■□□□□ 0.72
PCNX1-209ENST00000554879 RPGRQ92834 1020 aaKnown RBP19.55■□□□□ 0.72
PCNX1-209ENST00000554879 U3KPZ7 1027 aaPredicted RBP19.55■□□□□ 0.72
PCNX1-209ENST00000554879 KRT32Q14532 448 aa19.55■□□□□ 0.72
PCNX1-209ENST00000554879 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
PCNX1-209ENST00000554879 IMMTQ16891 758 aaKnown RBP19.55■□□□□ 0.72
PCNX1-209ENST00000554879 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
PCNX1-209ENST00000554879 SNAP23O00161 211 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 ANAPC15P60006 121 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 FERMT3Q86UX7 667 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 CTNNA3Q9UI47 895 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 KIF3AQ9Y496 699 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 ZAP70P43403 619 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 SKOR2Q2VWA4 1001 aaPredicted RBP19.54■□□□□ 0.72
PCNX1-209ENST00000554879 SYNE3Q6ZMZ3 975 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 ATP6V1DQ9Y5K8 247 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 CHMP4CQ96CF2 233 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 MTMR7Q9Y216 660 aa19.54■□□□□ 0.72
PCNX1-209ENST00000554879 FIBPO43427 364 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 CAVIN1Q6NZI2 390 aaKnown RBP19.53■□□□□ 0.72
PCNX1-209ENST00000554879 ISCA1Q9BUE6 129 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 RAD50Q92878 1312 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 CHST3Q7LGC8 479 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 AK2P54819 239 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 FOXO4P98177 505 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 PI16Q6UXB8 463 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 KBTBD3Q8NAB2 608 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 TTLL11Q8NHH1 800 aa19.53■□□□□ 0.72
PCNX1-209ENST00000554879 ANKRD1Q15327 319 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.72
PCNX1-209ENST00000554879 IPO4Q8TEX9 1081 aaKnown RBP19.52■□□□□ 0.72
PCNX1-209ENST00000554879 TSC1Q92574 1164 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 RNF113AO15541 343 aaKnown RBP19.52■□□□□ 0.72
PCNX1-209ENST00000554879 OFD1O75665 1012 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 ITPK1Q13572 414 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 FAM196AQ6ZSG2 479 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 PRDM4Q9UKN5 801 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 MINDY4BA8MYZ0 360 aa19.52■□□□□ 0.72
PCNX1-209ENST00000554879 RGPD2P0DJD1 1756 aa19.52■□□□□ 0.71
PCNX1-209ENST00000554879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.71
PCNX1-209ENST00000554879 SLFNL1Q499Z3 407 aa19.52■□□□□ 0.71
PCNX1-209ENST00000554879 GJD4Q96KN9 370 aaPredicted RBP19.52■□□□□ 0.71
PCNX1-209ENST00000554879 NACAP1Q9BZK3 213 aa19.51■□□□□ 0.71
PCNX1-209ENST00000554879 UQCRFS1P1P0C7P4 283 aa19.51■□□□□ 0.71
PCNX1-209ENST00000554879 VPS72Q15906 364 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms