RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PI4KAP2A4QPH2 592 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 H7C1D1 291 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 IGKV5-2P06315 115 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 PI4KAP1Q8N8J0 262 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 HHIPL1Q96JK4 782 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 SEC31BQ9NQW1 1179 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 CNOT7Q9UIV1 285 aaKnown RBP8.48□□□□□ -1.05
SLIRP-203ENST00000554074 AKAP11Q9UKA4 1901 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 FANCIQ9NVI1 1328 aa8.48□□□□□ -1.05
SLIRP-203ENST00000554074 NEURL1BA8MQ27 555 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 H7C1W4 665 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 PSMD14O00487 310 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 ECE2O60344 883 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 ECE1P42892 770 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 HIRAP54198 1017 aaPredicted RBP8.47□□□□□ -1.05
SLIRP-203ENST00000554074 CTSWP56202 376 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 CST9Q5W186 159 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 CDC37L1Q7L3B6 337 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 ANKRD18AQ8IVF6 992 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 CDC5LQ99459 802 aaKnown RBP8.47□□□□□ -1.05
SLIRP-203ENST00000554074 PLA2G12BQ9BX93 195 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 ZC3H12CQ9C0D7 883 aaKnown RBP8.47□□□□□ -1.05
SLIRP-203ENST00000554074 DBNDD1Q9H9R9 158 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 ABT1Q9ULW3 272 aaKnown RBP8.47□□□□□ -1.05
SLIRP-203ENST00000554074 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 XDHP47989 1333 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 WDR33Q9C0J8 1336 aaKnown RBP8.47□□□□□ -1.05
SLIRP-203ENST00000554074 ECM29Q5VYK3 1845 aa8.47□□□□□ -1.05
SLIRP-203ENST00000554074 TRAF5O00463 557 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 RIMBP2O15034 1052 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 FOXN1O15353 648 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 UFL1O94874 794 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 SLC4A2P04920 1241 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 VIL1P09327 827 aaKnown RBP8.46□□□□□ -1.06
SLIRP-203ENST00000554074 ATP2B4P23634 1241 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-203ENST00000554074 MAP2K1Q02750 393 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-203ENST00000554074 FLIIQ13045 1269 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 TTLL11Q8NHH1 800 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 TRPM4Q8TD43 1214 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 BSDC1Q9NW68 430 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-203ENST00000554074 ANKIB1Q9P2G1 1089 aa8.46□□□□□ -1.06
SLIRP-203ENST00000554074 VAMP4O75379 141 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 GCKRQ14397 625 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
SLIRP-203ENST00000554074 G2E3Q7L622 706 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 PODNQ7Z5L7 613 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 SAPCD2Q86UD0 394 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 AGBL3Q8NEM8 1001 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 LINS1Q8NG48 757 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 DNAAF4Q8WXU2 420 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 CAPNS2Q96L46 248 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 GLIS2Q9BZE0 524 aaPredicted RBP8.45□□□□□ -1.06
SLIRP-203ENST00000554074 MYH16Q9H6N6 1097 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 ZBTB12Q9Y330 459 aaPredicted RBP8.45□□□□□ -1.06
SLIRP-203ENST00000554074 MED23Q9ULK4 1368 aa8.45□□□□□ -1.06
SLIRP-203ENST00000554074 CASP8AP2Q9UKL3 1982 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 SHTN1A0MZ66 631 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 G3V3G9 751 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 CELF2O95319 508 aaKnown RBP8.44□□□□□ -1.06
SLIRP-203ENST00000554074 MAP2K2P36507 400 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 CASP7P55210 303 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 ZNF280AP59817 542 aaPredicted RBP8.44□□□□□ -1.06
SLIRP-203ENST00000554074 FMR1Q06787 632 aaKnown RBP eCLIP8.44□□□□□ -1.06
SLIRP-203ENST00000554074 FKBP5Q13451 457 aaPredicted RBP8.44□□□□□ -1.06
SLIRP-203ENST00000554074 DOK7Q18PE1 504 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 DCAF8Q5TAQ9 597 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 UBE3BQ7Z3V4 1068 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 JARID2Q92833 1246 aaPredicted RBP8.44□□□□□ -1.06
SLIRP-203ENST00000554074 GREM2Q9H772 168 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 MINPP1Q9UNW1 487 aa8.44□□□□□ -1.06
SLIRP-203ENST00000554074 CSF1RP07333 972 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 IGHMBP2P38935 993 aaKnown RBP8.43□□□□□ -1.06
SLIRP-203ENST00000554074 MMP14P50281 582 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 EXOSC9Q06265 439 aaKnown RBP8.43□□□□□ -1.06
SLIRP-203ENST00000554074 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 RSBN1LQ6PCB5 846 aaPredicted RBP8.43□□□□□ -1.06
SLIRP-203ENST00000554074 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 DCPSQ96C86 337 aaKnown RBP8.43□□□□□ -1.06
SLIRP-203ENST00000554074 GPR101Q96P66 508 aaPredicted RBP8.43□□□□□ -1.06
SLIRP-203ENST00000554074 CCDC85AQ96PX6 553 aaPredicted RBP8.43□□□□□ -1.06
SLIRP-203ENST00000554074 GMLQ99445 158 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 KCNQ5Q9NR82 932 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 LEMD3Q9Y2U8 911 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 PAPPA2Q9BXP8 1791 aa8.43□□□□□ -1.06
SLIRP-203ENST00000554074 USP17L3A6NCW0 530 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 USP17L4A6NCW7 530 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 CA12O43570 354 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 EGFRP00533 1210 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 HSPA8P11142 646 aaKnown RBP8.42□□□□□ -1.06
SLIRP-203ENST00000554074 ITGA6P23229 1130 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 CCT4P50991 539 aaKnown RBP8.42□□□□□ -1.06
SLIRP-203ENST00000554074 TBC1D10BQ4KMP7 808 aaPredicted RBP8.42□□□□□ -1.06
SLIRP-203ENST00000554074 CYP4F22Q6NT55 531 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms